FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3239, 559 aa 1>>>pF1KE3239 559 - 559 aa - 559 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.7661+/-0.0011; mu= -0.3016+/- 0.067 mean_var=493.7891+/-100.591, 0's: 0 Z-trim(116.4): 11 B-trim: 0 in 0/54 Lambda= 0.057717 statistics sampled from 17028 (17035) to 17028 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.795), E-opt: 0.2 (0.523), width: 16 Scan time: 4.070 The best scores are: opt bits E(32554) CCDS6613.2 DCAF10 gene_id:79269|Hs108|chr9 ( 559) 3878 337.3 3e-92 CCDS75835.1 DCAF10 gene_id:79269|Hs108|chr9 ( 386) 2575 228.6 1.1e-59 >>CCDS6613.2 DCAF10 gene_id:79269|Hs108|chr9 (559 aa) initn: 3878 init1: 3878 opt: 3878 Z-score: 1769.7 bits: 337.3 E(32554): 3e-92 Smith-Waterman score: 3878; 100.0% identity (100.0% similar) in 559 aa overlap (1-559:1-559) 10 20 30 40 50 60 pF1KE3 MFPFGPHSPGGDGSAGAGAEEPTPHEGQAAATGPPSPLHPGADATHPPPPARSPRRPGAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 MFPFGPHSPGGDGSAGAGAEEPTPHEGQAAATGPPSPLHPGADATHPPPPARSPRRPGAP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 SLSPAPRSGELGLPGAPESSTASAPGEPSPPSPPCRRPGPDCRAKSRGRHGLGAGLGGPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 SLSPAPRSGELGLPGAPESSTASAPGEPSPPSPPCRRPGPDCRAKSRGRHGLGAGLGGPG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ARLFGWLKERSLGRGLFVDPARDNFRTMTSLYGSIHPADSVYLSTRTHGAVFNLEYSPDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 ARLFGWLKERSLGRGLFVDPARDNFRTMTSLYGSIHPADSVYLSTRTHGAVFNLEYSPDG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 SVLTVACEQTEVLLFDPISSKHIKTLSEAHEDCVNNIRFLDNRLFATCSDDTTIALWDLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 SVLTVACEQTEVLLFDPISSKHIKTLSEAHEDCVNNIRFLDNRLFATCSDDTTIALWDLR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 KLNTKVCTLHGHTSWVKNIEYDTNTRLLVTSGFDGNVIIWDTNRYTEDGCPHKKFFHTRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 KLNTKVCTLHGHTSWVKNIEYDTNTRLLVTSGFDGNVIIWDTNRYTEDGCPHKKFFHTRF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 LMRMRLTPDCSKMLISTSSGYLLILHDLDLTKSLEVGSYPILRARRTTSSSDLTTSSSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 LMRMRLTPDCSKMLISTSSGYLLILHDLDLTKSLEVGSYPILRARRTTSSSDLTTSSSSS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 GPRVSGSPCHHSDSNSSEKHMSRASQREGVSPRNSLEVVTPEVLGESDHGNCITSLQLHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 GPRVSGSPCHHSDSNSSEKHMSRASQREGVSPRNSLEVVTPEVLGESDHGNCITSLQLHP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 KGWATLLRCSSNSDDEECTCVYEFQEGAPVRPVSPRCSLRLTHYIEEANVGRGYIKELCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 KGWATLLRCSSNSDDEECTCVYEFQEGAPVRPVSPRCSLRLTHYIEEANVGRGYIKELCF 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 SPDGRMISSPHGYGIRLLGFDKQCSELVDCLPKEASPLRVIRSLYSHNDVVLTTKFSPTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS66 SPDGRMISSPHGYGIRLLGFDKQCSELVDCLPKEASPLRVIRSLYSHNDVVLTTKFSPTH 490 500 510 520 530 540 550 pF1KE3 CQIASGCLSGRVSLYQPKF ::::::::::::::::::: CCDS66 CQIASGCLSGRVSLYQPKF 550 >>CCDS75835.1 DCAF10 gene_id:79269|Hs108|chr9 (386 aa) initn: 2575 init1: 2575 opt: 2575 Z-score: 1185.1 bits: 228.6 E(32554): 1.1e-59 Smith-Waterman score: 2575; 100.0% identity (100.0% similar) in 379 aa overlap (181-559:8-386) 160 170 180 190 200 210 pF1KE3 LYGSIHPADSVYLSTRTHGAVFNLEYSPDGSVLTVACEQTEVLLFDPISSKHIKTLSEAH :::::::::::::::::::::::::::::: CCDS75 MLSRSHRSVLTVACEQTEVLLFDPISSKHIKTLSEAH 10 20 30 220 230 240 250 260 270 pF1KE3 EDCVNNIRFLDNRLFATCSDDTTIALWDLRKLNTKVCTLHGHTSWVKNIEYDTNTRLLVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 EDCVNNIRFLDNRLFATCSDDTTIALWDLRKLNTKVCTLHGHTSWVKNIEYDTNTRLLVT 40 50 60 70 80 90 280 290 300 310 320 330 pF1KE3 SGFDGNVIIWDTNRYTEDGCPHKKFFHTRFLMRMRLTPDCSKMLISTSSGYLLILHDLDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SGFDGNVIIWDTNRYTEDGCPHKKFFHTRFLMRMRLTPDCSKMLISTSSGYLLILHDLDL 100 110 120 130 140 150 340 350 360 370 380 390 pF1KE3 TKSLEVGSYPILRARRTTSSSDLTTSSSSSGPRVSGSPCHHSDSNSSEKHMSRASQREGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 TKSLEVGSYPILRARRTTSSSDLTTSSSSSGPRVSGSPCHHSDSNSSEKHMSRASQREGV 160 170 180 190 200 210 400 410 420 430 440 450 pF1KE3 SPRNSLEVVTPEVLGESDHGNCITSLQLHPKGWATLLRCSSNSDDEECTCVYEFQEGAPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SPRNSLEVVTPEVLGESDHGNCITSLQLHPKGWATLLRCSSNSDDEECTCVYEFQEGAPV 220 230 240 250 260 270 460 470 480 490 500 510 pF1KE3 RPVSPRCSLRLTHYIEEANVGRGYIKELCFSPDGRMISSPHGYGIRLLGFDKQCSELVDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 RPVSPRCSLRLTHYIEEANVGRGYIKELCFSPDGRMISSPHGYGIRLLGFDKQCSELVDC 280 290 300 310 320 330 520 530 540 550 pF1KE3 LPKEASPLRVIRSLYSHNDVVLTTKFSPTHCQIASGCLSGRVSLYQPKF ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LPKEASPLRVIRSLYSHNDVVLTTKFSPTHCQIASGCLSGRVSLYQPKF 340 350 360 370 380 559 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:56:10 2016 done: Sun Nov 6 05:56:11 2016 Total Scan time: 4.070 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]