TRAF3IP1 ORF clone pFN21AE2054

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE2054

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Clone info.

Species

human

Clone Name

pFN21AE2054 Sequence (with vector) Restriction Map

Product ID

FHC28793

ORF Sequence

DNA sequence (1875 bp)
Protein sequence (625 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB590948]

Gene

KIEE2054

Symbol

TRAF3IP1

Alias : FAP116, IFT54, MIP-T3, MIPT3, SLSN9

Description

TNF receptor-associated factor 3 interacting protein 1, transcript variant 2

Original Clone ID

cs02954

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1875 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 625 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS46557.1 1.4e-111 100.0 TRAF3IP1 CCDS33415.1 2.5e-61 90.0 TRAF3IP1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018799 49 619 PF10243 Microtubule/TRAF3/DISC1 binding protein
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001132962 625 607380,616629 100.0 100.0 XP_006712477 624 607380,616629 99.8 100.0 XP_011509250 659 607380,616629 94.8 99.7 NP_056465 691 607380,616629 90.0 94.6 XP_011509247 712 607380,616629 86.8 91.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE2054 Download

>KIEE2054  1875 bp
ATGAACGCGGCGGTGGTGAGGCGGACGCAGGAGGCGCTGGGGAAAGTGATTCGGAGGCCG
CCGCTGACAGAGAAGCTGCTGAGCAAGCCCCCGTTCCGCTACCTGCACGACATCATCACG
GAGGTGATTAGAATGACTGGTTTCATGAAGGGCCTCTACACAGACGCCGAGATGAAGTCT
GATAATGTGAAGGATAAAGATGCAAAAATTAGCTTCCTACAAAAGGCCATAGACGTGGTT
GTAATGGTGTCGGGAGAGCCACTGTTGGCCAAACCAGCCCGAATCGTGGCGGGGCATGAG
CCTGAAAGAACAAACGAGCTGCTCCAGATAATTGGAAAATGCTGTCTCAACAAGCTCTCT
AGTGACGATGCGGTGCGGAGGGTTTTAGCTGGAGAGAAGGGAGAAGTGAAAGGCCGGGCC
TCACTGACCTCAAGATCTCAGGAATTGGATAATAAGAATGTGCGAGAAGAAGAGTCCAGA
GTTCACAAAAATACAGAGGATAGAGGAGACGCTGAAATAAAAGAGAGAAGTACAAGCAGA
GATCGAAAACAGAAGGAAGAATTGAAAGAAGACCGCAAGCCAAGAGAAAAGGACAAGGAC
AAGGAGAAGGCCAAGGAGAATGGCGGAAACAGACACAGAGAAGGGGAGAGAGAGAGAGCC
AAAGCCCGGGCCAGGCCAGACAACGAGCGACAGAAAGACAGAGGCAACAGGGAGCGGGAC
AGAGACTCCGAGCGCAAGAAGGAGACAGAGAGAAAGAGTGAGGGGGGGAAAGAGAAGGAG
AGACTGAGAGACAGGGACCGAGAGCGCGACCGGGACAAAGGGAAGGACAGGGACAGACGG
AGAGTGAAAAACGGGGAGCACTCCTGGGACCTGGACAGGGAGAAGAACAGAGAGCATGAC
AAACCTGAGAAAAAGTCAGCAAGCTCAGGGGAGATGTCTAAAAAGTTATCAGATGGAACT
TTTAAAGACTCCAAGGCTGAAACAGAGACTGAGATTTCCACTAGAGCTTCCAAGTCATTG
ACAACAAAAACATCAAAACGGCGATCCAAAAATTCAGTGGAAGGTGACTCCACCAGTGAT
GCAGAAGGAGATGCTGGACCTGCTGGCCAAGATAAGTCTGAGGTGCCAGAGACTCCAGAA
ATTCCTAATGAGCTTTCATCCAACATCAGAAGAATTCCTCGGCCTGGGAGTGCAAGACCA
GCCCCTCCCCGGGTCAAACGGCAAGACAGCATGGAGGCGCTACAAATGGATAGGTCAGGG
AGTGGTAAAACCGTTTCAAATGTGATTACAGAGTCACACAATTCTGACAATGAAGAGGAT
GATCAATTTGTGGTGGAAGCTGCCCCTCAGCTCTCTGAAATGTCAGAAATTGAAATGGTA
ACAGCAGTGGAACTAGAAGAAGAGGAGAAGCATGGTGGACTTGTGAAAAAAATTTTGGAG
ACGAAGAAAGATTATGAGAAATTGCAGCAGTCACCCAAACCTGGGGAGAAGGAGCGATCT
CTCTTTGAGTCGGCATGGAAGAAGGAGAAGGACATCGTTTCCAAGGAGATAGAGAAGCTC
CGCACGTCCATCCAGACCCTGTGCAAGAGCGCACTTCCCCTGGGGAAGATCATGGACTAC
ATCCAGGAAGACGTGGATGCCATGCAGAATGAGCTGCAGATGTGGCACAGCGAGAACAGG
CAGCACGCCGAGGCCCTGCAGCAGGAGCAGAGGATCACAGACTGTGCCGTGGAGCCCTTA
AAGGCTGAGCTCGCGGAGCTGGAGCAGCTGATCAAAGACCAGCAAGACAAGATCTGTGCT
GTGAAGGCCAACATCCTCAAGAATGAAGAAAAAATCCAGAAAATGGTATATAGTATCAAT
TTGACTTCGAGAAGG

ORF Protein

Cloned ORF protein sequence for pFN21AE2054 Download

>KIEE2054  625 aa
MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
KPEKKSASSGEMSKKLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEGDSTSD
AEGDAGPAGQDKSEVPETPEIPNELSSNIRRIPRPGSARPAPPRVKRQDSMEALQMDRSG
SGKTVSNVITESHNSDNEEDDQFVVEAAPQLSEMSEIEMVTAVELEEEEKHGGLVKKILE
TKKDYEKLQQSPKPGEKERSLFESAWKKEKDIVSKEIEKLRTSIQTLCKSALPLGKIMDY
IQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAELAELEQLIKDQQDKICA
VKANILKNEEKIQKMVYSINLTSRR

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE2054 Download

>pFN21AE2054  6580 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAACGCGGCGGTGGTGAGGCGGACGCAGGAGGC
GCTGGGGAAAGTGATTCGGAGGCCGCCGCTGACAGAGAAGCTGCTGAGCAAGCCCCCGTT
CCGCTACCTGCACGACATCATCACGGAGGTGATTAGAATGACTGGTTTCATGAAGGGCCT
CTACACAGACGCCGAGATGAAGTCTGATAATGTGAAGGATAAAGATGCAAAAATTAGCTT
CCTACAAAAGGCCATAGACGTGGTTGTAATGGTGTCGGGAGAGCCACTGTTGGCCAAACC
AGCCCGAATCGTGGCGGGGCATGAGCCTGAAAGAACAAACGAGCTGCTCCAGATAATTGG
AAAATGCTGTCTCAACAAGCTCTCTAGTGACGATGCGGTGCGGAGGGTTTTAGCTGGAGA
GAAGGGAGAAGTGAAAGGCCGGGCCTCACTGACCTCAAGATCTCAGGAATTGGATAATAA
GAATGTGCGAGAAGAAGAGTCCAGAGTTCACAAAAATACAGAGGATAGAGGAGACGCTGA
AATAAAAGAGAGAAGTACAAGCAGAGATCGAAAACAGAAGGAAGAATTGAAAGAAGACCG
CAAGCCAAGAGAAAAGGACAAGGACAAGGAGAAGGCCAAGGAGAATGGCGGAAACAGACA
CAGAGAAGGGGAGAGAGAGAGAGCCAAAGCCCGGGCCAGGCCAGACAACGAGCGACAGAA
AGACAGAGGCAACAGGGAGCGGGACAGAGACTCCGAGCGCAAGAAGGAGACAGAGAGAAA
GAGTGAGGGGGGGAAAGAGAAGGAGAGACTGAGAGACAGGGACCGAGAGCGCGACCGGGA
CAAAGGGAAGGACAGGGACAGACGGAGAGTGAAAAACGGGGAGCACTCCTGGGACCTGGA
CAGGGAGAAGAACAGAGAGCATGACAAACCTGAGAAAAAGTCAGCAAGCTCAGGGGAGAT
GTCTAAAAAGTTATCAGATGGAACTTTTAAAGACTCCAAGGCTGAAACAGAGACTGAGAT
TTCCACTAGAGCTTCCAAGTCATTGACAACAAAAACATCAAAACGGCGATCCAAAAATTC
AGTGGAAGGTGACTCCACCAGTGATGCAGAAGGAGATGCTGGACCTGCTGGCCAAGATAA
GTCTGAGGTGCCAGAGACTCCAGAAATTCCTAATGAGCTTTCATCCAACATCAGAAGAAT
TCCTCGGCCTGGGAGTGCAAGACCAGCCCCTCCCCGGGTCAAACGGCAAGACAGCATGGA
GGCGCTACAAATGGATAGGTCAGGGAGTGGTAAAACCGTTTCAAATGTGATTACAGAGTC
ACACAATTCTGACAATGAAGAGGATGATCAATTTGTGGTGGAAGCTGCCCCTCAGCTCTC
TGAAATGTCAGAAATTGAAATGGTAACAGCAGTGGAACTAGAAGAAGAGGAGAAGCATGG
TGGACTTGTGAAAAAAATTTTGGAGACGAAGAAAGATTATGAGAAATTGCAGCAGTCACC
CAAACCTGGGGAGAAGGAGCGATCTCTCTTTGAGTCGGCATGGAAGAAGGAGAAGGACAT
CGTTTCCAAGGAGATAGAGAAGCTCCGCACGTCCATCCAGACCCTGTGCAAGAGCGCACT
TCCCCTGGGGAAGATCATGGACTACATCCAGGAAGACGTGGATGCCATGCAGAATGAGCT
GCAGATGTGGCACAGCGAGAACAGGCAGCACGCCGAGGCCCTGCAGCAGGAGCAGAGGAT
CACAGACTGTGCCGTGGAGCCCTTAAAGGCTGAGCTCGCGGAGCTGGAGCAGCTGATCAA
AGACCAGCAAGACAAGATCTGTGCTGTGAAGGCCAACATCCTCAAGAATGAAGAAAAAAT
CCAGAAAATGGTATATAGTATCAATTTGACTTCGAGAAGGGTTTAAACGAATTCGGGCTC
GGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACA
AAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCC
TTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACA
ACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTT
GTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTT
CAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGT
AAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAG
TAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTT
TCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAA
TAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTT
TTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGAT
GCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAG
ATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTG
CTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATA
CACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGAT
GGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCC
AACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATG
GGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAAC
GACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACT
GGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAA
GTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCT
GGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCC
TCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGA
CAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAA
GCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAG
GGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAA
AGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATC
GACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCC
CTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCG
CCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTT
CGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACC
GCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGC
CACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAG
AGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCG
CTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAA
CCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAG
GATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACT
CACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAT
AGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAA
AAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAG
GTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTG
CCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATT
AAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGT
ACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT