Result of FASTA (omim) for
pFN21AE6373
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6373, 337 aa
1>>>pF1KE6373 337 - 337 aa - 337 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8047+/-0.000406; mu= 18.7999+/- 0.025
mean_var=65.9353+/-13.949, 0's: 0 Z-trim(110.8): 40 B-trim: 0 in 0/49
Lambda= 0.157948
statistics sampled from 19236 (19276) to 19236 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.574), E-opt: 0.2 (0.226), width: 16
Scan time: 6.580
The best scores are: opt bits E(85289)
NP_008932 (OMIM: 609182) UDP-N-acetylglucosamine/U ( 337) 2155 500.2 2.6e-141
XP_005251731 (OMIM: 609182) PREDICTED: UDP-N-acety ( 295) 1766 411.5 1.1e-114
XP_005251733 (OMIM: 609182) PREDICTED: UDP-N-acety ( 259) 1456 340.8 1.9e-93
XP_005251730 (OMIM: 609182) PREDICTED: UDP-N-acety ( 300) 1456 340.9 2.1e-93
XP_005251735 (OMIM: 609182) PREDICTED: UDP-N-acety ( 219) 1395 326.8 2.6e-89
NP_055954 (OMIM: 269250,610804) UDP-glucuronic aci ( 355) 1236 290.8 3e-78
XP_005251732 (OMIM: 609182) PREDICTED: UDP-N-acety ( 290) 1130 266.6 4.8e-71
NP_001273919 (OMIM: 609182) UDP-N-acetylglucosamin ( 249) 1029 243.5 3.6e-64
XP_011516466 (OMIM: 609182) PREDICTED: UDP-N-acety ( 280) 910 216.4 5.7e-56
XP_011539372 (OMIM: 269250,610804) PREDICTED: UDP- ( 382) 833 199.0 1.4e-50
XP_006710541 (OMIM: 269250,610804) PREDICTED: UDP- ( 382) 833 199.0 1.4e-50
XP_006717002 (OMIM: 609182) PREDICTED: UDP-N-acety ( 202) 747 179.2 6.8e-45
NP_001008783 (OMIM: 612519) solute carrier family ( 416) 286 74.4 4.9e-13
NP_116322 (OMIM: 615430) transmembrane protein 241 ( 296) 225 60.3 5.8e-09
XP_011524535 (OMIM: 615430) PREDICTED: transmembra ( 330) 225 60.4 6.3e-09
XP_016881533 (OMIM: 615430) PREDICTED: transmembra ( 345) 225 60.4 6.5e-09
XP_016881532 (OMIM: 615430) PREDICTED: transmembra ( 354) 225 60.4 6.7e-09
NP_001138737 (OMIM: 266265,605881) GDP-fucose tran ( 351) 215 58.1 3.2e-08
NP_001138738 (OMIM: 266265,605881) GDP-fucose tran ( 351) 215 58.1 3.2e-08
NP_060859 (OMIM: 266265,605881) GDP-fucose transpo ( 364) 215 58.1 3.3e-08
XP_011518504 (OMIM: 266265,605881) PREDICTED: GDP- ( 195) 152 43.6 0.00043
>>NP_008932 (OMIM: 609182) UDP-N-acetylglucosamine/UDP-g (337 aa)
initn: 2155 init1: 2155 opt: 2155 Z-score: 2657.9 bits: 500.2 E(85289): 2.6e-141
Smith-Waterman score: 2155; 100.0% identity (100.0% similar) in 337 aa overlap (1-337:1-337)
10 20 30 40 50 60
pF1KE6 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 TVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 TVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLND
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 IFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 IFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 ILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 ILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFV
250 260 270 280 290 300
310 320 330
pF1KE6 GLNICMAGGLRYSFLTLSSQLKPKPVGEENICLDLKS
:::::::::::::::::::::::::::::::::::::
NP_008 GLNICMAGGLRYSFLTLSSQLKPKPVGEENICLDLKS
310 320 330
>>XP_005251731 (OMIM: 609182) PREDICTED: UDP-N-acetylglu (295 aa)
initn: 1766 init1: 1766 opt: 1766 Z-score: 2179.7 bits: 411.5 E(85289): 1.1e-114
Smith-Waterman score: 1766; 99.6% identity (100.0% similar) in 278 aa overlap (1-278:1-278)
10 20 30 40 50 60
pF1KE6 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 TVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLND
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 IFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 ILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFV
:::::::::::::::::::::::::::::::::::::.
XP_005 ILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKHGRGLEIFLFNTEQPVKT
250 260 270 280 290
310 320 330
pF1KE6 GLNICMAGGLRYSFLTLSSQLKPKPVGEENICLDLKS
>>XP_005251733 (OMIM: 609182) PREDICTED: UDP-N-acetylglu (259 aa)
initn: 1451 init1: 1451 opt: 1456 Z-score: 1798.7 bits: 340.8 E(85289): 1.9e-93
Smith-Waterman score: 1456; 95.1% identity (97.5% similar) in 244 aa overlap (1-244:1-243)
10 20 30 40 50 60
pF1KE6 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 TVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLND
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 IFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVF
::::::::::::::::::::::::::::::::::::::::::::::::.. . .. :
XP_005 IFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQVSA-DVLHGSVQ
190 200 210 220 230
250 260 270 280 290 300
pF1KE6 ILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFV
.:::
XP_005 LLQFSPDDSSGWSHQAWQGA
240 250
>>XP_005251730 (OMIM: 609182) PREDICTED: UDP-N-acetylglu (300 aa)
initn: 1451 init1: 1451 opt: 1456 Z-score: 1797.8 bits: 340.9 E(85289): 2.1e-93
Smith-Waterman score: 1456; 95.1% identity (97.5% similar) in 244 aa overlap (1-244:1-243)
10 20 30 40 50 60
pF1KE6 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 TVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLND
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 IFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVF
::::::::::::::::::::::::::::::::::::::::::::::::.. . .. :
XP_005 IFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQVSA-DVLHGSVQ
190 200 210 220 230
250 260 270 280 290 300
pF1KE6 ILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFV
.:::
XP_005 LLQFSPDDSSGWSHQECIRCLHWDINRWRLHFLFVKLCRVKYLHGRGLEIFLFNTEQPVK
240 250 260 270 280 290
>>XP_005251735 (OMIM: 609182) PREDICTED: UDP-N-acetylglu (219 aa)
initn: 1395 init1: 1395 opt: 1395 Z-score: 1724.5 bits: 326.8 E(85289): 2.6e-89
Smith-Waterman score: 1395; 100.0% identity (100.0% similar) in 219 aa overlap (119-337:1-219)
90 100 110 120 130 140
pF1KE6 KIPVKLFPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETIILGKQYSLNII
::::::::::::::::::::::::::::::
XP_005 MFTVLRKFTIPLTLLLETIILGKQYSLNII
10 20 30
150 160 170 180 190 200
pF1KE6 LSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKYGVLFYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKYGVLFYN
40 50 60 70 80 90
210 220 230 240 250 260
pF1KE6 ACFMIIPTLIISVSTGDLQQATEFNQWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNSAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ACFMIIPTLIISVSTGDLQQATEFNQWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNSAL
100 110 120 130 140 150
270 280 290 300 310 320
pF1KE6 TTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAGGLRYSFLTLSSQLKPKPVGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAGGLRYSFLTLSSQLKPKPVGE
160 170 180 190 200 210
330
pF1KE6 ENICLDLKS
:::::::::
XP_005 ENICLDLKS
>>NP_055954 (OMIM: 269250,610804) UDP-glucuronic acid/UD (355 aa)
initn: 1219 init1: 1219 opt: 1236 Z-score: 1525.9 bits: 290.8 E(85289): 3e-78
Smith-Waterman score: 1236; 57.7% identity (85.2% similar) in 310 aa overlap (27-336:42-350)
10 20 30 40 50
pF1KE6 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPS
.::.: :::. :::::.:::..::.: :::
NP_055 VKGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPS
20 30 40 50 60 70
60 70 80 90 100 110
pF1KE6 PIFLGIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLS
. .:.:::.::. .:.:.: ....:::.:...: : ::::::: ::.:.:: ::.::.
NP_055 SLCVGLGQMVATVAVLWVGKALRVVKFPDLDRNVPRKTFPLPLLYFGNQITGLFSTKKLN
80 90 100 110 120 130
120 130 140 150 160 170
pF1KE6 LPMFTVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFV
::::::::.:.: .:.. : ..: : .: .: ..:::.:.:::.::.:::::.:::: :.
NP_055 LPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASSDLAFDLEGYAFI
140 150 160 170 180 190
180 190 200 210 220 230
pF1KE6 FLNDIFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWK
..::..:::::.:.:::.: :::::::.:.::: :::.::: :. ::: :.:.::. :
NP_055 LINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTGDAQKAVEFEGWA
200 210 220 230 240 250
240 250 260 270 280 290
pF1KE6 NVVFILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSL
...:.::: ::: .::.:::.::::. :::::::..:: :::. ..:::...::::::.
NP_055 DTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYIGMVFGGDYIFTW
260 270 280 290 300 310
300 310 320 330
pF1KE6 LNFVGLNICMAGGLRYSFLTLSSQLKPKPVGEENICLDLKS
::.:::: .::.: ::..:.. . : .: : ::.:
NP_055 TNFIGLNISIAGSLVYSYITFTEEQLSKQ-SEANNKLDIKGKGAV
320 330 340 350
>>XP_005251732 (OMIM: 609182) PREDICTED: UDP-N-acetylglu (290 aa)
initn: 1856 init1: 1130 opt: 1130 Z-score: 1396.5 bits: 266.6 E(85289): 4.8e-71
Smith-Waterman score: 1765; 85.8% identity (85.8% similar) in 337 aa overlap (1-337:1-290)
10 20 30 40 50 60
pF1KE6 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLR----
70 80 90 100 110
130 140 150 160 170 180
pF1KE6 TVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLND
:::::::::::::::::
XP_005 -------------------------------------------SDLAFNLEGYIFVFLND
120 130
190 200 210 220 230 240
pF1KE6 IFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVF
140 150 160 170 180 190
250 260 270 280 290 300
pF1KE6 ILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFV
200 210 220 230 240 250
310 320 330
pF1KE6 GLNICMAGGLRYSFLTLSSQLKPKPVGEENICLDLKS
:::::::::::::::::::::::::::::::::::::
XP_005 GLNICMAGGLRYSFLTLSSQLKPKPVGEENICLDLKS
260 270 280 290
>>NP_001273919 (OMIM: 609182) UDP-N-acetylglucosamine/UD (249 aa)
initn: 1043 init1: 1025 opt: 1029 Z-score: 1273.0 bits: 243.5 E(85289): 3.6e-64
Smith-Waterman score: 1387; 73.9% identity (73.9% similar) in 337 aa overlap (1-337:1-249)
10 20 30 40 50 60
pF1KE6 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 TVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLND
:::::::::::::::::::::::::::::::::::::::::::
NP_001 TVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAG-----------------
130 140 150 160
190 200 210 220 230 240
pF1KE6 IFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVF
NP_001 ------------------------------------------------------------
250 260 270 280 290 300
pF1KE6 ILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFV
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 -----------FLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFV
170 180 190 200 210
310 320 330
pF1KE6 GLNICMAGGLRYSFLTLSSQLKPKPVGEENICLDLKS
:::::::::::::::::::::::::::::::::::::
NP_001 GLNICMAGGLRYSFLTLSSQLKPKPVGEENICLDLKS
220 230 240
>>XP_011516466 (OMIM: 609182) PREDICTED: UDP-N-acetylglu (280 aa)
initn: 1494 init1: 908 opt: 910 Z-score: 1125.8 bits: 216.4 E(85289): 5.7e-56
Smith-Waterman score: 1376; 71.2% identity (76.3% similar) in 337 aa overlap (1-337:1-280)
10 20 30 40 50 60
pF1KE6 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMF
::::::::::::::::::::::::::::::::: . .: . :.:
XP_011 GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKPTDVHRAQEIHHSTYLTS---------
70 80 90 100 110
130 140 150 160 170 180
pF1KE6 TVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLND
:.... . ... . : :
XP_011 -------------------GNHHTWEAVFT-------------QHHPQCLCHY-------
120 130
190 200 210 220 230 240
pF1KE6 IFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVF
. : ... :::::::::::::::::::::::::::::::::::::::::::
XP_011 ----SRGFHSSW-----ELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVF
140 150 160 170 180
250 260 270 280 290 300
pF1KE6 ILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFV
190 200 210 220 230 240
310 320 330
pF1KE6 GLNICMAGGLRYSFLTLSSQLKPKPVGEENICLDLKS
:::::::::::::::::::::::::::::::::::::
XP_011 GLNICMAGGLRYSFLTLSSQLKPKPVGEENICLDLKS
250 260 270 280
>>XP_011539372 (OMIM: 269250,610804) PREDICTED: UDP-gluc (382 aa)
initn: 1215 init1: 831 opt: 833 Z-score: 1029.1 bits: 199.0 E(85289): 1.4e-50
Smith-Waterman score: 1177; 53.4% identity (78.3% similar) in 337 aa overlap (27-336:42-377)
10 20 30 40 50
pF1KE6 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPS
.::.: :::. :::::.:::..::.: :::
XP_011 VKGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPS
20 30 40 50 60 70
60 70 80 90 100 110
pF1KE6 PIFLGIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLS
. .:.:::.::. .:.:.: ....:::.:...: : ::::::: ::.:.:: ::.::.
XP_011 SLCVGLGQMVATVAVLWVGKALRVVKFPDLDRNVPRKTFPLPLLYFGNQITGLFSTKKLN
80 90 100 110 120 130
120 130 140 150 160 170
pF1KE6 LPMFTVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFV
::::::::.:.: .:.. : ..: : .: .: ..:::.:.:::.::.:::::.:::: :.
XP_011 LPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASSDLAFDLEGYAFI
140 150 160 170 180 190
180 190 200 210 220
pF1KE6 FLNDIFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQ---------
..::..:::::.:.:::.: :::::::.:.::: :::.::: :. ::: :
XP_011 LINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTGDAQKLPVSQDRR
200 210 220 230 240 250
230 240 250 260
pF1KE6 ------------------QATEFNQWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNSALT
::.::. : ...:.::: ::: .::.:::.::::. ::::::
XP_011 FQALWQRACLVLCHTQNDQAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALT
260 270 280 290 300 310
270 280 290 300 310 320
pF1KE6 TAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAGGLRYSFLTLSSQLKPKPVGEE
:..:: :::. ..:::...::::::. ::.:::: .::.: ::..:.. . : .:
XP_011 TTIVGCIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQLSKQ-SEA
320 330 340 350 360 370
330
pF1KE6 NICLDLKS
: ::.:
XP_011 NNKLDIKGKGAV
380
337 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 12:41:36 2016 done: Tue Nov 8 12:41:37 2016
Total Scan time: 6.580 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]