ZNF396 ORF clone pFN21AE3412

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE3412

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Clone info.

Species

human

Clone Name

pFN21AE3412 Sequence (with vector) Restriction Map

Product ID

FHC26290

ORF Sequence

DNA sequence (999 bp)
Protein sequence (333 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE3412

Symbol

ZNF396

Alias : ZSCAN14

Description

zinc finger protein 396

Original Clone ID

cp93412

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 999 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 333 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11913.1 1.9e-60 100.0 ZNF396 CCDS82247.1 1.1e-54 93.7 ZNF396 CCDS82246.1 3.5e-32 99.5 ZNF396 CCDS11912.1 4.1e-26 56.7 ZNF24 CCDS47393.1 1.5e-20 45.6 ZSCAN23 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003309 47 139 PF02023 Transcription regulator SCAN IPR007087 252 273 PF00096 Zinc finger HMMSmart IPR003309 48 158 SM00431 Transcription regulator SCAN IPR015880 251 273 SM00355 Zinc finger IPR015880 279 301 SM00355 Zinc finger ProfileScan IPR003309 52 134 PS50804 Transcription regulator SCAN IPR007087 251 278 PS50157 Zinc finger IPR007087 279 306 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_665699 333 609600 100.0 100.0 NP_001309219 335 609600 93.7 98.2 XP_006722495 335 609600 93.7 98.2 NP_001309215 335 609600 93.7 98.2 XP_016881176 335 609600 93.7 98.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE3412 Download

>KIEE3412  999 bp
ATGTCTGCAAAATTGGGAAAGTCATCATCACTCCTAACACAAACTTCAGAGGAGTGTAAT
GGGATTCTGACAGAGAAGATGGAAGAGGAAGAGCAGACCTGTGATCCAGACTCTAGCCTC
CACTGGAGCAGCAGCTACAGCCCAGAGACCTTCCGCCAGCAATTCAGGCAGTTTGGCTAC
CAGGATTCACCTGGGCCCCATGAGGCTCTGAGCCGGCTCTGGGAACTTTGTCATCTCTGG
CTGAGGCCGGAAGTGCACACCAAGGAGCAGATCCTGGAGCTGCTGGTGCTGGAGCAGTTC
CTGGCCATCCTCCCAAAAGAGCTTCAGGCCTGGGTGCAGAAGCATCATCCAGAGAATGGA
GAGGAAACTGTGACTATGCTGGAGGATGTGGAGAGAGAGCTTGATGGACCAAAGCAGATC
TTTTTTGGACGAAGGAAGGACATGATTGCAGAGAAGCTAGCACCTTCAGAAATCACTGAG
GAATTGCCAAGTAGCCAGCTCATGCCCGTGAAGAAGCAGCTCCAGGGAGCATCATGGGAG
CTTCAGTCCTTAAGACCACATGATGAAGACATCAAAACTACAAATGTGAAATCTGCTTCA
AGGCAAAAGACTTCTTTAGGCATAGAACTGCATTGCAATGTTTCCAATATCCTTCATATG
AATGGCTCCCAGAGTTCCACATATAGAGGAACCTATGAACAAGATGGTAGGTTTGAAAAG
AGACAAGGAAACCCTTCTTGGAAAAAACAACAGAAATGTGATGAATGTGGCAAAATCTTT
AGTCAGAGCTCAGCCCTTATTTTACATCAGAGAATCCACAGTGGAAAGAAACCTTATGCA
TGTGACGAGTGTGCAAAGGCATTCAGCCGAAGCGCAATTCTGATTCAGCATCGACGAACC
CATACTGATTCAAAATATGAACATGCGATTGCAGAGGCCCAAAAGAATATGTACTTCAAG
ACTAGGCTGAAGTGCCCCAGGTCACTTTCAGGAGGCAGA

ORF Protein

Cloned ORF protein sequence for pFN21AE3412 Download

>KIEE3412  333 aa
MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
LQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQDGRFEK
RQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAILIQHRRT
HTDSKYEHAIAEAQKNMYFKTRLKCPRSLSGGR

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE3412 Download

>pFN21AE3412  5704 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCTGCAAAATTGGGAAAGTCATCATCACTCCT
AACACAAACTTCAGAGGAGTGTAATGGGATTCTGACAGAGAAGATGGAAGAGGAAGAGCA
GACCTGTGATCCAGACTCTAGCCTCCACTGGAGCAGCAGCTACAGCCCAGAGACCTTCCG
CCAGCAATTCAGGCAGTTTGGCTACCAGGATTCACCTGGGCCCCATGAGGCTCTGAGCCG
GCTCTGGGAACTTTGTCATCTCTGGCTGAGGCCGGAAGTGCACACCAAGGAGCAGATCCT
GGAGCTGCTGGTGCTGGAGCAGTTCCTGGCCATCCTCCCAAAAGAGCTTCAGGCCTGGGT
GCAGAAGCATCATCCAGAGAATGGAGAGGAAACTGTGACTATGCTGGAGGATGTGGAGAG
AGAGCTTGATGGACCAAAGCAGATCTTTTTTGGACGAAGGAAGGACATGATTGCAGAGAA
GCTAGCACCTTCAGAAATCACTGAGGAATTGCCAAGTAGCCAGCTCATGCCCGTGAAGAA
GCAGCTCCAGGGAGCATCATGGGAGCTTCAGTCCTTAAGACCACATGATGAAGACATCAA
AACTACAAATGTGAAATCTGCTTCAAGGCAAAAGACTTCTTTAGGCATAGAACTGCATTG
CAATGTTTCCAATATCCTTCATATGAATGGCTCCCAGAGTTCCACATATAGAGGAACCTA
TGAACAAGATGGTAGGTTTGAAAAGAGACAAGGAAACCCTTCTTGGAAAAAACAACAGAA
ATGTGATGAATGTGGCAAAATCTTTAGTCAGAGCTCAGCCCTTATTTTACATCAGAGAAT
CCACAGTGGAAAGAAACCTTATGCATGTGACGAGTGTGCAAAGGCATTCAGCCGAAGCGC
AATTCTGATTCAGCATCGACGAACCCATACTGATTCAAAATATGAACATGCGATTGCAGA
GGCCCAAAAGAATATGTACTTCAAGACTAGGCTGAAGTGCCCCAGGTCACTTTCAGGAGG
CAGAGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCA
TGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCG
CTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATAC
ATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAA
ATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAAC
AACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGC
AAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCG
TTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGC
GGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTG
CGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGA
CAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACAT
TTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCA
GAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATC
GAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCA
ATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGG
CAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCA
GTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATA
ACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAG
CTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCG
GAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCA
ACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTA
ATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCT
GGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCA
GCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAG
GCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCAT
TGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGG
TAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCC
AGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCC
CCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGAC
TATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCC
TGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATA
GCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGC
ACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCA
ACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAG
CGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTA
GAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTG
GTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGC
AGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGT
CTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAA
GGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCT
TCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGT
GGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGC
GGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAA
CGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTC
GTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAG
ATCT