DDX55 ORF clone pFN21AE5770

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE5770

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Clone info.

Species

human

Clone Name

pFN21AE5770 Sequence (with vector) Restriction Map

Product ID

FHC16537

ORF Sequence

DNA sequence (1800 bp)
Protein sequence (600 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5770

Symbol

DDX55

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 55

Original Clone ID

oc95770

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1800 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 600 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9251.1 9.4e-164 100.0 DDX55 CCDS8342.1 1.2e-27 36.3 DDX10 CCDS2120.1 5.6e-25 35.9 DDX18 CCDS8655.1 1.4e-17 37.0 DDX47 CCDS4977.1 7.9e-17 31.8 DDX43 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR011545 33 212 PF00270 DNA/RNA helicase IPR001650 292 363 PF00271 Helicase HMMSmart IPR014001 28 245 SM00487 DEAD-like helicase IPR001650 281 363 SM00490 Helicase ProfileScan IPR014014 9 37 PS51195 RNA helicase IPR014001 40 223 PS51192 DEAD-like helicase IPR001650 254 402 PS51194 Helicase
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004389 875 601235 36.3 92.3 NP_006764 670 606355 35.9 85.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5770 Download

>KIEE5770  1800 bp
ATGGAGCATGTGACAGAGGGCTCCTGGGAGTCGCTGCCTGTGCCGCTGCACCCGCAGGTG
CTGGGCGCGCTGCGGGAGCTGGGCTTCCCGTACATGACGCCGGTGCAGTCCGCAACCATC
CCTCTGTTCATGCGAAACAAAGATGTCGCTGCAGAAGCGGTCACAGGTAGTGGCAAAACA
CTCGCTTTTGTCATCCCCATCCTGGAAATTCTTCTGAGAAGAGAAGAGAAGTTAAAAAAG
AGTCAGGTTGGAGCCATAATCATCACCCCCACTCGAGAGCTGGCCATTCAAATAGACGAG
GTCCTGTCGCATTTCACGAAGCACTTCCCCGAGTTCAGCCAGATTCTTTGGATCGGAGGC
AGGAATCCTGGAGAAGATGTTGAGAGGTTTAAGCAACAAGGTGGGAACATCATTGTGGCC
ACTCCAGGCCGCTTGGAGGACATGTTCCGGAGGAAGGCCGAAGGCTTGGATCTGGCCAGC
TGTGTGCGATCCCTGGATGTCCTGGTGTTGGATGAGGCAGACAGACTTCTGGACATGGGG
TTTGAGGCAAGCATCAACACCATTCTGGAGTTTTTGCCAAAGCAGAGGAGAACAGGCCTT
TTCTCTGCCACTCAGACGCAGGAAGTGGAGAACCTGGTGAGAGCGGGCCTCCGGAACCCT
GTCCGGGTCTCAGTGAAGGAGAAGGGCGTGGCAGCCAGCAGTGCCCAGAAGACCCCCTCC
CGCCTGGAAAACTACTACATGGTATGCAAGGCAGATGAGAAATTTAATCAGCTGGTCCAT
TTTCTTCGCAATCATAAGCAGGAGAAACACCTGGTCTTCTTCAGCACCTGTGCCTGTGTG
GAATACTATGGGAAGGCTCTGGAAGTGCTGGTGAAGGGCGTGAAGATTATGTGCATTCAC
GGAAAGATGAAATATAAACGCAATAAGATCTTCATGGAGTTCCGCAAATTGCAAAGTGGG
ATTTTAGTGTGCACTGATGTGATGGCCCGGGGAATTGATATTCCTGAAGTCAACTGGGTT
TTGCAGTATGACCCTCCCAGCAATGCAAGTGCCTTCGTGCATCGCTGCGGTCGCACAGCT
CGCATTGGCCACGGGGGCAGCGCTCTGGTGTTCCTCCTGCCCATGGAAGAGTCATACATC
AATTTCCTTGCAATTAACCAAAAATGCCCCCTGCAGGAGATGAAGCCCCAGAGAAACACA
GCGGACCTTCTGCCAAAACTCAAGTCCATGGCCCTGGCTGACAGAGCTGTGTTTGAAAAG
GGCATGAAAGCTTTTGTGTCATATGTCCAAGCTTATGCAAAGCATGAATGCAACCTGATT
TTCAGATTAAAGGATCTTGATTTTGCCAGCCTTGCTCGAGGTTTTGCCCTGCTGAGGATG
CCCAAGATGCCAGAATTGAGAGGAAAGCAGTTTCCAGATTTTGTGCCCGTGGACGTTAAT
ACCGACACGATTCCATTTAAAGATAAAATCAGAGAAAAGCAGAGGCAGAAACTCCTGGAG
CAACAAAGAAGAGAGAAAACAGAAAATGAAGGGAGAAGAAAATTCATAAAAAATAAAGCT
TGGTCAAAGCAGAAGGCCAAAAAAGAAAAGAAGAAAAAAATGAATGAGAAAAGGAAAAGG
GAAGAGGGTTCTGATATTGAAGATGAGGACATGGAAGAACTTCTTAATGACACAAGACTC
TTGAAAAAACTTAAGAAAGGCAAAATAACTGAAGAAGAATTTGAGAAGGGCTTGTTGACA
ACTGGCAAAAGAACAATCAAGACAGTGGATTTAGGGATCTCAGATTTGGAAGATGACTGC

ORF Protein

Cloned ORF protein sequence for pFN21AE5770 Download

>KIEE5770  600 aa
MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGG
RNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPS
RLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIH
GKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
RIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADLLPKLKSMALADRAVFEK
GMKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVN
TDTIPFKDKIREKQRQKLLEQQRREKTENEGRRKFIKNKAWSKQKAKKEKKKKMNEKRKR
EEGSDIEDEDMEELLNDTRLLKKLKKGKITEEEFEKGLLTTGKRTIKTVDLGISDLEDDC

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5770 Download

>pFN21AE5770  6505 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAGCATGTGACAGAGGGCTCCTGGGAGTCGCT
GCCTGTGCCGCTGCACCCGCAGGTGCTGGGCGCGCTGCGGGAGCTGGGCTTCCCGTACAT
GACGCCGGTGCAGTCCGCAACCATCCCTCTGTTCATGCGAAACAAAGATGTCGCTGCAGA
AGCGGTCACAGGTAGTGGCAAAACACTCGCTTTTGTCATCCCCATCCTGGAAATTCTTCT
GAGAAGAGAAGAGAAGTTAAAAAAGAGTCAGGTTGGAGCCATAATCATCACCCCCACTCG
AGAGCTGGCCATTCAAATAGACGAGGTCCTGTCGCATTTCACGAAGCACTTCCCCGAGTT
CAGCCAGATTCTTTGGATCGGAGGCAGGAATCCTGGAGAAGATGTTGAGAGGTTTAAGCA
ACAAGGTGGGAACATCATTGTGGCCACTCCAGGCCGCTTGGAGGACATGTTCCGGAGGAA
GGCCGAAGGCTTGGATCTGGCCAGCTGTGTGCGATCCCTGGATGTCCTGGTGTTGGATGA
GGCAGACAGACTTCTGGACATGGGGTTTGAGGCAAGCATCAACACCATTCTGGAGTTTTT
GCCAAAGCAGAGGAGAACAGGCCTTTTCTCTGCCACTCAGACGCAGGAAGTGGAGAACCT
GGTGAGAGCGGGCCTCCGGAACCCTGTCCGGGTCTCAGTGAAGGAGAAGGGCGTGGCAGC
CAGCAGTGCCCAGAAGACCCCCTCCCGCCTGGAAAACTACTACATGGTATGCAAGGCAGA
TGAGAAATTTAATCAGCTGGTCCATTTTCTTCGCAATCATAAGCAGGAGAAACACCTGGT
CTTCTTCAGCACCTGTGCCTGTGTGGAATACTATGGGAAGGCTCTGGAAGTGCTGGTGAA
GGGCGTGAAGATTATGTGCATTCACGGAAAGATGAAATATAAACGCAATAAGATCTTCAT
GGAGTTCCGCAAATTGCAAAGTGGGATTTTAGTGTGCACTGATGTGATGGCCCGGGGAAT
TGATATTCCTGAAGTCAACTGGGTTTTGCAGTATGACCCTCCCAGCAATGCAAGTGCCTT
CGTGCATCGCTGCGGTCGCACAGCTCGCATTGGCCACGGGGGCAGCGCTCTGGTGTTCCT
CCTGCCCATGGAAGAGTCATACATCAATTTCCTTGCAATTAACCAAAAATGCCCCCTGCA
GGAGATGAAGCCCCAGAGAAACACAGCGGACCTTCTGCCAAAACTCAAGTCCATGGCCCT
GGCTGACAGAGCTGTGTTTGAAAAGGGCATGAAAGCTTTTGTGTCATATGTCCAAGCTTA
TGCAAAGCATGAATGCAACCTGATTTTCAGATTAAAGGATCTTGATTTTGCCAGCCTTGC
TCGAGGTTTTGCCCTGCTGAGGATGCCCAAGATGCCAGAATTGAGAGGAAAGCAGTTTCC
AGATTTTGTGCCCGTGGACGTTAATACCGACACGATTCCATTTAAAGATAAAATCAGAGA
AAAGCAGAGGCAGAAACTCCTGGAGCAACAAAGAAGAGAGAAAACAGAAAATGAAGGGAG
AAGAAAATTCATAAAAAATAAAGCTTGGTCAAAGCAGAAGGCCAAAAAAGAAAAGAAGAA
AAAAATGAATGAGAAAAGGAAAAGGGAAGAGGGTTCTGATATTGAAGATGAGGACATGGA
AGAACTTCTTAATGACACAAGACTCTTGAAAAAACTTAAGAAAGGCAAAATAACTGAAGA
AGAATTTGAGAAGGGCTTGTTGACAACTGGCAAAAGAACAATCAAGACAGTGGATTTAGG
GATCTCAGATTTGGAAGATGACTGCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCC
TCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAG
CTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTT
CGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGA
AAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGC
TGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAG
ATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAA
TGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATC
CGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGT
GGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGG
AAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGC
CTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG
GGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTT
CGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTA
TTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAAT
GACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGA
GAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACA
ACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACT
CGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACC
ACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACT
CTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTT
CTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGT
GGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTT
ATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATA
GGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGG
TATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAA
AGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGG
CGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGA
GGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCG
TGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGG
GAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTC
GCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCG
GTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCA
CTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGT
GGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAG
TTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCG
GTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATC
CTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTT
TGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAG
GAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAG
TGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTA
AAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTC
TGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAA
ATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATG
CGTCCGGCGTAGAGGATCGAGATCT