RRP9 ORF clone pFN21AE5608

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Halotag ORF Clone pFN21AE5608

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Clone info.

Species

human

Clone Name

pFN21AE5608 Sequence (with vector) Restriction Map

Product ID

FHC09754

ORF Sequence

DNA sequence (1425 bp)
Protein sequence (475 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5608

Symbol

RRP9

Alias : RNU3IP2, U3-55K

Description

ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)

Original Clone ID

oc95608

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1425 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 475 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS2837.1 1.7e-118 100.0 RRP9 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020472 256 270 PR00320 G-protein beta WD-40 repeat IPR020472 298 312 PR00320 G-protein beta WD-40 repeat IPR020472 338 352 PR00320 G-protein beta WD-40 repeat HMMPfam IPR019781 139 174 PF00400 WD40 repeat IPR019781 196 227 PF00400 WD40 repeat IPR019781 232 269 PF00400 WD40 repeat IPR019781 276 311 PF00400 WD40 repeat IPR019781 317 350 PF00400 WD40 repeat IPR019781 378 403 PF00400 WD40 repeat HMMSmart IPR001680 135 174 SM00320 WD40 repeat IPR001680 177 227 SM00320 WD40 repeat IPR001680 230 269 SM00320 WD40 repeat IPR001680 272 311 SM00320 WD40 repeat IPR001680 313 351 SM00320 WD40 repeat IPR001680 354 404 SM00320 WD40 repeat ProfileScan IPR019782 142 183 PS50082 WD40 repeat 2 IPR017986 142 360 PS50294 WD40-repeat-containing domain IPR019782 195 236 PS50082 WD40 repeat 2 IPR019782 237 278 PS50082 WD40 repeat 2 IPR019782 279 320 PS50082 WD40 repeat 2 IPR019782 320 360 PS50082 WD40 repeat 2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5608 Download

>KIEE5608  1425 bp
ATGTCGGCAACAGCGGCTGCTCGTAAGCGGGGAAAGCCGGCCTCTGGGGCCGGGGCTGGC
GCGGGGGCCGGCAAGCGGCGGCGAAAGGCCGACTCTGCGGGGGACAGGGGCAAATCCAAG
GGTGGCGGCAAGATGAATGAGGAGATCTCCAGCGACTCTGAGAGCGAGAGCCTAGCTCCA
AGGAAGCCTGAGGAGGAGGAGGAGGAGGAGCTGGAGGAAACTGCACAGGAAAAGAAGCTG
CGCTTGGCCAAGCTCTACCTAGAGCAGCTCCGTCAGCAAGAGGAGGAGAAGGCTGAGGCC
CGTGCATTTGAGGAGGACCAGGTGGCGGGGCGCCTGAAGGAGGATGTGCTTGAGCAGAGG
GGCAGGCTGCAGAAGTTGGTGGCAAAAGAGATCCAGGCCCCAGCCTCAGCTGACATTCGC
GTTTTACGGGGGCACCAGCTCTCTATCACATGTTTGGTCGTCACCCCCGATGACTCAGCC
ATCTTCTCTGCTGCCAAAGACTGCAGCATCATTAAGTGGAGCGTGGAGAGTGGACGGAAG
CTGCATGTGATTCCTCGAGCCAAGAAGGGTGCCGAGGGAAAGCCCCCTGGCCACAGCAGC
CACGTCCTCTGCATGGCCATCTCCTCCGACGGCAAGTACCTTGCCTCTGGTGACCGCAGC
AAGCTCATTCTCATTTGGGAGGCCCAGAGCTGCCAGCACTTGTACACCTTCACAGGACAC
CGGGATGCAGTGTCGGGTCTGGCATTCCGCAGAGGCACCCACCAGCTCTACAGCACATCC
CACGATCGCTCCGTGAAGGTGTGGAATGTGGCAGAGAACTCCTACGTGGAGACGCTCTTC
GGACACCAGGACGCTGTGGCTGCACTGGATGCCTTGAGCCGGGAGTGCTGTGTGACGGCT
GGGGGCCGGGATGGGACTGTACGTGTGTGGAAGATCCCCGAGGAGTCCCAGCTTGTCTTC
TATGGCCACCAGGGCTCCATCGACTGCATCCACCTAATCAATGAGGAGCACATGGTGTCC
GGCGCGGACGATGGCTCTGTGGCCTTGTGGGGTCTCTCCAAGAAGCGACCACTTGCCCTG
CAGCGTGAAGCTCACGGGCTGCGGGGAGAGCCAGGCCTGGAGCAGCCCTTCTGGATATCG
TCGGTGGCAGCCCTCCTCAACACAGACCTTGTGGCCACAGGCTCCCACAGCTCCTGTGTG
CGGCTTTGGCAGTGTGGGGAAGGCTTCCGGCAGCTTGACCTTCTCTGTGACATCCCCCTG
GTGGGTTTTATCAACAGCCTCAAGTTCTCCAGCTCTGGGGACTTCCTGGTGGCTGGGGTA
GGGCAGGAGCACAGGCTTGGCCGATGGTGGAGAATCAAAGAGGCTCGGAATTCTGTCTGC
ATCATCCCACTCCGCAGGGTCCCTGTACCCCCAGCTGCTGGTTCC

