FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3208, 357 aa 1>>>pF1KE3208 357 - 357 aa - 357 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.4303+/-0.000842; mu= 8.4896+/- 0.050 mean_var=182.8484+/-38.427, 0's: 0 Z-trim(114.0): 101 B-trim: 570 in 1/51 Lambda= 0.094848 statistics sampled from 14491 (14600) to 14491 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.448), width: 16 Scan time: 2.060 The best scores are: opt bits E(32554) CCDS44327.1 TRIM17 gene_id:51127|Hs108|chr1 ( 343) 2005 286.2 2.9e-77 CCDS1571.1 TRIM17 gene_id:51127|Hs108|chr1 ( 477) 2003 286.0 4.4e-77 CCDS31048.1 TRIM11 gene_id:81559|Hs108|chr1 ( 468) 889 133.6 3.4e-31 CCDS5678.1 TRIM4 gene_id:89122|Hs108|chr7 ( 474) 745 113.9 2.9e-25 CCDS4654.1 TRIM27 gene_id:5987|Hs108|chr6 ( 513) 678 104.7 1.8e-22 CCDS34378.1 TRIM39 gene_id:56658|Hs108|chr6 ( 488) 663 102.7 7e-22 CCDS78121.1 RPP21 gene_id:202658|Hs108|chr6 ( 503) 663 102.7 7.2e-22 CCDS34377.1 TRIM39 gene_id:56658|Hs108|chr6 ( 518) 653 101.3 1.9e-21 CCDS1636.1 TRIM58 gene_id:25893|Hs108|chr1 ( 486) 631 98.3 1.5e-20 CCDS44525.1 TRIM21 gene_id:6737|Hs108|chr11 ( 475) 590 92.7 7e-19 CCDS31392.1 TRIM5 gene_id:85363|Hs108|chr11 ( 326) 583 91.5 1e-18 CCDS31394.1 TRIM5 gene_id:85363|Hs108|chr11 ( 347) 583 91.6 1.1e-18 CCDS31393.1 TRIM5 gene_id:85363|Hs108|chr11 ( 493) 583 91.7 1.4e-18 CCDS31388.1 TRIM34 gene_id:445372|Hs108|chr11 ( 842) 575 90.9 4.4e-18 CCDS31390.1 TRIM6 gene_id:117854|Hs108|chr11 ( 488) 560 88.6 1.2e-17 CCDS31389.1 TRIM6 gene_id:117854|Hs108|chr11 ( 516) 560 88.6 1.3e-17 CCDS3808.1 TRIM60 gene_id:166655|Hs108|chr4 ( 471) 547 86.8 4.1e-17 CCDS4568.1 TRIM38 gene_id:10475|Hs108|chr6 ( 465) 542 86.1 6.6e-17 CCDS2015.1 TRIM43 gene_id:129868|Hs108|chr2 ( 446) 539 85.7 8.5e-17 CCDS4465.1 TRIM41 gene_id:90933|Hs108|chr5 ( 518) 530 84.5 2.2e-16 CCDS4466.1 TRIM41 gene_id:90933|Hs108|chr5 ( 630) 530 84.6 2.5e-16 CCDS31391.1 TRIM34 gene_id:53840|Hs108|chr11 ( 488) 522 83.4 4.5e-16 CCDS73363.1 TRIM64 gene_id:120146|Hs108|chr11 ( 449) 508 81.4 1.6e-15 CCDS31356.1 TRIM68 gene_id:55128|Hs108|chr11 ( 485) 507 81.3 1.9e-15 CCDS41612.1 TRIM22 gene_id:10346|Hs108|chr11 ( 498) 506 81.2 2.1e-15 CCDS53693.1 TRIM64B gene_id:642446|Hs108|chr11 ( 449) 502 80.6 2.8e-15 CCDS34374.1 TRIM31 gene_id:11074|Hs108|chr6 ( 425) 474 76.7 3.9e-14 CCDS73287.1 TRIM64C gene_id:646754|Hs108|chr11 ( 450) 471 76.4 5.4e-14 CCDS60930.1 TRIM49D1 gene_id:399939|Hs108|chr11 ( 452) 470 76.2 5.9e-14 CCDS4678.1 TRIM26 gene_id:7726|Hs108|chr6 ( 539) 471 76.4 6.1e-14 CCDS3851.1 TRIML1 gene_id:339976|Hs108|chr4 ( 468) 469 76.1 6.7e-14 CCDS4676.1 TRIM10 gene_id:10107|Hs108|chr6 ( 395) 454 74.0 2.5e-13 CCDS34375.1 TRIM10 gene_id:10107|Hs108|chr6 ( 481) 454 74.1 2.8e-13 CCDS8287.1 TRIM49 gene_id:57093|Hs108|chr11 ( 452) 452 73.8 3.3e-13 CCDS53694.1 TRIM49C gene_id:642612|Hs108|chr11 ( 452) 452 73.8 3.3e-13 CCDS55762.1 TRIM49B gene_id:283116|Hs108|chr11 ( 452) 450 73.5 4e-13 CCDS60929.1 TRIM77 gene_id:390231|Hs108|chr11 ( 450) 403 67.1 3.4e-11 >>CCDS44327.1 TRIM17 gene_id:51127|Hs108|chr1 (343 aa) initn: 1997 init1: 1997 opt: 2005 Z-score: 1500.6 bits: 286.2 E(32554): 2.9e-77 Smith-Waterman score: 2009; 91.6% identity (92.8% similar) in 332 aa overlap (1-322:1-331) 10 20 30 40 50 60 pF1KE3 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLERMWC- :::::::::::::::::::::::::::::::::::::::::::::::::::::: . : CCDS44 ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLGK-WAP 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 ---------LMPPPRTPTSSCMRAARGATSALRRRAVGSAARTDLWLTPVLWARRPSPLG : : : .: . :.:::: CCDS44 RARTSDPGSLGDAPLYPLASEATNGGGSTSALPGDGHWLFTVPS 300 310 320 330 340 pF1KE3 GTTGRWA >>CCDS1571.1 TRIM17 gene_id:51127|Hs108|chr1 (477 aa) initn: 2035 init1: 2003 opt: 2003 Z-score: 1497.4 bits: 286.0 E(32554): 4.4e-77 Smith-Waterman score: 2003; 100.0% identity (100.0% similar) in 295 aa overlap (1-295:1-295) 10 20 30 40 50 60 pF1KE3 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLERMWCL ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLEDVVPD 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 MPPPRTPTSSCMRAARGATSALRRRAVGSAARTDLWLTPVLWARRPSPLGGTTGRWA CCDS15 ATSAYPYLLLYESRQRRYLGSSPEGSGFCSKDRFVAYPCAVGQTAFSSGRHYWEVGMNIT 310 320 330 340 350 360 >>CCDS31048.1 TRIM11 gene_id:81559|Hs108|chr1 (468 aa) initn: 760 init1: 425 opt: 889 Z-score: 673.6 bits: 133.6 E(32554): 3.4e-31 Smith-Waterman score: 889; 48.1% identity (70.2% similar) in 295 aa overlap (1-293:1-285) 10 20 30 40 50 60 pF1KE3 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF : : .:. .:::::::.:::::::::::: ::::::: ::. : :. .: . CCDS31 MAAPDLSTNLQEEATCAICLDYFTDPVMTDCGHNFCRECIRRCW----GQP-----EGPY 10 20 30 40 50 70 80 90 100 110 pF1KE3 PCPECREMSPQRNLLPNRLLTKVAEMAQQ-HPGLQ-KQDLCQEHHEPLKLFCQKDQSPIC ::::::.:::::: ::: :.:.::::.. :: : .: :.::: :: . .: CCDS31 ACPECRELSPQRNLRPNRPLAKMAEMARRLHPPSPVPQGVCPAHREPLAAFCGDELRLLC 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 VVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKV ..:..: :: ::: : ..:.. : :::...:.::.:. . .::. ... . :: : CCDS31 AACERSGEHWAHRVRPLQDAAEDLKAKLEKSLEHLRKQMQDALLFQAQADETCVLWQKMV 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 KERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQ . .:. .. :::.. :.::::.::: :: :: :. ::::..: : .:. : :. . CCDS31 ESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHLAELIAE 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 LEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLERMW :: : : .:::.:. : : ..:..: :::.: . :::::::: .:.:: : CCDS31 LEGRCQLPALGLLQDIKDALRRVQDVKLQPPEVVP-MELRTVCRVPGLVETLRRFRGDVT 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 CLMPPPRTPTSSCMRAARGATSALRRRAVGSAARTDLWLTPVLWARRPSPLGGTTGRWA CCDS31 LDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGRHYWEVEVGD 300 310 320 330 340 350 >>CCDS5678.1 TRIM4 gene_id:89122|Hs108|chr7 (474 aa) initn: 724 init1: 452 opt: 745 Z-score: 567.1 bits: 113.9 E(32554): 2.9e-25 Smith-Waterman score: 745; 41.7% identity (67.7% similar) in 288 aa overlap (7-293:3-279) 10 20 30 40 50 60 pF1KE3 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF :. .::: :: :::::: ::: :::::::.:.. .: : : : : CCDS56 MEAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNW--APGG-------GPF 10 20 30 40 70 80 90 100 110 pF1KE3 PCPECREMSPQRNLLPNRLLTKVAEMAQQHP-GLQKQDLCQEHHEPLKLFCQKDQSPICV ::::::. : : :: :....: .:.. : :: .: :::.:::. :: :.:. CCDS56 PCPECRHPSAPAALRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCL 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE3 VCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVK :::::.::. : . : .:: ..:. :: .... : .. .. .:: : .. ..:. :.: CCDS56 VCRESQEHQTHAMAPIDEAFESYREKLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIK 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE3 ERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQL .: :: :: :.. .:::::. .:: :. ::::: ..: :.. :.. ::. :.:.. CCDS56 SQRMRISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKLILEV 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE3 EERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLERMWC :.: :..::. :: :.:.. .:. : .. .:::..: . :.:. : CCDS56 GEKSQAPTLELLQNPKEVLTRSEIQDVNYSLEA--VKVKTVCQIPLMKEMLKRFQVAVNL 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE3 LMPPPRTPTSSCMRAARGATSALRRRAVGSAARTDLWLTPVLWARRPSPLGGTTGRWA CCDS56 AEDTAHPKLVFSQEGRYVKNTASASSWPVFSSAWNYFAGWRNPQKTAFVERFQHLPCVLG 290 300 310 320 330 340 >>CCDS4654.1 TRIM27 gene_id:5987|Hs108|chr6 (513 aa) initn: 700 init1: 431 opt: 678 Z-score: 517.1 bits: 104.7 E(32554): 1.8e-22 Smith-Waterman score: 678; 36.1% identity (63.3% similar) in 313 aa overlap (1-301:1-302) 10 20 30 40 50 60 pF1KE3 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF : . .:. ::.:.:: .::.::..:.: ::::.: ::. : : . . CCDS46 MASGSVAECLQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTA---------ETNV 10 20 30 40 50 70 80 90 100 110 pF1KE3 PCPECREMSPQRNLLPNRLLTKVAEMAQQ-------HPGLQKQDLCQEHHEPLKLFCQKD ::.::: :::.. ::: :..:.....: :: .. .:..:.:::::.:..: CCDS46 SCPQCRETFPQRHMRPNRHLANVTQLVKQLRTERPSGPG-GEMGVCEKHREPLKLYCEED 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 QSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAE : :::::: .::::: : ::: ::::.:.: ........:.. .:. ::. :: CCDS46 QMPICVVCDRSREHRGHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAE 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 WQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLE . .. .::.:: :::.. : :.: ::: :: . . . ... .. . : CCDS46 LLSLTQMEREKIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLS 180 190 200 210 220 230 240 250 260 270 280 pF1KE3 LLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQ-----IE :. ::::.. : ..:::. . ::: . . . : ..:: . . .. .: : CCDS46 SLIAQLEEKQQQPTRELLQDIGDTLSRAERIRIPEPWITPPDLQEKI-HIFAQKCLFLTE 240 250 260 270 280 290 300 310 320 330 340 pF1KE3 VLRGFLERMWCLMPPPRTPTSSCMRAARGATSALRRRAVGSAARTDLWLTPVLWARRPSP :. : :.: : CCDS46 SLKQFTEKMQSDMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPD 290 300 310 320 330 340 >>CCDS34378.1 TRIM39 gene_id:56658|Hs108|chr6 (488 aa) initn: 715 init1: 404 opt: 663 Z-score: 506.3 bits: 102.7 E(32554): 7e-22 Smith-Waterman score: 663; 33.8% identity (61.2% similar) in 358 aa overlap (10-356:23-365) 10 20 30 40 pF1KE3 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKA :: ::.::.::.:. .::. ::::::.::: :: CCDS34 MAETSLLEAGASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 RGKKGRRKRKGSFPCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQ----DLCQEHH .: .:::: ::. : :.: ::: : ...:.:.: ..... .:: .:: CCDS34 -------ER--DFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHH 70 80 90 100 110 110 120 130 140 150 160 pF1KE3 EPLKLFCQKDQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNL : :.::: .:: .:..: :. :: : :.: ..:.: :: ::.. .: :.... . CCDS34 EALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRC 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE3 QAREEQSLAEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVA .. ::.. .: . :. ::..:. :::... : ::.: ::. :: ::.. .::::..: CCDS34 KSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAA 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE3 CLDRQGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRV : . ..: : ..: . :. ..::.:.: : . ..:... . .. CCDS34 HLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKCEKVKTMEVTSVSIELEKNFSNF 240 250 260 270 280 290 290 300 310 320 330 340 pF1KE3 PGQIEVLRGFLERMWC--LMPPPRTPTSSCMRAARGATSALRRRAVGSAARTDLWLTPVL : : .:: .:... . : . . . : ... .. : :: :: CCDS34 PRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSVKFVETRL------RDLPDTPRR 300 310 320 330 340 350 pF1KE3 WARRPSPL---GGTTGR--WA .. : : : :.:: : CCDS34 FTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPETGYWRVRLWN 350 360 370 380 390 400 >>CCDS78121.1 RPP21 gene_id:202658|Hs108|chr6 (503 aa) initn: 737 init1: 404 opt: 663 Z-score: 506.1 bits: 102.7 E(32554): 7.2e-22 Smith-Waterman score: 663; 33.8% identity (61.2% similar) in 358 aa overlap (10-356:23-365) 10 20 30 40 pF1KE3 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKA :: ::.::.::.:. .::. ::::::.::: :: CCDS78 MAETSLLEAGASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 RGKKGRRKRKGSFPCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQ----DLCQEHH .: .:::: ::. : :.: ::: : ...:.:.: ..... .:: .:: CCDS78 -------ER--DFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHH 70 80 90 100 110 110 120 130 140 150 160 pF1KE3 EPLKLFCQKDQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNL : :.::: .:: .:..: :. :: : :.: ..:.: :: ::.. .: :.... . CCDS78 EALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRC 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE3 QAREEQSLAEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVA .. ::.. .: . :. ::..:. :::... : ::.: ::. :: ::.. .::::..: CCDS78 KSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAA 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE3 CLDRQGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRV : . ..: : ..: . :. ..::.:.: : . ..:... . .. CCDS78 HLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKCEKVKTMEVTSVSIELEKNFSNF 240 250 260 270 280 290 290 300 310 320 330 340 pF1KE3 PGQIEVLRGFLERMWC--LMPPPRTPTSSCMRAARGATSALRRRAVGSAARTDLWLTPVL : : .:: .:... . : . . . : ... .. : :: :: CCDS78 PRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSVKFVETRL------RDLPDTPRR 300 310 320 330 340 350 pF1KE3 WARRPSPL---GGTTGR--WA .. : : : :.:: : CCDS78 FTFYPCVLATEGFTSGRHYWEVEAAHCVLAQDPENQALARFYCYTERTIAKRLVLRRDPS 350 360 370 380 390 400 >>CCDS34377.1 TRIM39 gene_id:56658|Hs108|chr6 (518 aa) initn: 702 init1: 391 opt: 653 Z-score: 498.5 bits: 101.3 E(32554): 1.9e-21 Smith-Waterman score: 653; 38.1% identity (67.0% similar) in 270 aa overlap (10-269:23-283) 10 20 30 40 pF1KE3 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKA :: ::.::.::.:. .::. ::::::.::: :: CCDS34 MAETSLLEAGASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 RGKKGRRKRKGSFPCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQ----DLCQEHH . .:::: ::. : :.: ::: : ...:.:.: ..... .:: .:: CCDS34 ---------ERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHH 70 80 90 100 110 110 120 130 140 150 160 pF1KE3 EPLKLFCQKDQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNL : :.::: .:: .:..: :. :: : :.: ..:.: :: ::.. .: :.... . CCDS34 EALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRC 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE3 QAREEQSLAEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVA .. ::.. .: . :. ::..:. :::... : ::.: ::. :: ::.. .::::..: CCDS34 KSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAA 180 190 200 210 220 230 230 240 250 260 270 pF1KE3 CLDRQGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRK------NNVSVQCPEVAPPTRP : . ..: : ..: . :. ..::.:.: : .. ...:. :: CCDS34 HLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKNIPRKFGGSLSTICPRDHKALLG 240 250 260 270 280 290 280 290 300 310 320 330 pF1KE3 RTVCRVPGQIEVLRGFLERMWCLMPPPRTPTSSCMRAARGATSALRRRAVGSAARTDLWL CCDS34 LVKEINRCEKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLV 300 310 320 330 340 350 >>CCDS1636.1 TRIM58 gene_id:25893|Hs108|chr1 (486 aa) initn: 604 init1: 359 opt: 631 Z-score: 482.6 bits: 98.3 E(32554): 1.5e-20 Smith-Waterman score: 631; 34.1% identity (61.7% similar) in 334 aa overlap (9-336:9-332) 10 20 30 40 50 60 pF1KE3 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF .:.:.: : .:::.. .:: . :::.:: ::. ::. : .: : . CCDS16 MAWAPPGERLREDARCPVCLDFLQEPVSVDCGHSFCLRCISEFCEKSDGAQG-----GVY 10 20 30 40 50 70 80 90 100 110 pF1KE3 PCPECREMSPQRNLLPNRLLTKVAEMAQQ-----HPGLQKQDLCQEHHEPLKLFCQKDQS ::.:: .. ::: :. ..: ... :: .. : .: : :. ::..:.. CCDS16 ACPQCRGPFRPSGFRPNRQLAGLVESVRRLGLGAGPGARR---CARHGEDLSRFCEEDEA 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 PICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQ .: :: . ::: ::. : .::. .:..::. .: .:... . . .: .. . :. CCDS16 ALCWVCDAGPEHRTHRTAPLQEAAGSYQVKLQMALELMRKELEDALTQEANVGKKTVIWK 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 GKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELL ::. .:.:. ::::: .:..:::: :. ::.::. : .::::: . : .:...:. : CCDS16 EKVEMQRQRFRLEFEKHRGFLAQEEQRQLRRLEAEERATLQRLRESKSRLVQQSKALKEL 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 LLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLE .:.:: . : .:. .. :::.. :. : : . .:.: .::. :.:: : CCDS16 ADELQERCQRPALGLLEGVRGVLSRSKAVTRLEAE-NIPMELKTACCIPGRRELLRKFQV 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 RMWCLMPPPRTPTSSCMRAARGATSALRRRAV-GSAARTDLWLTPVLWARRPSPLGGTTG . : : :. :.. .. : : .. : : : CCDS16 DVK-LDPATAHPSLLLTADLRSVQDGEPWRDVPNNPERFDTWPCILGLQSFSSGRHYWEV 300 310 320 330 340 350 pF1KE3 RWA CCDS16 LVGEGAEWGLGVCQDTLPRKGETTPSPENGVWALWLLKGNEYMVLASPSVPLLQLESPRC 360 370 380 390 400 410 >>CCDS44525.1 TRIM21 gene_id:6737|Hs108|chr11 (475 aa) initn: 614 init1: 327 opt: 590 Z-score: 452.4 bits: 92.7 E(32554): 7e-19 Smith-Waterman score: 590; 37.6% identity (65.2% similar) in 287 aa overlap (10-291:10-283) 10 20 30 40 50 60 pF1KE3 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF . ::.:: :::: :..:: :::.::. ::. :: : :: CCDS44 MASAARLTMMWEEVTCPICLDPFVEPVSIECGHSFCQECISQV-----GKGG-----GSV 10 20 30 40 50 70 80 90 100 110 pF1KE3 PCPECREMSPQRNLLPNRLLTKVA----EMAQQ-HPGLQKQDLCQEHHEPLKLFCQKDQS :: ::. .:: ::: :.... :..:. . : : . : : : :.:::.:: . CCDS44 -CPVCRQRFLLKNLRPNRQLANMVNNLKEISQEAREGTQGER-CAVHGERLHLFCEKDGK 60 70 80 90 100 120 130 140 150 160 170 pF1KE3 PICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQ .: :: .::.:: : ..: :::.: :. ::. . ::.. . .:... . :.:. CCDS44 ALCWVCAQSRKHRDHAMVPLEEAAQEYQEKLQVALGELRRKQELAEKLEVEIAIKRADWK 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE3 GKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELL :. .. :: :: ... .::::::: :: :: .:.: : :. : : .:...:. : CCDS44 KTVETQKSRIHAEFVQQKNFLVEEEQRQLQELEKDEREQLRILGEKEAKLAQQSQALQEL 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE3 LLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLE . .:..: .. :..::.. : :... ... ... : . :.::.::: ..:: CCDS44 ISELDRRCHSSALELLQEVIIVLERSESWNLKDLDITSP-ELRSVCHVPGLKKMLRTCAV 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE3 RMWCLMPPPRTPTSSCMRAARGATSALRRRAVGSAARTDLWLTPVLWARRPSPLGGTTGR CCDS44 HITLDPDTANPWLILSEDRRQVRLGDTQQSIPGNEERFDSYPMVLGAQHFHSGKHYWEVD 290 300 310 320 330 340 357 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 17:35:30 2016 done: Mon Nov 7 17:35:31 2016 Total Scan time: 2.060 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]