Characterization of the cloned ORF
N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand
Length: 1677 bp
Restriction map A
Restriction map B
Genomic Structure
Length: 559 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)![]() |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
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Cloned ORF Nucleotide sequence for pFN21AE3239 Download
>KIEE3239 1677 bp ATGTTTCCCTTTGGGCCCCATAGCCCTGGAGGGGACGGATCGGCCGGAGCCGGGGCTGAG GAGCCGACGCCCCACGAGGGGCAGGCAGCAGCCACCGGGCCGCCCTCGCCACTACATCCC GGGGCTGATGCGACCCATCCCCCTCCACCCGCCCGAAGCCCTCGCCGCCCCGGCGCCCCA TCGCTGTCCCCGGCCCCGCGCTCCGGAGAGCTAGGGCTGCCTGGAGCTCCGGAGTCCTCA ACTGCCTCCGCCCCGGGAGAGCCGTCACCTCCCTCCCCTCCGTGCCGGCGGCCCGGGCCA GACTGCAGGGCCAAGAGCCGGGGCCGACACGGCCTCGGCGCGGGCCTGGGCGGCCCTGGC GCTAGGCTGTTCGGGTGGCTGAAAGAGCGCAGCCTGGGCCGCGGGCTGTTCGTGGACCCG GCGCGGGACAATTTTCGCACCATGACTAGCCTCTACGGTTCCATCCACCCCGCGGACTCG GTGTACCTCAGCACCCGCACCCACGGCGCCGTCTTCAACCTCGAGTACTCGCCCGACGGG TCAGTGCTGACAGTTGCTTGTGAACAAACTGAAGTTCTGCTTTTTGACCCTATATCTTCA AAGCACATAAAAACACTTTCTGAAGCTCATGAAGACTGTGTAAATAATATCAGATTTCTT GATAACCGGCTGTTTGCTACCTGCTCTGATGACACTACAATAGCACTATGGGATCTGAGA AAATTGAACACCAAAGTATGCACTTTACATGGTCACACTAGCTGGGTGAAGAACATCGAA TATGATACTAATACAAGACTCTTAGTAACATCAGGATTTGATGGAAATGTCATTATTTGG GACACTAACAGGTATACAGAAGATGGGTGTCCACATAAGAAATTCTTTCACACACGTTTT CTCATGCGAATGAGGTTAACACCAGATTGTTCCAAAATGTTGATTTCAACGTCCTCTGGA TATCTCTTAATTTTGCATGACCTTGACTTAACTAAGTCTTTAGAAGTAGGCAGCTATCCC ATTTTAAGAGCAAGAAGAACTACTTCAAGTTCAGATTTGACCACTTCATCAAGTTCATCT GGTCCTAGAGTTTCTGGCTCACCTTGTCATCATAGTGATTCTAATTCTTCTGAGAAACAC ATGTCACGAGCCTCTCAAAGAGAAGGAGTTTCACCACGAAATAGTCTTGAAGTCGTAACC CCTGAAGTTCTTGGTGAGAGTGACCACGGAAACTGCATCACGTCCTTACAGCTGCACCCA AAAGGCTGGGCCACTCTTCTTCGGTGCTCAAGCAACAGTGATGATGAGGAGTGTACTTGT GTCTATGAATTCCAAGAAGGAGCTCCAGTGCGACCTGTCTCACCTCGCTGTTCTCTACGA CTGACTCATTACATTGAAGAAGCCAATGTAGGCAGGGGTTACATCAAAGAACTTTGCTTC AGCCCCGATGGACGAATGATTTCTTCCCCACATGGCTATGGGATTCGCTTGTTGGGATTT GACAAACAGTGCAGTGAACTTGTTGACTGCTTGCCCAAAGAAGCCAGTCCCCTGCGGGTG ATCCGTTCTCTGTACTCTCATAATGATGTGGTACTGACAACAAAGTTCTCTCCAACACAT TGTCAGATTGCCTCAGGGTGCCTTAGTGGACGGGTTTCTTTGTATCAGCCAAAGTTT
Cloned ORF protein sequence for pFN21AE3239 Download
>KIEE3239 559 aa MFPFGPHSPGGDGSAGAGAEEPTPHEGQAAATGPPSPLHPGADATHPPPPARSPRRPGAP SLSPAPRSGELGLPGAPESSTASAPGEPSPPSPPCRRPGPDCRAKSRGRHGLGAGLGGPG ARLFGWLKERSLGRGLFVDPARDNFRTMTSLYGSIHPADSVYLSTRTHGAVFNLEYSPDG SVLTVACEQTEVLLFDPISSKHIKTLSEAHEDCVNNIRFLDNRLFATCSDDTTIALWDLR KLNTKVCTLHGHTSWVKNIEYDTNTRLLVTSGFDGNVIIWDTNRYTEDGCPHKKFFHTRF LMRMRLTPDCSKMLISTSSGYLLILHDLDLTKSLEVGSYPILRARRTTSSSDLTTSSSSS GPRVSGSPCHHSDSNSSEKHMSRASQREGVSPRNSLEVVTPEVLGESDHGNCITSLQLHP KGWATLLRCSSNSDDEECTCVYEFQEGAPVRPVSPRCSLRLTHYIEEANVGRGYIKELCF SPDGRMISSPHGYGIRLLGFDKQCSELVDCLPKEASPLRVIRSLYSHNDVVLTTKFSPTH CQIASGCLSGRVSLYQPKF
Nucleotide Sequence (with vector) for pFN21AE3239 Download
>pFN21AE3239 6382 bp TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA CTTTCAGAGCGATAACGCGATCGCCATGTTTCCCTTTGGGCCCCATAGCCCTGGAGGGGA CGGATCGGCCGGAGCCGGGGCTGAGGAGCCGACGCCCCACGAGGGGCAGGCAGCAGCCAC CGGGCCGCCCTCGCCACTACATCCCGGGGCTGATGCGACCCATCCCCCTCCACCCGCCCG AAGCCCTCGCCGCCCCGGCGCCCCATCGCTGTCCCCGGCCCCGCGCTCCGGAGAGCTAGG GCTGCCTGGAGCTCCGGAGTCCTCAACTGCCTCCGCCCCGGGAGAGCCGTCACCTCCCTC CCCTCCGTGCCGGCGGCCCGGGCCAGACTGCAGGGCCAAGAGCCGGGGCCGACACGGCCT CGGCGCGGGCCTGGGCGGCCCTGGCGCTAGGCTGTTCGGGTGGCTGAAAGAGCGCAGCCT GGGCCGCGGGCTGTTCGTGGACCCGGCGCGGGACAATTTTCGCACCATGACTAGCCTCTA CGGTTCCATCCACCCCGCGGACTCGGTGTACCTCAGCACCCGCACCCACGGCGCCGTCTT CAACCTCGAGTACTCGCCCGACGGGTCAGTGCTGACAGTTGCTTGTGAACAAACTGAAGT TCTGCTTTTTGACCCTATATCTTCAAAGCACATAAAAACACTTTCTGAAGCTCATGAAGA CTGTGTAAATAATATCAGATTTCTTGATAACCGGCTGTTTGCTACCTGCTCTGATGACAC TACAATAGCACTATGGGATCTGAGAAAATTGAACACCAAAGTATGCACTTTACATGGTCA CACTAGCTGGGTGAAGAACATCGAATATGATACTAATACAAGACTCTTAGTAACATCAGG ATTTGATGGAAATGTCATTATTTGGGACACTAACAGGTATACAGAAGATGGGTGTCCACA TAAGAAATTCTTTCACACACGTTTTCTCATGCGAATGAGGTTAACACCAGATTGTTCCAA AATGTTGATTTCAACGTCCTCTGGATATCTCTTAATTTTGCATGACCTTGACTTAACTAA GTCTTTAGAAGTAGGCAGCTATCCCATTTTAAGAGCAAGAAGAACTACTTCAAGTTCAGA TTTGACCACTTCATCAAGTTCATCTGGTCCTAGAGTTTCTGGCTCACCTTGTCATCATAG TGATTCTAATTCTTCTGAGAAACACATGTCACGAGCCTCTCAAAGAGAAGGAGTTTCACC ACGAAATAGTCTTGAAGTCGTAACCCCTGAAGTTCTTGGTGAGAGTGACCACGGAAACTG CATCACGTCCTTACAGCTGCACCCAAAAGGCTGGGCCACTCTTCTTCGGTGCTCAAGCAA CAGTGATGATGAGGAGTGTACTTGTGTCTATGAATTCCAAGAAGGAGCTCCAGTGCGACC TGTCTCACCTCGCTGTTCTCTACGACTGACTCATTACATTGAAGAAGCCAATGTAGGCAG GGGTTACATCAAAGAACTTTGCTTCAGCCCCGATGGACGAATGATTTCTTCCCCACATGG CTATGGGATTCGCTTGTTGGGATTTGACAAACAGTGCAGTGAACTTGTTGACTGCTTGCC CAAAGAAGCCAGTCCCCTGCGGGTGATCCGTTCTCTGTACTCTCATAATGATGTGGTACT GACAACAAAGTTCTCTCCAACACATTGTCAGATTGCCTCAGGGTGCCTTAGTGGACGGGT TTCTTTGTATCAGCCAAAGTTTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCT AGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTG AGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGA GCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAA AAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGC AATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATG TGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGG ATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGG GGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGC ACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAAT ATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAG AGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTT CCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGT GCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGC CCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTA TCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGAC TTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAA TTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACT ATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGC CTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACG ATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTA GCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTG CGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGG TCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATC TACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGT GCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTAT CAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGA ACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGT TTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGT GGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGC GCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAA GCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCT CCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTA ACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTG GTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGC CTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTA CCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTG GTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTT TGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGG TCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAA CGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGG ATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAA TTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGC TGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATC CACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGT CCGGCGTAGAGGATCGAGATCT |