ORF Protein

Cloned ORF protein sequence for pFN21AE5608 Download

>KIEE5608  475 aa
MSATAAARKRGKPASGAGAGAGAGKRRRKADSAGDRGKSKGGGKMNEEISSDSESESLAP
RKPEEEEEEELEETAQEKKLRLAKLYLEQLRQQEEEKAEARAFEEDQVAGRLKEDVLEQR
GRLQKLVAKEIQAPASADIRVLRGHQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRK
LHVIPRAKKGAEGKPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGH
RDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTA
GGRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLAL
QREAHGLRGEPGLEQPFWISSVAALLNTDLVATGSHSSCVRLWQCGEGFRQLDLLCDIPL
VGFINSLKFSSSGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLRRVPVPPAAGS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5608 Download

>pFN21AE5608  6130 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCGGCAACAGCGGCTGCTCGTAAGCGGGGAAA
GCCGGCCTCTGGGGCCGGGGCTGGCGCGGGGGCCGGCAAGCGGCGGCGAAAGGCCGACTC
TGCGGGGGACAGGGGCAAATCCAAGGGTGGCGGCAAGATGAATGAGGAGATCTCCAGCGA
CTCTGAGAGCGAGAGCCTAGCTCCAAGGAAGCCTGAGGAGGAGGAGGAGGAGGAGCTGGA
GGAAACTGCACAGGAAAAGAAGCTGCGCTTGGCCAAGCTCTACCTAGAGCAGCTCCGTCA
GCAAGAGGAGGAGAAGGCTGAGGCCCGTGCATTTGAGGAGGACCAGGTGGCGGGGCGCCT
GAAGGAGGATGTGCTTGAGCAGAGGGGCAGGCTGCAGAAGTTGGTGGCAAAAGAGATCCA
GGCCCCAGCCTCAGCTGACATTCGCGTTTTACGGGGGCACCAGCTCTCTATCACATGTTT
GGTCGTCACCCCCGATGACTCAGCCATCTTCTCTGCTGCCAAAGACTGCAGCATCATTAA
GTGGAGCGTGGAGAGTGGACGGAAGCTGCATGTGATTCCTCGAGCCAAGAAGGGTGCCGA
GGGAAAGCCCCCTGGCCACAGCAGCCACGTCCTCTGCATGGCCATCTCCTCCGACGGCAA
GTACCTTGCCTCTGGTGACCGCAGCAAGCTCATTCTCATTTGGGAGGCCCAGAGCTGCCA
GCACTTGTACACCTTCACAGGACACCGGGATGCAGTGTCGGGTCTGGCATTCCGCAGAGG
CACCCACCAGCTCTACAGCACATCCCACGATCGCTCCGTGAAGGTGTGGAATGTGGCAGA
GAACTCCTACGTGGAGACGCTCTTCGGACACCAGGACGCTGTGGCTGCACTGGATGCCTT
GAGCCGGGAGTGCTGTGTGACGGCTGGGGGCCGGGATGGGACTGTACGTGTGTGGAAGAT
CCCCGAGGAGTCCCAGCTTGTCTTCTATGGCCACCAGGGCTCCATCGACTGCATCCACCT
AATCAATGAGGAGCACATGGTGTCCGGCGCGGACGATGGCTCTGTGGCCTTGTGGGGTCT
CTCCAAGAAGCGACCACTTGCCCTGCAGCGTGAAGCTCACGGGCTGCGGGGAGAGCCAGG
CCTGGAGCAGCCCTTCTGGATATCGTCGGTGGCAGCCCTCCTCAACACAGACCTTGTGGC
CACAGGCTCCCACAGCTCCTGTGTGCGGCTTTGGCAGTGTGGGGAAGGCTTCCGGCAGCT
TGACCTTCTCTGTGACATCCCCCTGGTGGGTTTTATCAACAGCCTCAAGTTCTCCAGCTC
TGGGGACTTCCTGGTGGCTGGGGTAGGGCAGGAGCACAGGCTTGGCCGATGGTGGAGAAT
CAAAGAGGCTCGGAATTCTGTCTGCATCATCCCACTCCGCAGGGTCCCTGTACCCCCAGC
TGCTGGTTCCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTG
CAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTG
CCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATA
AGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATT
TGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTT
AACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTT
TTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCG
CTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGT
TTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGA
AATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
ATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATT
CAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCT
CACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGT
TACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGT
TTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGAC
GCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTAC
TCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCT
GCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCG
AAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGG
GAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCA
ATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAA
CAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTT
CCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATC
ATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGG
AGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATT
AAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAA
AGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAA
AAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGC
TCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGA
CAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTC
CGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTT
CTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCT
GTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTG
AGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTA
GCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCT
ACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAA
GAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTT
GCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTA
CGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTAT
CAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGAT
GGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGG
TAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGC
GATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGC
GCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCT
GCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGG
ATCGAGATCT