SCRT2 ORF clone pFN21AE5059

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE5059

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Clone info.

Species

human

Clone Name

pFN21AE5059 Sequence (with vector) Restriction Map

Product ID

FHC26863

ORF Sequence

DNA sequence (921 bp)
Protein sequence (307 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5059

Symbol

SCRT2

Alias : ZNF898B

Description

scratch family zinc finger 2

Original Clone ID

cp95059

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 921 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 307 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13006.1 1.1e-62 100.0 SCRT2 CCDS6421.1 6.5e-28 58.5 SCRT1 CCDS6146.1 1e-13 39.5 SNAI2 CCDS32505.1 7.4e-13 39.4 SNAI3 CCDS13423.1 4.6e-11 58.3 SNAI1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR007087 155 177 PF00096 Zinc finger IPR007087 212 234 PF00096 Zinc finger IPR007087 241 262 PF00096 Zinc finger HMMSmart IPR015880 155 177 SM00355 Zinc finger IPR015880 186 208 SM00355 Zinc finger IPR015880 212 234 SM00355 Zinc finger IPR015880 240 262 SM00355 Zinc finger IPR015880 268 288 SM00355 Zinc finger ProfileScan IPR007087 155 182 PS50157 Zinc finger IPR007087 186 213 PS50157 Zinc finger IPR007087 212 239 PS50157 Zinc finger IPR007087 240 267 PS50157 Zinc finger IPR007087 268 298 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_112599 348 605858 58.5 98.0 NP_003059 268 172800,602150,608890 39.5 95.8 NP_840101 292 612741 39.4 94.8 NP_003566 671 603397 33.2 85.0 XP_006716214 672 603397 33.2 85.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5059 Download

>KIEE5059  921 bp
ATGCCGCGCTCCTTCCTGGTAAAGAAGATCAAAGGGGACGGCTTCCAGTGCAGCGGGGTG
CCGGCCCCCACCTACCACCCCTTGGAGACAGCCTACGTGCTGCCTGGCGCCCGGGGGCCT
CCCGGGGACAACGGGTACGCCCCGCACCGCCTGCCCCCGAGCAGCTACGATGCGGACCAG
AAGCCGGGCCTGGAGCTGGCCCCGGCCGAGCCCGCGTACCCGCCGGCGGCGCCGGAGGAG
TACAGCGACCCCGAAAGCCCGCAGTCGAGCCTGTCGGCGCGCTACTTCCGAGGGGAGGCG
GCAGTGACCGACAGCTACTCCATGGACGCCTTCTTCATCTCGGACGGGCGCTCGCGGCGG
CGGCGGGGCGGGGGCGGCGGGGACGCGGGGGGCTCGGGAGACGCGGGGGGCGCCGGGGGG
CGCGCGGGGCGCGCGGGGGCGCAGGCGGGCGGCGGGCACCGGCACGCGTGCGCCGAGTGC
GGCAAGACCTACGCCACGTCGTCGAACCTGAGCCGCCACAAGCAGACGCACCGCAGCCTG
GACAGCCAGCTGGCGCGCAAATGCCCGACGTGCGGCAAGGCCTACGTGTCCATGCCCGCG
CTCGCCATGCACCTGCTCACGCACAACCTGCGCCACAAGTGCGGCGTCTGCGGCAAGGCC
TTCTCGCGGCCCTGGCTGCTGCAGGGTCACATGCGCTCGCACACCGGCGAAAAGCCGTTC
GGCTGCGCGCACTGCGGCAAGGCCTTCGCCGACCGCTCCAACCTGCGCGCGCACATGCAG
ACGCACTCGGCCTTCAAGCACTACCGCTGCCGCCAGTGCGACAAGAGCTTCGCGCTCAAG
TCCTACCTCCACAAGCACTGCGAGGCGGCCTGCGCCAAGGCGGCCGAGCCACCCCCGCCG
ACCCCCGCCGGCCCGGCCAGC

