TRIML1 ORF clone pFN21AE4095

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE4095

How to Order Order Information

Clone info.

Species

human

Clone Name

pFN21AE4095 Sequence (with vector) Restriction Map

Product ID

FHC12613

ORF Sequence

DNA sequence (1404 bp)
Protein sequence (468 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE4095

Symbol

TRIML1

Alias : RNF209

Description

tripartite motif family-like 1

Original Clone ID

cp94095

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1404 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 468 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3851.1 5.6e-111 100.0 TRIML1 CCDS31048.1 2.4e-36 40.3 TRIM11 CCDS44525.1 3.7e-33 39.6 TRIM21 CCDS1636.1 1.7e-29 36.4 TRIM58 CCDS73363.1 2.9e-28 34.7 TRIM64 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR003879 284 301 PR01407 Butyrophylin-like IPR003879 301 318 PR01407 Butyrophylin-like IPR003879 323 347 PR01407 Butyrophylin-like IPR003879 353 366 PR01407 Butyrophylin-like IPR003879 398 422 PR01407 Butyrophylin-like IPR003879 429 447 PR01407 Butyrophylin-like HMMPfam IPR018957 16 56 PF00097 Zinc finger IPR003877 338 447 PF00622 SPla/RYanodine receptor SPRY HMMSmart IPR001841 16 56 SM00184 Zinc finger IPR006574 285 337 SM00589 SPRY-associated IPR018355 338 465 SM00449 SPla/RYanodine receptor subgroup ProfileScan IPR001841 16 56 PS50089 Zinc finger IPR001870 267 468 PS50188 B302/SPRY domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_660215 468 607868 40.3 98.7 XP_016857901 467 607868 40.1 98.7 NP_003132 475 109092 39.6 99.4 XP_011542511 477 606123 32.8 96.8 XP_011542512 477 606123 32.8 96.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE4095 Download

>KIEE4095  1404 bp
ATGTCTACAGCAGATCTGATGGAGAACCTCAGGGAGGAACTCACCTGTTTCATCTGCTTA
GACTATTTCAGCAGCCCAGTGACCACCGAGTGTGGGCACAGCTTTTGTCTGGTGTGTCTC
CTCAGGAGCTGGGAGGAACATAACACACCTTTATCTTGTCCTGAGTGCTGGAGGACCTTG
GAGGGCCCGCATTTCCAGTCAAACGAGCGTCTGGGGAGGCTGGCCAGCATCGCCAGGCAG
CTCCGGTCCCAGGTGCTGCAGAGCGAGGATGAGCAGGGCAGCTACGGGAGGATGCCCACC
ACTGCCAAGGCGCTCTCCGATGACGAGCAGGGTGGAAGCGCCTTCGTAGCCCAGAGCCAT
GGTGCAAACAGAGTGCATCTCTCCAGCGAGGCTGAGGAGCATCACAGAGAGAAACTCCAG
GAAATCCTGAATCTTTTGCGTGTAAGGAGAAAGGAAGCTCAGGCTGTACTAACCCATGAG
AAGGAGAGAGTGAAACTGTGCCAGGAAGAAACAAAGACTTGTAAACAGGTTGTTGTGTCA
GAATACATGAAAATGCACCAGTTCCTGAAGGAAGAGGAGCAGCTTCAACTCCAGCTACTA
GAACAGGAAGAGAAAGAGAACATGAGGAAGCTGAGGAACAATGAGATCAAACTGACCCAG
CAAATCAGAAGCCTAAGCAAAATGATCGCACAGATTGAGTCCTCAAGTCAAAGCTCGGCT
TTCGAATCTCTTGAGGAAGTGAGAGGAGCCCTGGAAAGGAGCGAGCCACTCTTGCTTCAG
TGTCCAGAGGCCACCACCACAGAGCTGAGTCTGTGCCGCATCACGGGAATGAAGGAGATG
CTAAGAAAATTCAGCACGGAGATAACGCTGGACCCAGCCACAGCTAATGCCTATCTCGTG
TTGTCGGAGGATCTGAAGAGTGTGAAATATGGGGGAAGCAGACAGCAGCTACCCGACAAC
CCGGAAAGATTTGACCAGTCTGCGACTGTGCTGGGTACTCAGATCTTCACCAGTGGGAGA
CACTACTGGGAGGTGGAGGTGGGAAACAAGACCGAGTGGGAAGTGGGCATCTGCAAGGAC
TCTGTGAGCAGAAAGGGGAATCTCCCCAAGCCACCTGGGGACCTGTTCTCACTAATAGGT
TTAAAAATCGGAGATGATTACAGCCTCTGGGTCTCGTCACCTTTGAAAGGTCAGCACGTC
AGAGAGCCTGTGTGTAAGGTTGGTGTCTTCCTGGACTATGAATCTGGACATATAGCATTC
TACAACGGGACGGATGAATCCCTCATCTACAGCTTCCCGCAGGCTTCTTTCCAAGAGGCC
CTCAGGCCTATCTTTTCCCCCTGCCTCCCAAATGAGGGGACAAACACAGACCCTCTCACC
ATCTGCTCACTGAACAGCCACGTC

ORF Protein

Cloned ORF protein sequence for pFN21AE4095 Download

>KIEE4095  468 aa
MSTADLMENLREELTCFICLDYFSSPVTTECGHSFCLVCLLRSWEEHNTPLSCPECWRTL
EGPHFQSNERLGRLASIARQLRSQVLQSEDEQGSYGRMPTTAKALSDDEQGGSAFVAQSH
GANRVHLSSEAEEHHREKLQEILNLLRVRRKEAQAVLTHEKERVKLCQEETKTCKQVVVS
EYMKMHQFLKEEEQLQLQLLEQEEKENMRKLRNNEIKLTQQIRSLSKMIAQIESSSQSSA
FESLEEVRGALERSEPLLLQCPEATTTELSLCRITGMKEMLRKFSTEITLDPATANAYLV
LSEDLKSVKYGGSRQQLPDNPERFDQSATVLGTQIFTSGRHYWEVEVGNKTEWEVGICKD
SVSRKGNLPKPPGDLFSLIGLKIGDDYSLWVSSPLKGQHVREPVCKVGVFLDYESGHIAF
YNGTDESLIYSFPQASFQEALRPIFSPCLPNEGTNTDPLTICSLNSHV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE4095 Download

>pFN21AE4095  6109 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCTACAGCAGATCTGATGGAGAACCTCAGGGA
GGAACTCACCTGTTTCATCTGCTTAGACTATTTCAGCAGCCCAGTGACCACCGAGTGTGG
GCACAGCTTTTGTCTGGTGTGTCTCCTCAGGAGCTGGGAGGAACATAACACACCTTTATC
TTGTCCTGAGTGCTGGAGGACCTTGGAGGGCCCGCATTTCCAGTCAAACGAGCGTCTGGG
GAGGCTGGCCAGCATCGCCAGGCAGCTCCGGTCCCAGGTGCTGCAGAGCGAGGATGAGCA
GGGCAGCTACGGGAGGATGCCCACCACTGCCAAGGCGCTCTCCGATGACGAGCAGGGTGG
AAGCGCCTTCGTAGCCCAGAGCCATGGTGCAAACAGAGTGCATCTCTCCAGCGAGGCTGA
GGAGCATCACAGAGAGAAACTCCAGGAAATCCTGAATCTTTTGCGTGTAAGGAGAAAGGA
AGCTCAGGCTGTACTAACCCATGAGAAGGAGAGAGTGAAACTGTGCCAGGAAGAAACAAA
GACTTGTAAACAGGTTGTTGTGTCAGAATACATGAAAATGCACCAGTTCCTGAAGGAAGA
GGAGCAGCTTCAACTCCAGCTACTAGAACAGGAAGAGAAAGAGAACATGAGGAAGCTGAG
GAACAATGAGATCAAACTGACCCAGCAAATCAGAAGCCTAAGCAAAATGATCGCACAGAT
TGAGTCCTCAAGTCAAAGCTCGGCTTTCGAATCTCTTGAGGAAGTGAGAGGAGCCCTGGA
AAGGAGCGAGCCACTCTTGCTTCAGTGTCCAGAGGCCACCACCACAGAGCTGAGTCTGTG
CCGCATCACGGGAATGAAGGAGATGCTAAGAAAATTCAGCACGGAGATAACGCTGGACCC
AGCCACAGCTAATGCCTATCTCGTGTTGTCGGAGGATCTGAAGAGTGTGAAATATGGGGG
AAGCAGACAGCAGCTACCCGACAACCCGGAAAGATTTGACCAGTCTGCGACTGTGCTGGG
TACTCAGATCTTCACCAGTGGGAGACACTACTGGGAGGTGGAGGTGGGAAACAAGACCGA
GTGGGAAGTGGGCATCTGCAAGGACTCTGTGAGCAGAAAGGGGAATCTCCCCAAGCCACC
TGGGGACCTGTTCTCACTAATAGGTTTAAAAATCGGAGATGATTACAGCCTCTGGGTCTC
GTCACCTTTGAAAGGTCAGCACGTCAGAGAGCCTGTGTGTAAGGTTGGTGTCTTCCTGGA
CTATGAATCTGGACATATAGCATTCTACAACGGGACGGATGAATCCCTCATCTACAGCTT
CCCGCAGGCTTCTTTCCAAGAGGCCCTCAGGCCTATCTTTTCCCCCTGCCTCCCAAATGA
GGGGACAAACACAGACCCTCTCACCATCTGCTCACTGAACAGCCACGTCGTTTAAACGAA
TTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGG
CTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAG
CATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGA
CAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATT
GCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCAT
TTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTAC
AAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAG
ATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTAC
GTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAA
ATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTT
ATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAA
GTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAAC
AGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTC
AAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGT
CGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCAT
CTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
ACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTG
CACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCC
ATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAA
CTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAG
GCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCT
GATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGAT
GGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAA
CGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATG
ACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCA
CAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGA
ACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATC
ACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGG
CGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGAT
ACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGT
ATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTC
AGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACG
ACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCG
GTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTG
GTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCG
GCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCA
GAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGA
ACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGA
TCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGA
AACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTG
GTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGT
GGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTG
CGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATA
AACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT