TRIM17 ORF clone pFN21AE3208

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE3208

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Clone info.

Species

human

Clone Name

pFN21AE3208 Sequence (with vector) Restriction Map

Product ID

FHC12653

ORF Sequence

DNA sequence (1071 bp)
Protein sequence (357 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE3208

Symbol

TRIM17

Alias : RBCC, RNF16, terf

Description

tripartite motif containing 17

Original Clone ID

cp93208

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1071 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 357 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS44327.1 2.9e-77 91.6 TRIM17 CCDS1571.1 4.4e-77 100.0 TRIM17 CCDS31048.1 3.4e-31 48.1 TRIM11 CCDS5678.1 2.9e-25 41.7 TRIM4 CCDS4654.1 1.8e-22 36.1 TRIM27 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018957 16 65 PF00097 Zinc finger IPR000315 95 134 PF00643 Zinc finger HMMSmart IPR001841 16 65 SM00184 Zinc finger IPR000315 94 135 SM00336 Zinc finger ProfileScan IPR001841 16 66 PS50089 Zinc finger IPR000315 94 135 PS50119 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001128327 343 606123 91.6 90.2 NP_057186 477 606123 100.0 82.6 XP_011542512 477 606123 100.0 82.6 XP_006711842 477 606123 100.0 82.6 NP_001020111 477 606123 100.0 82.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE3208 Download

>KIEE3208  1071 bp
ATGGAGGCTGTGGAACTCGCCAGAAAACTGCAGGAGGAAGCTACGTGCTCCATCTGTCTG
GATTACTTCACAGACCCTGTGATGACCACCTGTGGCCACAACTTCTGCCGAGCCTGCATC
CAGCTGAGCTGGGAAAAGGCGAGGGGCAAGAAGGGGAGGCGGAAGCGGAAGGGCTCCTTC
CCCTGCCCCGAGTGCAGAGAGATGTCCCCGCAGAGGAACCTGCTGCCCAACCGGCTGCTG
ACCAAGGTGGCCGAGATGGCGCAGCAGCATCCTGGTCTGCAGAAGCAAGACCTGTGCCAG
GAGCACCACGAGCCCCTCAAGCTTTTCTGCCAGAAGGACCAGAGCCCCATCTGTGTGGTG
TGCAGGGAGTCCCGGGAGCACCGGCTGCACAGGGTGCTGCCCGCCGAGGAGGCAGTGCAG
GGGTACAAGTTGAAGCTGGAGGAGGACATGGAGTACCTTCGGGAGCAGATCACCAGGACA
GGGAATCTGCAGGCCAGGGAGGAGCAGAGCTTAGCCGAGTGGCAGGGCAAGGTGAAGGAG
CGGAGAGAACGCATTGTGCTGGAGTTTGAGAAGATGAACCTCTACCTGGTGGAAGAAGAG
CAGAGGCTCCTCCAGGCTCTGGAGACGGAAGAAGAGGAGACTGCCAGCAGGCTCCGGGAG
AGCGTGGCCTGCCTGGACCGGCAGGGTCACTCTCTGGAGCTGCTGCTGCTGCAGCTGGAG
GAGCGGAGCACACAGGGGCCCCTCCAGATGCTGCAGGACATGAAGGAACCCCTGAGCAGG
AAGAACAACGTGAGTGTGCAGTGCCCAGAGGTTGCCCCCCCAACCAGACCCAGGACTGTG
TGCAGAGTTCCCGGACAGATTGAAGTGCTAAGAGGCTTTCTAGAGAGGATGTGGTGCCTG
ATGCCACCTCCGCGTACCCCTACCTCCTCCTGTATGAGAGCCGCCAGAGGCGCTACCTCG
GCTCTTCGCCGGAGGGCAGTGGGTTCTGCAGCAAGGACCGATTTGTGGCTTACCCCTGTG
CTGTGGGCCAGACGGCCTTCTCCTCTGGGAGGCACTACTGGGAGGTGGGCA

ORF Protein

Cloned ORF protein sequence for pFN21AE3208 Download

>KIEE3208  357 aa
MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF
PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV
CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE
RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE
ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLERMWCL
MPPPRTPTSSCMRAARGATSALRRRAVGSAARTDLWLTPVLWARRPSPLGGTTGRWA

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE3208 Download

>pFN21AE3208  5776 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAGGCTGTGGAACTCGCCAGAAAACTGCAGGA
GGAAGCTACGTGCTCCATCTGTCTGGATTACTTCACAGACCCTGTGATGACCACCTGTGG
CCACAACTTCTGCCGAGCCTGCATCCAGCTGAGCTGGGAAAAGGCGAGGGGCAAGAAGGG
GAGGCGGAAGCGGAAGGGCTCCTTCCCCTGCCCCGAGTGCAGAGAGATGTCCCCGCAGAG
GAACCTGCTGCCCAACCGGCTGCTGACCAAGGTGGCCGAGATGGCGCAGCAGCATCCTGG
TCTGCAGAAGCAAGACCTGTGCCAGGAGCACCACGAGCCCCTCAAGCTTTTCTGCCAGAA
GGACCAGAGCCCCATCTGTGTGGTGTGCAGGGAGTCCCGGGAGCACCGGCTGCACAGGGT
GCTGCCCGCCGAGGAGGCAGTGCAGGGGTACAAGTTGAAGCTGGAGGAGGACATGGAGTA
CCTTCGGGAGCAGATCACCAGGACAGGGAATCTGCAGGCCAGGGAGGAGCAGAGCTTAGC
CGAGTGGCAGGGCAAGGTGAAGGAGCGGAGAGAACGCATTGTGCTGGAGTTTGAGAAGAT
GAACCTCTACCTGGTGGAAGAAGAGCAGAGGCTCCTCCAGGCTCTGGAGACGGAAGAAGA
GGAGACTGCCAGCAGGCTCCGGGAGAGCGTGGCCTGCCTGGACCGGCAGGGTCACTCTCT
GGAGCTGCTGCTGCTGCAGCTGGAGGAGCGGAGCACACAGGGGCCCCTCCAGATGCTGCA
GGACATGAAGGAACCCCTGAGCAGGAAGAACAACGTGAGTGTGCAGTGCCCAGAGGTTGC
CCCCCCAACCAGACCCAGGACTGTGTGCAGAGTTCCCGGACAGATTGAAGTGCTAAGAGG
CTTTCTAGAGAGGATGTGGTGCCTGATGCCACCTCCGCGTACCCCTACCTCCTCCTGTAT
GAGAGCCGCCAGAGGCGCTACCTCGGCTCTTCGCCGGAGGGCAGTGGGTTCTGCAGCAAG
GACCGATTTGTGGCTTACCCCTGTGCTGTGGGCCAGACGGCCTTCTCCTCTGGGAGGCAC
TACTGGGAGGTGGGCAGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTC
GACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGG
CTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGAC
ATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGC
TTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAA
CAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAG
GTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTC
TTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAG
CACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTT
CGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATG
AGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTT
TTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGA
GTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAA
GAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGT
ATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTT
GAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGC
AGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGA
GGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGAT
CGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCT
GTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCC
CGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCG
GCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGC
GGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACG
ACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCA
CTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTC
ACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGT
GAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCC
ATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAA
ACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTC
CTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGG
CGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGC
TGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATC
GTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACA
GGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACT
ACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCG
GAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTT
TTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCT
TTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGA
GATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACG
CTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAG
TGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATC
AGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGT
GATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTA
CTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCG
TAGAGGATCGAGATCT