ORF Protein

Cloned ORF protein sequence for pFN21AE5059 Download

>KIEE5059  307 aa
MPRSFLVKKIKGDGFQCSGVPAPTYHPLETAYVLPGARGPPGDNGYAPHRLPPSSYDADQ
KPGLELAPAEPAYPPAAPEEYSDPESPQSSLSARYFRGEAAVTDSYSMDAFFISDGRSRR
RRGGGGGDAGGSGDAGGAGGRAGRAGAQAGGGHRHACAECGKTYATSSNLSRHKQTHRSL
DSQLARKCPTCGKAYVSMPALAMHLLTHNLRHKCGVCGKAFSRPWLLQGHMRSHTGEKPF
GCAHCGKAFADRSNLRAHMQTHSAFKHYRCRQCDKSFALKSYLHKHCEAACAKAAEPPPP
TPAGPAS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5059 Download

>pFN21AE5059  5626 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCCGCGCTCCTTCCTGGTAAAGAAGATCAAAGG
GGACGGCTTCCAGTGCAGCGGGGTGCCGGCCCCCACCTACCACCCCTTGGAGACAGCCTA
CGTGCTGCCTGGCGCCCGGGGGCCTCCCGGGGACAACGGGTACGCCCCGCACCGCCTGCC
CCCGAGCAGCTACGATGCGGACCAGAAGCCGGGCCTGGAGCTGGCCCCGGCCGAGCCCGC
GTACCCGCCGGCGGCGCCGGAGGAGTACAGCGACCCCGAAAGCCCGCAGTCGAGCCTGTC
GGCGCGCTACTTCCGAGGGGAGGCGGCAGTGACCGACAGCTACTCCATGGACGCCTTCTT
CATCTCGGACGGGCGCTCGCGGCGGCGGCGGGGCGGGGGCGGCGGGGACGCGGGGGGCTC
GGGAGACGCGGGGGGCGCCGGGGGGCGCGCGGGGCGCGCGGGGGCGCAGGCGGGCGGCGG
GCACCGGCACGCGTGCGCCGAGTGCGGCAAGACCTACGCCACGTCGTCGAACCTGAGCCG
CCACAAGCAGACGCACCGCAGCCTGGACAGCCAGCTGGCGCGCAAATGCCCGACGTGCGG
CAAGGCCTACGTGTCCATGCCCGCGCTCGCCATGCACCTGCTCACGCACAACCTGCGCCA
CAAGTGCGGCGTCTGCGGCAAGGCCTTCTCGCGGCCCTGGCTGCTGCAGGGTCACATGCG
CTCGCACACCGGCGAAAAGCCGTTCGGCTGCGCGCACTGCGGCAAGGCCTTCGCCGACCG
CTCCAACCTGCGCGCGCACATGCAGACGCACTCGGCCTTCAAGCACTACCGCTGCCGCCA
GTGCGACAAGAGCTTCGCGCTCAAGTCCTACCTCCACAAGCACTGCGAGGCGGCCTGCGC
CAAGGCGGCCGAGCCACCCCCGCCGACCCCCGCCGGCCCGGCCAGCGTTTAAACGAATTC
GGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTG
CTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCAT
AACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAA
ACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCT
TTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTT
ATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAA
TGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATA
GCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTA
ATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATG
CTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATT
CCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTA
AAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGC
GGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAA
GTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGC
CGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTT
ACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACT
GCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCAC
AACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATA
CCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTA
TTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCG
GATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGAT
AAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGT
AAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGA
AATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACC
GACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAG
AATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACC
GTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACA
AAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGT
TTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACC
TGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATC
TCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGC
CCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACT
TATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTG
CTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTA
TCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCA
AACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAA
AAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACG
AAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCC
TTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAAC
CATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTT
GCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGT
TTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGT
ACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAAC
CGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT