RBM47 ORF clone pFN21AE5731

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE5731

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Clone info.

Species

human

Clone Name

pFN21AE5731 Sequence (with vector) Restriction Map

Product ID

FHC21900

ORF Sequence

DNA sequence (1779 bp)
Protein sequence (593 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5731

Symbol

RBM47

Alias : NET18

Description

RNA binding motif protein 47, transcript variant 1

Original Clone ID

oc95731

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1779 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 593 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS43223.1 7e-140 99.8 RBM47 CCDS3460.1 3.8e-88 88.2 RBM47 CCDS7241.1 2.3e-57 51.1 A1CF CCDS7242.1 7.7e-55 50.8 A1CF CCDS7243.1 8.2e-54 49.4 A1CF The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 73 137 PF00076 RNA recognition motif domain IPR000504 153 214 PF00076 RNA recognition motif domain IPR000504 248 311 PF00076 RNA recognition motif domain HMMSmart IPR000504 72 145 SM00360 RNA recognition motif domain IPR000504 152 229 SM00360 RNA recognition motif domain IPR000504 247 314 SM00360 RNA recognition motif domain HMMTigr IPR006535 15 593 TIGR01648 HnRNP R/Q splicing factor ProfileScan IPR000504 71 144 PS50102 RNA recognition motif domain IPR000504 151 233 PS50102 RNA recognition motif domain IPR000504 246 318 PS50102 RNA recognition motif domain Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5731 Download

>KIEE5731  1779 bp
ATGACCGCAGAGGATTCCACCGCAGCCATGAGCAGTGACTCGGCCGCCGGGTCCTCGGCC
AAGGTGCCCGAGGGCGTGGCGGGCGCGCCCAACGAGGCAGCACTGCTGGCGCTGATGGAG
CGCACGGGCTACAGCATGGTGCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCACCGCCC
GGCTGGGAGGGCCCGCACCCGCAGCGTGGCTGCGAGGTCTTCGTGGGCAAGATCCCGCGC
GACGTGTACGAGGACGAGCTGGTGCCCGTGTTCGAGGCCGTGGGCCGCATCTACGAGCTG
CGCCTCATGATGGACTTTGACGGCAAGAACCGCGGCTACGCCTTCGTCATGTACTGCCAC
AAGCACGAGGCCAAGCGCGCAGTGCGTGAGCTCAACAACTACGAGATCCGCCCGGGCCGC
CTGCTCGGCGTGTGCTGCAGCGTGGACAACTGCCGCCTCTTCATCGGCGGGATCCCCAAG
ATGAAGAAGCGCGAGGAAATCCTGGAGGAGATTGCCAAGGTCACCGAGGGCGTGCTGGAC
GTGATCGTCTACGCCAGCGCGGCCGACAAGATGAAGAACCGCGGCTTCGCCTTCGTGGAG
TACGAGAGCCACCGCGCGGCTGCCATGGCTCGCCGCAAGCTCATGCCTGGCCGCATCCAG
CTGTGGGGCCACCAGATCGCCGTGGACTGGGCCGAACCTGAGATCGACGTGGACGAGGAC
GTGATGGAGACCGTGAAGATCCTCTACGTGCGCAACCTCATGATCGAGACCACCGAGGAC
ACCATCAAGAAGAGCTTCGGCCAGTTCAACCCCGGCTGCGTGGAGCGCGTCAAGAAGATC
CGCGACTACGCCTTCGTGCACTTCACCAGCCGCGAGGATGCCGTGCATGCCATGAACAAC
CTCAACGGCACTGAGCTGGAGGGCTCGTGCCTGGAGGTCACGCTGGCCAAGCCCGTGGAC
AAGGAGCAGTACTCGCGCTACCAGAAGGCAGCCAGGGGCGGCGGCGCGGCTGAGGCAGCG
CAGCAGCCCAGCTACGTGTACTCCTGCGACCCCTACACACTGGCCTACTACGGCTACCCC
TACAACGCGCTCATTGGGCCCAACAGGGACTACTTTGTGAAAGCAGGCAGCATAAGAGGC
CGAGGGCGAGGTGCAGCTGGCAACAGAGCCCCAGGGCCTAGGGGTTCCTACCTCGGGGGA
TATTCTGCTGGCCGTGGTATATATAGCCGATATCATGAAGGGAAAGGAAAGCAGCAAGAA
AAAGGATATGAACTGGTGCCGAATTTGGAAATCCCTACCGTCAACCCAGTTGCCATTAAA
CCTGGTACAGTAGCCATCCCTGCCATTGGGGCTCAGTATTCCATGTTTCCAGCAGCTCCA
GCCCCTAAAATGATTGAAGATGGCAAAATCCACACAGTGGAGCACATGATCAGCCCCATT
GCTGTGCAGCCAGACCCAGCCAGTGCTGCTGCCGCCGCAGCCGCGGCCGCAGCCGCCGCA
GCCGCTGTCATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGCCCAATAACTCCA
GTATACACGGTGGCTCCAAACGTTCAGAGAATTCCTACTGCCGGGATCTACGGGGCCAGT
TACGTGCCATTTGCTGCTCCAGCTACAGCCACGATCGCCACACTACAGAAGAACGCGGCA
GCCGCGGCCGCCGTGTATGGAGGATACGCAGGCTACATACCTCAGGCCTTCCCTGCTGCT
GCCATTCAGGTCCCCATCCCCGACGTCTACCAGACATAC

ORF Protein

Cloned ORF protein sequence for pFN21AE5731 Download

>KIEE5731  593 aa
MTAEDSTAAMSSDSAAGSSAKVPEGVAGAPNEAALLALMERTGYSMVQENGQRKYGGPPP
GWEGPHPQRGCEVFVGKIPRDVYEDELVPVFEAVGRIYELRLMMDFDGKNRGYAFVMYCH
KHEAKRAVRELNNYEIRPGRLLGVCCSVDNCRLFIGGIPKMKKREEILEEIAKVTEGVLD
VIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVDED
VMETVKILYVRNLMIETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNN
LNGTELEGSCLEVTLAKPVDKEQYSRYQKAARGGGAAEAAQQPSYVYSCDPYTLAYYGYP
YNALIGPNRDYFVKAGSIRGRGRGAAGNRAPGPRGSYLGGYSAGRGIYSRYHEGKGKQQE
KGYELVPNLEIPTVNPVAIKPGTVAIPAIGAQYSMFPAAPAPKMIEDGKIHTVEHMISPI
AVQPDPASAAAAAAAAAAAAAAVIPTVSTPPPFQGRPITPVYTVAPNVQRIPTAGIYGAS
YVPFAAPATATIATLQKNAAAAAAVYGGYAGYIPQAFPAAAIQVPIPDVYQTY

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5731 Download

>pFN21AE5731  6484 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGACCGCAGAGGATTCCACCGCAGCCATGAGCAG
TGACTCGGCCGCCGGGTCCTCGGCCAAGGTGCCCGAGGGCGTGGCGGGCGCGCCCAACGA
GGCAGCACTGCTGGCGCTGATGGAGCGCACGGGCTACAGCATGGTGCAAGAGAACGGGCA
GCGCAAGTACGGCGGCCCACCGCCCGGCTGGGAGGGCCCGCACCCGCAGCGTGGCTGCGA
GGTCTTCGTGGGCAAGATCCCGCGCGACGTGTACGAGGACGAGCTGGTGCCCGTGTTCGA
GGCCGTGGGCCGCATCTACGAGCTGCGCCTCATGATGGACTTTGACGGCAAGAACCGCGG
CTACGCCTTCGTCATGTACTGCCACAAGCACGAGGCCAAGCGCGCAGTGCGTGAGCTCAA
CAACTACGAGATCCGCCCGGGCCGCCTGCTCGGCGTGTGCTGCAGCGTGGACAACTGCCG
CCTCTTCATCGGCGGGATCCCCAAGATGAAGAAGCGCGAGGAAATCCTGGAGGAGATTGC
CAAGGTCACCGAGGGCGTGCTGGACGTGATCGTCTACGCCAGCGCGGCCGACAAGATGAA
GAACCGCGGCTTCGCCTTCGTGGAGTACGAGAGCCACCGCGCGGCTGCCATGGCTCGCCG
CAAGCTCATGCCTGGCCGCATCCAGCTGTGGGGCCACCAGATCGCCGTGGACTGGGCCGA
ACCTGAGATCGACGTGGACGAGGACGTGATGGAGACCGTGAAGATCCTCTACGTGCGCAA
CCTCATGATCGAGACCACCGAGGACACCATCAAGAAGAGCTTCGGCCAGTTCAACCCCGG
CTGCGTGGAGCGCGTCAAGAAGATCCGCGACTACGCCTTCGTGCACTTCACCAGCCGCGA
GGATGCCGTGCATGCCATGAACAACCTCAACGGCACTGAGCTGGAGGGCTCGTGCCTGGA
GGTCACGCTGGCCAAGCCCGTGGACAAGGAGCAGTACTCGCGCTACCAGAAGGCAGCCAG
GGGCGGCGGCGCGGCTGAGGCAGCGCAGCAGCCCAGCTACGTGTACTCCTGCGACCCCTA
CACACTGGCCTACTACGGCTACCCCTACAACGCGCTCATTGGGCCCAACAGGGACTACTT
TGTGAAAGCAGGCAGCATAAGAGGCCGAGGGCGAGGTGCAGCTGGCAACAGAGCCCCAGG
GCCTAGGGGTTCCTACCTCGGGGGATATTCTGCTGGCCGTGGTATATATAGCCGATATCA
TGAAGGGAAAGGAAAGCAGCAAGAAAAAGGATATGAACTGGTGCCGAATTTGGAAATCCC
TACCGTCAACCCAGTTGCCATTAAACCTGGTACAGTAGCCATCCCTGCCATTGGGGCTCA
GTATTCCATGTTTCCAGCAGCTCCAGCCCCTAAAATGATTGAAGATGGCAAAATCCACAC
AGTGGAGCACATGATCAGCCCCATTGCTGTGCAGCCAGACCCAGCCAGTGCTGCTGCCGC
CGCAGCCGCGGCCGCAGCCGCCGCAGCCGCTGTCATTCCCACTGTGTCGACGCCACCACC
TTTCCAGGGCCGCCCAATAACTCCAGTATACACGGTGGCTCCAAACGTTCAGAGAATTCC
TACTGCCGGGATCTACGGGGCCAGTTACGTGCCATTTGCTGCTCCAGCTACAGCCACGAT
CGCCACACTACAGAAGAACGCGGCAGCCGCGGCCGCCGTGTATGGAGGATACGCAGGCTA
CATACCTCAGGCCTTCCCTGCTGCTGCCATTCAGGTCCCCATCCCCGACGTCTACCAGAC
ATACGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCA
TGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCG
CTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATAC
ATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAA
ATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAAC
AACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGC
AAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCG
TTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGC
GGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTG
CGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGA
CAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACAT
TTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCA
GAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATC
GAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCA
ATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGG
CAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCA
GTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATA
ACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAG
CTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCG
GAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCA
ACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTA
ATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCT
GGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCA
GCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAG
GCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCAT
TGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGG
TAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCC
AGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCC
CCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGAC
TATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCC
TGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATA
GCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGC
ACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCA
ACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAG
CGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTA
GAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTG
GTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGC
AGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGT
CTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAA
GGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCT
TCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGT
GGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGC
GGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAA
CGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTC
GTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAG
ATCT