MEX3A ORF clone pFN21AE4127

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE4127

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Clone info.

Species

human

Clone Name

pFN21AE4127 Sequence (with vector) Restriction Map

Product ID

FHC16525

ORF Sequence

DNA sequence (1560 bp)
Protein sequence (520 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE4127

Symbol

MEX3A

Alias : MEX-3A, RKHD4, RNF162

Description

mex-3 RNA binding family member A

Original Clone ID

cp94127

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1560 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 520 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS53377.1 5.5e-88 100.0 MEX3A CCDS11951.2 1.7e-22 46.3 MEX3C CCDS32865.2 9.8e-22 46.0 MEX3D CCDS10319.1 3e-21 45.8 MEX3B The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018111 134 193 PF00013 K Homology IPR018111 225 284 PF00013 K Homology HMMSmart IPR004087 130 198 SM00322 K Homology IPR004087 222 289 SM00322 K Homology IPR001841 469 508 SM00184 Zinc finger ProfileScan IPR004088 141 193 PS50084 K Homology IPR004088 223 284 PS50084 K Homology IPR001841 469 509 PS50089 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001087194 520 611007 100.0 100.0 NP_057710 659 611005 46.3 93.5 XP_016855266 598 611009 46.0 80.6 NP_976049 651 611009 46.0 80.6 NP_001167589 666 611009 46.0 80.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE4127 Download

>KIEE4127  1560 bp
ATGCCTAGTCTAGTGGTATCTGGAATAATGGAAAGAAATGGGGGCTTTGGAGAACTAGGA
TGTTTCGGGGGAAGCGCTAAGGACCGAGGGCTGCTGGAAGACGAGCGCGCCCTTCAGCTG
GCTCTCGATCAACTCTGCCTCCTGGGTTTGGGGGAGCCCCCCGCCCCCACGGCGGGCGAG
GACGGGGGAGGTGGGGGGGGCGGCGCCCCCGCGCAGCCGGCCGCCCCCCCGCAGCCGGCC
CCGCCGCCGCCGCCCGCGGCGCCCCCGGCCGCCCCGACGGCGGCCCCCGCAGCGCAGACG
CCCCAGCCCCCCACCGCCCCCAAAGGGGCGAGCGACGCCAAGCTCTGCGCTCTCTACAAA
GAGGCCGAGCTGCGCCTGAAGGGCAGCAGCAACACCACGGAGTGTGTTCCCGTGCCCACC
TCCGAGCACGTGGCCGAGATCGTGGGCAGGCAAGGCTGCAAGATTAAGGCCTTGAGGGCC
AAGACCAACACCTACATCAAGACACCGGTGAGGGGCGAGGAACCAGTGTTCATGGTGACA
GGGCGACGGGAGGACGTGGCCACAGCCCGGCGGGAAATCATCTCAGCAGCGGAGCACTTC
TCCATGATCCGTGCCTCCCGCAACAAGTCAGGCGCCGCCTTTGGTGTGGCTCCTGCTCTG
CCCGGCCAGGTGACCATCCGTGTGCGGGTGCCCTACCGCGTGGTGGGGCTGGTGGTGGGC
CCCAAAGGGGCAACCATCAAGCGCATCCAGCAGCAAACCAACACATACATTATCACACCA
AGCCGTGACCGCGACCCCGTGTTCGAGATCACGGGTGCCCCAGGCAACGTGGAGCGTGCG
CGCGAGGAGATCGAGACGCACATCGCGGTGCGCACTGGCAAGATCCTCGAGTACAACAAT
GAAAACGACTTCCTGGCGGGGAGCCCCGACGCAGCAATCGATAGCCGCTACTCCGACGCC
TGGCGGGTGCACCAGCCCGGCTGCAAGCCCCTCTCCACCTTCCGGCAGAACAGCCTGGGC
TGCATCGGCGAGTGCGGAGTGGACTCTGGCTTTGAGGCCCCACGCCTGGGTGAGCAGGGC
GGGGACTTTGGCTACGGCGGGTACCTCTTTCCGGGCTATGGCGTGGGCAAGCAGGATGTG
TACTACGGCGTGGCCGAGACTAGCCCCCCGCTGTGGGCGGGCCAGGAGAACGCCACGCCC
ACCTCCGTGCTCTTCTCCTCTGCCTCCTCCTCCTCCTCCTCTTCCGCCAAGGCCCGCGCT
GGGCCCCCGGGCGCACACCGCTCCCCTGCCACTTCCGCGGGACCCGAGCTGGCCGGACTC
CCGAGGCGCCCCCCGGGAGAGCCGCTCCAGGGCTTCTCTAAACTTGGTGGGGGCGGCCTG
CGGAGCCCCGGCGGCGGGCGGGATTGCATGGTCTGCTTTGAGAGCGAAGTGACTGCCGCC
CTTGTGCCCTGCGGACACAACCTGTTCTGCATGGAGTGTGCAGTACGCATCTGCGAGAGG
ACGGACCCAGAGTGTCCCGTCTGCCACATCACAGCCACGCAAGCCATCCGAATATTCTCC

ORF Protein

Cloned ORF protein sequence for pFN21AE4127 Download

>KIEE4127  520 aa
MPSLVVSGIMERNGGFGELGCFGGSAKDRGLLEDERALQLALDQLCLLGLGEPPAPTAGE
DGGGGGGGAPAQPAAPPQPAPPPPPAAPPAAPTAAPAAQTPQPPTAPKGASDAKLCALYK
EAELRLKGSSNTTECVPVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFMVT
GRREDVATARREIISAAEHFSMIRASRNKSGAAFGVAPALPGQVTIRVRVPYRVVGLVVG
PKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEIETHIAVRTGKILEYNN
ENDFLAGSPDAAIDSRYSDAWRVHQPGCKPLSTFRQNSLGCIGECGVDSGFEAPRLGEQG
GDFGYGGYLFPGYGVGKQDVYYGVAETSPPLWAGQENATPTSVLFSSASSSSSSSAKARA
GPPGAHRSPATSAGPELAGLPRRPPGEPLQGFSKLGGGGLRSPGGGRDCMVCFESEVTAA
LVPCGHNLFCMECAVRICERTDPECPVCHITATQAIRIFS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE4127 Download

>pFN21AE4127  6265 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCCTAGTCTAGTGGTATCTGGAATAATGGAAAG
AAATGGGGGCTTTGGAGAACTAGGATGTTTCGGGGGAAGCGCTAAGGACCGAGGGCTGCT
GGAAGACGAGCGCGCCCTTCAGCTGGCTCTCGATCAACTCTGCCTCCTGGGTTTGGGGGA
GCCCCCCGCCCCCACGGCGGGCGAGGACGGGGGAGGTGGGGGGGGCGGCGCCCCCGCGCA
GCCGGCCGCCCCCCCGCAGCCGGCCCCGCCGCCGCCGCCCGCGGCGCCCCCGGCCGCCCC
GACGGCGGCCCCCGCAGCGCAGACGCCCCAGCCCCCCACCGCCCCCAAAGGGGCGAGCGA
CGCCAAGCTCTGCGCTCTCTACAAAGAGGCCGAGCTGCGCCTGAAGGGCAGCAGCAACAC
CACGGAGTGTGTTCCCGTGCCCACCTCCGAGCACGTGGCCGAGATCGTGGGCAGGCAAGG
CTGCAAGATTAAGGCCTTGAGGGCCAAGACCAACACCTACATCAAGACACCGGTGAGGGG
CGAGGAACCAGTGTTCATGGTGACAGGGCGACGGGAGGACGTGGCCACAGCCCGGCGGGA
AATCATCTCAGCAGCGGAGCACTTCTCCATGATCCGTGCCTCCCGCAACAAGTCAGGCGC
CGCCTTTGGTGTGGCTCCTGCTCTGCCCGGCCAGGTGACCATCCGTGTGCGGGTGCCCTA
CCGCGTGGTGGGGCTGGTGGTGGGCCCCAAAGGGGCAACCATCAAGCGCATCCAGCAGCA
AACCAACACATACATTATCACACCAAGCCGTGACCGCGACCCCGTGTTCGAGATCACGGG
TGCCCCAGGCAACGTGGAGCGTGCGCGCGAGGAGATCGAGACGCACATCGCGGTGCGCAC
TGGCAAGATCCTCGAGTACAACAATGAAAACGACTTCCTGGCGGGGAGCCCCGACGCAGC
AATCGATAGCCGCTACTCCGACGCCTGGCGGGTGCACCAGCCCGGCTGCAAGCCCCTCTC
CACCTTCCGGCAGAACAGCCTGGGCTGCATCGGCGAGTGCGGAGTGGACTCTGGCTTTGA
GGCCCCACGCCTGGGTGAGCAGGGCGGGGACTTTGGCTACGGCGGGTACCTCTTTCCGGG
CTATGGCGTGGGCAAGCAGGATGTGTACTACGGCGTGGCCGAGACTAGCCCCCCGCTGTG
GGCGGGCCAGGAGAACGCCACGCCCACCTCCGTGCTCTTCTCCTCTGCCTCCTCCTCCTC
CTCCTCTTCCGCCAAGGCCCGCGCTGGGCCCCCGGGCGCACACCGCTCCCCTGCCACTTC
CGCGGGACCCGAGCTGGCCGGACTCCCGAGGCGCCCCCCGGGAGAGCCGCTCCAGGGCTT
CTCTAAACTTGGTGGGGGCGGCCTGCGGAGCCCCGGCGGCGGGCGGGATTGCATGGTCTG
CTTTGAGAGCGAAGTGACTGCCGCCCTTGTGCCCTGCGGACACAACCTGTTCTGCATGGA
GTGTGCAGTACGCATCTGCGAGAGGACGGACCCAGAGTGTCCCGTCTGCCACATCACAGC
CACGCAAGCCATCCGAATATTCTCCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCC
TCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAG
CTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTT
CGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGA
AAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGC
TGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAG
ATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAA
TGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATC
CGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGT
GGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGG
AAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGC
CTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG
GGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTT
CGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTA
TTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAAT
GACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGA
GAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACA
ACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACT
CGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACC
ACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACT
CTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTT
CTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGT
GGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTT
ATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATA
GGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGG
TATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAA
AGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGG
CGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGA
GGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCG
TGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGG
GAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTC
GCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCG
GTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCA
CTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGT
GGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAG
TTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCG
GTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATC
CTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTT
TGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAG
GAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAG
TGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTA
AAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTC
TGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAA
ATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATG
CGTCCGGCGTAGAGGATCGAGATCT