SLC35D2 ORF clone pFN21AE6373

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE6373

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Clone info.

Species

human

Clone Name

pFN21AE6373 Sequence (with vector) Restriction Map

Product ID

FHC23564

ORF Sequence

DNA sequence (1011 bp)
Protein sequence (337 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6373

Symbol

SLC35D2

Alias : HFRC1, SQV7L, UGTrel8, hfrc

Description

solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2, transcript variant 1

Original Clone ID

oc96373

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1011 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 337 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6717.1 3.1e-144 100.0 SLC35D2 CCDS636.1 4.5e-80 57.7 SLC35D1 CCDS69625.1 9.7e-66 73.9 SLC35D2 CCDS34544.1 1e-13 25.3 SLC35D3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004853 176 313 PF03151 Domain of unknown function DUF250
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 26 ARLLSALFYGTCSFLIVLVNKAL 48 PRIMARY 23 2 55 PSPIFLGIGQMAATIMILYVSKL 77 PRIMARY 23 3 117 LPMFTVLRKFTIPLTLLLETIIL 139 SECONDARY 23 4 145 LNIILSVFAIILGAFIAAGSDLA 167 PRIMARY 23 5 202 YGVLFYNACFMIIPTLIISVSTG 224 SECONDARY 23 6 237 NVVFILQFLLSCFLGFLLMYSTV 259 PRIMARY 23 7 277 KNVSVAYIGILIGGDYIFSLLNF 299 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_008932 337 609182 100.0 100.0 XP_005251731 295 609182 99.6 82.5 NP_055954 355 269250,610804 57.7 92.0 XP_005251732 290 609182 85.8 100.0 NP_001273919 249 609182 73.9 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6373 Download

>KIEE6373  1011 bp
ATGACGGCCGGCGGCCAGGCCGAGGCCGAGGGCGCTGGCGGGGAGCCCGGCGCGGCGCGG
CTGCCCTCGCGGGTGGCCCGGCTGCTGTCGGCGCTCTTCTACGGGACCTGCTCCTTCCTC
ATCGTGCTTGTCAACAAGGCGCTGCTGACCACCTACGGTTTCCCGTCACCAATTTTCCTT
GGAATTGGACAGATGGCAGCCACCATAATGATACTATATGTGTCCAAGCTAAACAAAATC
ATTCACTTCCCTGATTTTGATAAGAAAATTCCTGTAAAGCTGTTTCCTCTGCCTCTCCTC
TACGTTGGAAACCACATAAGTGGATTATCAAGCACAAGTAAATTAAGCCTACCGATGTTC
ACCGTGCTCAGGAAATTCACCATTCCACTTACCTTACTTCTGGAAACCATCATACTTGGG
AAGCAGTATTCACTCAACATCATCCTCAGTGTCTTTGCCATTATTCTCGGGGCTTTCATA
GCAGCTGGGTCTGACCTTGCTTTTAACTTAGAAGGCTATATTTTTGTATTCCTGAATGAT
ATCTTCACAGCAGCAAATGGAGTTTATACCAAACAGAAAATGGACCCAAAGGAGCTAGGG
AAATACGGAGTACTTTTCTACAATGCCTGCTTCATGATTATCCCAACTCTTATTATTAGT
GTCTCCACTGGAGACCTGCAACAGGCTACTGAATTCAACCAATGGAAGAATGTTGTGTTT
ATCCTACAGTTTCTTCTTTCCTGTTTTTTGGGGTTTCTGCTGATGTACTCCACGGTTCTG
TGCAGCTATTACAATTCAGCCCTGACGACAGCAGTGGTTGGAGCCATCAAGAATGTATCC
GTTGCCTACATTGGGATATTAATCGGTGGAGACTACATTTTCTCTTTGTTAAACTTTGTA
GGGTTAAATATTTGCATGGCAGGGGGCTTGAGATATTCCTTTTTAACACTGAGCAGCCAG
TTAAAACCTAAACCTGTGGGTGAAGAAAACATCTGTTTGGATTTGAAGAGC

ORF Protein

Cloned ORF protein sequence for pFN21AE6373 Download

>KIEE6373  337 aa
MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMF
TVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLND
IFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVF
ILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFV
GLNICMAGGLRYSFLTLSSQLKPKPVGEENICLDLKS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6373 Download

>pFN21AE6373  5716 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGACGGCCGGCGGCCAGGCCGAGGCCGAGGGCGC
TGGCGGGGAGCCCGGCGCGGCGCGGCTGCCCTCGCGGGTGGCCCGGCTGCTGTCGGCGCT
CTTCTACGGGACCTGCTCCTTCCTCATCGTGCTTGTCAACAAGGCGCTGCTGACCACCTA
CGGTTTCCCGTCACCAATTTTCCTTGGAATTGGACAGATGGCAGCCACCATAATGATACT
ATATGTGTCCAAGCTAAACAAAATCATTCACTTCCCTGATTTTGATAAGAAAATTCCTGT
AAAGCTGTTTCCTCTGCCTCTCCTCTACGTTGGAAACCACATAAGTGGATTATCAAGCAC
AAGTAAATTAAGCCTACCGATGTTCACCGTGCTCAGGAAATTCACCATTCCACTTACCTT
ACTTCTGGAAACCATCATACTTGGGAAGCAGTATTCACTCAACATCATCCTCAGTGTCTT
TGCCATTATTCTCGGGGCTTTCATAGCAGCTGGGTCTGACCTTGCTTTTAACTTAGAAGG
CTATATTTTTGTATTCCTGAATGATATCTTCACAGCAGCAAATGGAGTTTATACCAAACA
GAAAATGGACCCAAAGGAGCTAGGGAAATACGGAGTACTTTTCTACAATGCCTGCTTCAT
GATTATCCCAACTCTTATTATTAGTGTCTCCACTGGAGACCTGCAACAGGCTACTGAATT
CAACCAATGGAAGAATGTTGTGTTTATCCTACAGTTTCTTCTTTCCTGTTTTTTGGGGTT
TCTGCTGATGTACTCCACGGTTCTGTGCAGCTATTACAATTCAGCCCTGACGACAGCAGT
GGTTGGAGCCATCAAGAATGTATCCGTTGCCTACATTGGGATATTAATCGGTGGAGACTA
CATTTTCTCTTTGTTAAACTTTGTAGGGTTAAATATTTGCATGGCAGGGGGCTTGAGATA
TTCCTTTTTAACACTGAGCAGCCAGTTAAAACCTAAACCTGTGGGTGAAGAAAACATCTG
TTTGGATTTGAAGAGCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTC
GACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGG
CTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGAC
ATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGC
TTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAA
CAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAG
GTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTC
TTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAG
CACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTT
CGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATG
AGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTT
TTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGA
GTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAA
GAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGT
ATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTT
GAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGC
AGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGA
GGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGAT
CGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCT
GTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCC
CGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCG
GCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGC
GGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACG
ACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCA
CTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTC
ACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGT
GAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCC
ATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAA
ACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTC
CTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGG
CGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGC
TGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATC
GTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACA
GGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACT
ACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCG
GAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTT
TTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCT
TTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGA
GATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACG
CTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAG
TGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATC
AGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGT
GATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTA
CTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCG
TAGAGGATCGAGATCT