APBA3 ORF clone pFN21AE5684

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE5684

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Clone info.

Species

human

Clone Name

pFN21AE5684 Sequence (with vector) Restriction Map

Product ID

FHC26393

ORF Sequence

DNA sequence (1725 bp)
Protein sequence (575 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5684

Symbol

APBA3

Alias : MGC:15815, X11L2, mint3

Description

amyloid beta (A4) precursor protein-binding, family A, member 3

Original Clone ID

oc95684

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1725 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 575 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12110.1 9.3e-140 100.0 APBA3 CCDS6630.1 1.3e-37 51.8 APBA1 CCDS45197.1 1.5e-36 47.7 APBA2 CCDS10022.1 1.5e-36 47.8 APBA2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR006020 221 359 PF00640 Phosphotyrosine interaction domain IPR001478 394 477 PF00595 PDZ/DHR/GLGF IPR001478 489 557 PF00595 PDZ/DHR/GLGF HMMSmart IPR006020 216 362 SM00462 Phosphotyrosine interaction domain IPR001478 403 481 SM00228 PDZ/DHR/GLGF IPR001478 495 561 SM00228 PDZ/DHR/GLGF ProfileScan IPR006020 217 364 PS01179 Phosphotyrosine interaction domain IPR001478 394 479 PS50106 PDZ/DHR/GLGF IPR001478 485 561 PS50106 PDZ/DHR/GLGF
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004877 575 604262 100.0 100.0 XP_006723013 650 604262 99.8 88.0 XP_005252025 826 602414 52.8 92.2 XP_016870159 837 602414 51.8 92.2 NP_001154 837 602414 51.8 92.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5684 Download

>KIEE5684  1725 bp
ATGGACTTCCCCACAATTTCCCGATCCCCTTCGGGGCCTCCAGCCATGGACTTGGAGGGG
CCCAGGGACATTCTTGTGCCTTCGGAGGACCTCACCCCTGACAGCCAGTGGGACCCTATG
CCAGGAGGCCCCGGCAGCCTCAGTCGGATGGAACTTGATGAGTCAAGCCTTCAGGAGCTG
GTGCAGCAGTTTGAAGCTCTGCCAGGCGATCTGGTGGGCCCATCCCCAGGTGGAGCCCCC
TGTCCCCTACACATTGCCACAGGCCATGGCCTGGCCTCCCAGGAGATTGCTGATGCCCAC
GGGCTCCTGTCTGCCGAAGCTGGCCGGGATGACCTGCTGGGCCTCTTGCACTGCGAGGAA
TGCCCGCCTTCCCAGACTGGTCCTGAAGAGCCTCTAGAGCCTGCCCCCCGACTGTTGCAG
CCCCCTGAGGACCCAGATGAGGATTCTGACTCCCCAGAATGGGTGGAGGGGGCCTCTGCT
GAGCAGGAGGGCAGCAGGAGCTCAAGCAGTTCCCCGGAACCCTGGCTGGAGACGGTGCCT
CTAGTCACACCTGAAGAGCCACCCGCTGGTGCCCAGAGCCCCGAGACCCTGGCTTCCTAC
CCTGCCCCCCAGGAGGTGCCTGGTCCCTGTGACCATGAAGACCTCCTGGACGGTGTCATA
TTTGGGGCCAGGTACCTGGGGTCCACCCAGCTGGTGTCGGAACGGAACCCGCCCACCAGC
ACGCGCATGGCCCAGGCCCGGGAGGCCATGGACCGCGTCAAGGCCCCCGATGGGGAGACC
CAGCCCATGACGGAGGTGGACCTGTTCGTCTCCACCAAGAGGATCAAGGTCTTGACAGCG
GACTCCCAGGAGGCCATGATGGACCACGCCCTGCATACCATCTCCTACACAGCCGACATC
GGCTGCGTGCTGGTGCTGATGGCGCGGCGGCGGCTGGCACGGAGGCCGGCACCCCAGGAC
CACGGCCGCCGCCTCTACAAGATGCTCTGCCACGTATTCTACGCGGAGGACGCCCAGCTC
ATCGCCCAGGCCATTGGCCAGGCCTTCGCCGCCGCCTACAGCCAGTTCCTACGGGAAAGC
GGTATTGACCCCAGCCAGGTGGGCGTGCACCCGAGCCCAGGCGCCTGCCACCTCCATAAT
GGGGACCTGGACCACTTCTCCAACAGTGACAACTGCCGGGAGGTGCACCTCGAGAAGCGG
CGAGGGGAGGGCCTGGGCGTGGCCCTGGTGGAGTCGGGCTGGGGCTCCCTGCTGCCCACA
GCCGTCATCGCCAACCTGCTGCACGGGGGGCCTGCTGAGCGCTCGGGGGCCCTCAGCATC
GGGGACCGCCTGACCGCCATCAACGGGACCAGCCTGGTGGGGCTGCCCCTGGCTGCGTGC
CAGGCCGCTGTCCGCGAGACGAAGTCGCAGACGTCGGTGACACTCAGCATCGTCCACTGC
CCTCCCGTCACCACCGCCATCATCCACCGGCCCCACGCCCGCGAGCAGCTGGGCTTCTGC
GTGGAGGACGGCATCATCTGCAGCCTCCTCCGTGGTGGCATCGCCGAGCGTGGGGGCATC
CGCGTCGGCCACCGCATCATTGAGATCAATGGGCAGAGTGTGGTGGCCACGCCACACGCC
CGCATCATCGAGCTGCTCACCGAGGCCTATGGCGAGGTGCATATCAAGACGATGCCAGCT
GCCACATATCGCCTCCTTACAGGCCAGGAGCAGCCCGTGTACCTG

ORF Protein

Cloned ORF protein sequence for pFN21AE5684 Download

>KIEE5684  575 aa
MDFPTISRSPSGPPAMDLEGPRDILVPSEDLTPDSQWDPMPGGPGSLSRMELDESSLQEL
VQQFEALPGDLVGPSPGGAPCPLHIATGHGLASQEIADAHGLLSAEAGRDDLLGLLHCEE
CPPSQTGPEEPLEPAPRLLQPPEDPDEDSDSPEWVEGASAEQEGSRSSSSSPEPWLETVP
LVTPEEPPAGAQSPETLASYPAPQEVPGPCDHEDLLDGVIFGARYLGSTQLVSERNPPTS
TRMAQAREAMDRVKAPDGETQPMTEVDLFVSTKRIKVLTADSQEAMMDHALHTISYTADI
GCVLVLMARRRLARRPAPQDHGRRLYKMLCHVFYAEDAQLIAQAIGQAFAAAYSQFLRES
GIDPSQVGVHPSPGACHLHNGDLDHFSNSDNCREVHLEKRRGEGLGVALVESGWGSLLPT
AVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHC
PPVTTAIIHRPHAREQLGFCVEDGIICSLLRGGIAERGGIRVGHRIIEINGQSVVATPHA
RIIELLTEAYGEVHIKTMPAATYRLLTGQEQPVYL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5684 Download

>pFN21AE5684  6430 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGACTTCCCCACAATTTCCCGATCCCCTTCGGG
GCCTCCAGCCATGGACTTGGAGGGGCCCAGGGACATTCTTGTGCCTTCGGAGGACCTCAC
CCCTGACAGCCAGTGGGACCCTATGCCAGGAGGCCCCGGCAGCCTCAGTCGGATGGAACT
TGATGAGTCAAGCCTTCAGGAGCTGGTGCAGCAGTTTGAAGCTCTGCCAGGCGATCTGGT
GGGCCCATCCCCAGGTGGAGCCCCCTGTCCCCTACACATTGCCACAGGCCATGGCCTGGC
CTCCCAGGAGATTGCTGATGCCCACGGGCTCCTGTCTGCCGAAGCTGGCCGGGATGACCT
GCTGGGCCTCTTGCACTGCGAGGAATGCCCGCCTTCCCAGACTGGTCCTGAAGAGCCTCT
AGAGCCTGCCCCCCGACTGTTGCAGCCCCCTGAGGACCCAGATGAGGATTCTGACTCCCC
AGAATGGGTGGAGGGGGCCTCTGCTGAGCAGGAGGGCAGCAGGAGCTCAAGCAGTTCCCC
GGAACCCTGGCTGGAGACGGTGCCTCTAGTCACACCTGAAGAGCCACCCGCTGGTGCCCA
GAGCCCCGAGACCCTGGCTTCCTACCCTGCCCCCCAGGAGGTGCCTGGTCCCTGTGACCA
TGAAGACCTCCTGGACGGTGTCATATTTGGGGCCAGGTACCTGGGGTCCACCCAGCTGGT
GTCGGAACGGAACCCGCCCACCAGCACGCGCATGGCCCAGGCCCGGGAGGCCATGGACCG
CGTCAAGGCCCCCGATGGGGAGACCCAGCCCATGACGGAGGTGGACCTGTTCGTCTCCAC
CAAGAGGATCAAGGTCTTGACAGCGGACTCCCAGGAGGCCATGATGGACCACGCCCTGCA
TACCATCTCCTACACAGCCGACATCGGCTGCGTGCTGGTGCTGATGGCGCGGCGGCGGCT
GGCACGGAGGCCGGCACCCCAGGACCACGGCCGCCGCCTCTACAAGATGCTCTGCCACGT
ATTCTACGCGGAGGACGCCCAGCTCATCGCCCAGGCCATTGGCCAGGCCTTCGCCGCCGC
CTACAGCCAGTTCCTACGGGAAAGCGGTATTGACCCCAGCCAGGTGGGCGTGCACCCGAG
CCCAGGCGCCTGCCACCTCCATAATGGGGACCTGGACCACTTCTCCAACAGTGACAACTG
CCGGGAGGTGCACCTCGAGAAGCGGCGAGGGGAGGGCCTGGGCGTGGCCCTGGTGGAGTC
GGGCTGGGGCTCCCTGCTGCCCACAGCCGTCATCGCCAACCTGCTGCACGGGGGGCCTGC
TGAGCGCTCGGGGGCCCTCAGCATCGGGGACCGCCTGACCGCCATCAACGGGACCAGCCT
GGTGGGGCTGCCCCTGGCTGCGTGCCAGGCCGCTGTCCGCGAGACGAAGTCGCAGACGTC
GGTGACACTCAGCATCGTCCACTGCCCTCCCGTCACCACCGCCATCATCCACCGGCCCCA
CGCCCGCGAGCAGCTGGGCTTCTGCGTGGAGGACGGCATCATCTGCAGCCTCCTCCGTGG
TGGCATCGCCGAGCGTGGGGGCATCCGCGTCGGCCACCGCATCATTGAGATCAATGGGCA
GAGTGTGGTGGCCACGCCACACGCCCGCATCATCGAGCTGCTCACCGAGGCCTATGGCGA
GGTGCATATCAAGACGATGCCAGCTGCCACATATCGCCTCCTTACAGGCCAGGAGCAGCC
CGTGTACCTGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTG
CAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTG
CCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATA
AGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATT
TGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTT
AACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTT
TTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCG
CTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGT
TTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGA
AATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
ATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATT
CAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCT
CACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGT
TACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGT
TTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGAC
GCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTAC
TCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCT
GCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCG
AAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGG
GAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCA
ATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAA
CAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTT
CCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATC
ATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGG
AGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATT
AAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAA
AGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAA
AAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGC
TCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGA
CAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTC
CGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTT
CTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCT
GTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTG
AGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTA
GCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCT
ACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAA
GAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTT
GCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTA
CGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTAT
CAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGAT
GGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGG
TAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGC
GATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGC
GCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCT
GCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGG
ATCGAGATCT