GRTP1 ORF clone pFN21AE4064

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE4064

How to Order Order Information

Clone info.

Species

human

Clone Name

pFN21AE4064 Sequence (with vector) Restriction Map

Product ID

FHC11351

ORF Sequence

DNA sequence (1032 bp)
Protein sequence (344 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE4064

Symbol

GRTP1

Alias : TBC1D6

Description

growth hormone regulated TBC protein 1, transcript variant 2

Original Clone ID

cp94064

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1032 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 344 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS66591.1 6.1e-157 100.0 GRTP1 CCDS9534.2 3.3e-137 97.8 GRTP1 CCDS73606.1 2.7e-82 99.5 GRTP1 CCDS59137.1 1.6e-30 35.2 TBC1D2 CCDS75865.1 2.7e-30 35.2 TBC1D2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000195 72 278 PF00566 Rab-GAP/TBC domain HMMSmart IPR000195 65 281 SM00164 Rab-GAP/TBC domain ProfileScan IPR000195 68 258 PS50086 Rab-GAP/TBC domain
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 222 LGVLWTLLVSRWFICLFVDILPV 244 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001254501 468 609871 35.2 84.6 XP_011517145 468 609871 35.2 84.6 XP_016870388 483 609871 35.2 84.6 NP_001254500 928 609871 35.2 84.6 NP_056342 808 613620 32.1 82.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE4064 Download

>KIEE4064  1032 bp
ATGCAGCCCGCCGAGCGCTCGCGGGTCCCCAGGATCGACCCGTACGGATTCGAGCGGCCT
GAGGACTTCGACGACGCCGCCTACGAGAAGTTTTTCTCCAGCTACCTGGTCACGCTCACC
CGCAGGGCGATCAAATGGTCCCGGCTGCTGCAGGGCGGGGGCGTCCCCAGGAGCCGGACA
GTGAAGCGCTATGTCCGGAAAGGGGTCCCGCTGGAGCACCGTGCCCGCGTCTGGATGGTG
CTGAGTGGGGCCCAGGCGCAGATGGACCAGAATCCCGGCTACTACCACCAGCTTCTCCAG
GGAGAGAGAAACCCCAGGCTGGAGGACGCCATCAGGACAGACCTGAACCGGACCTTCCCC
GACAACGTGAAGTTCCGGAAGACCACGGACCCCTGCTTACAGAGGACCCTGTACAATGTG
CTGCTGGCATATGGGCACCATAACCAGGGAGTGGGCTACTGCCAGGGAATGAATTTTATA
GCAGGATATCTGATTCTTATAACAAATAATGAAGAAGAATCTTTTTGGCTGTTAGATGCT
CTTGTTGGAAGAATACTACCAGATTACTACAGCCCGGCCATGCTGGGCCTGAAGACCGAC
CAGGAGGTCCTCGGGGAGCTGGTGCGGGCGAAGCTGCCGGCTGTGGGGGCCCTGATGGAG
CGTCTCGGTGTGCTGTGGACGCTGCTGGTGTCCCGCTGGTTCATCTGCCTGTTTGTGGAC
ATCTTGCCCGTGGAGACAGTGCTTCGGATCTGGGACTGTTTGTTTAACGAAGGCTCGAAG
ATTATCTTCCGGGTGGCCCTGACCTTAATTAAGCAGCACCAGGAGTTGATTTTGGAAGCC
ACCAGCGTTCCAGACATTTGCGATAAGTTTAAGCAGATAACCAAAGGGAGTTTCGTGATG
GAGTGTCACACGTTTATGCAGGTGTGTGGGGCTGCACGTGGCTCAGTCCCCTCCCAGGGG
GCCCCGCCTCACCTGCAGCCCGGGGGCTGCTCTGACCACCCGGAGGGTGCACAGGACGGG
CACCAGTGGGCA

ORF Protein

Cloned ORF protein sequence for pFN21AE4064 Download

>KIEE4064  344 aa
MQPAERSRVPRIDPYGFERPEDFDDAAYEKFFSSYLVTLTRRAIKWSRLLQGGGVPRSRT
VKRYVRKGVPLEHRARVWMVLSGAQAQMDQNPGYYHQLLQGERNPRLEDAIRTDLNRTFP
DNVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDA
LVGRILPDYYSPAMLGLKTDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVD
ILPVETVLRIWDCLFNEGSKIIFRVALTLIKQHQELILEATSVPDICDKFKQITKGSFVM
ECHTFMQVCGAARGSVPSQGAPPHLQPGGCSDHPEGAQDGHQWA

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE4064 Download

>pFN21AE4064  5737 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCAGCCCGCCGAGCGCTCGCGGGTCCCCAGGAT
CGACCCGTACGGATTCGAGCGGCCTGAGGACTTCGACGACGCCGCCTACGAGAAGTTTTT
CTCCAGCTACCTGGTCACGCTCACCCGCAGGGCGATCAAATGGTCCCGGCTGCTGCAGGG
CGGGGGCGTCCCCAGGAGCCGGACAGTGAAGCGCTATGTCCGGAAAGGGGTCCCGCTGGA
GCACCGTGCCCGCGTCTGGATGGTGCTGAGTGGGGCCCAGGCGCAGATGGACCAGAATCC
CGGCTACTACCACCAGCTTCTCCAGGGAGAGAGAAACCCCAGGCTGGAGGACGCCATCAG
GACAGACCTGAACCGGACCTTCCCCGACAACGTGAAGTTCCGGAAGACCACGGACCCCTG
CTTACAGAGGACCCTGTACAATGTGCTGCTGGCATATGGGCACCATAACCAGGGAGTGGG
CTACTGCCAGGGAATGAATTTTATAGCAGGATATCTGATTCTTATAACAAATAATGAAGA
AGAATCTTTTTGGCTGTTAGATGCTCTTGTTGGAAGAATACTACCAGATTACTACAGCCC
GGCCATGCTGGGCCTGAAGACCGACCAGGAGGTCCTCGGGGAGCTGGTGCGGGCGAAGCT
GCCGGCTGTGGGGGCCCTGATGGAGCGTCTCGGTGTGCTGTGGACGCTGCTGGTGTCCCG
CTGGTTCATCTGCCTGTTTGTGGACATCTTGCCCGTGGAGACAGTGCTTCGGATCTGGGA
CTGTTTGTTTAACGAAGGCTCGAAGATTATCTTCCGGGTGGCCCTGACCTTAATTAAGCA
GCACCAGGAGTTGATTTTGGAAGCCACCAGCGTTCCAGACATTTGCGATAAGTTTAAGCA
GATAACCAAAGGGAGTTTCGTGATGGAGTGTCACACGTTTATGCAGGTGTGTGGGGCTGC
ACGTGGCTCAGTCCCCTCCCAGGGGGCCCCGCCTCACCTGCAGCCCGGGGGCTGCTCTGA
CCACCCGGAGGGTGCACAGGACGGGCACCAGTGGGCAGTTTAAACGAATTCGGGCTCGGT
ACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAG
CCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTG
GGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACT
AGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTA
ACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAG
GTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAA
ATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAG
CTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCT
TAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAA
TATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTT
GCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCT
GAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATC
CTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTA
TGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACAC
TATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGC
ATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAAC
TTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGG
GATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGAC
GAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGC
GAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTT
GCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGA
GCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCC
CGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAG
ATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCG
ACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGG
ATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGG
CCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGAC
GCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTG
GAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCT
TTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGG
TGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCT
GCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCAC
TGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGT
TCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTC
TGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCA
CCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGAT
TTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCAC
GTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGT
CCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAA
TGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTA
TTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCA
TTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAG
GGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACT
CCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT