PHACTR3 ORF clone pFN21AE1983

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE1983

How to Order Order Information

Clone info.

Species

human

Clone Name

pFN21AE1983 Sequence (with vector) Restriction Map

Product ID

FHC27088

ORF Sequence

DNA sequence (1677 bp)
Protein sequence (559 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB590898]

Gene

KIEE1983

Symbol

PHACTR3

Alias : C20orf101, H17739, PPP1R123, SCAPIN1, SCAPININ

Description

phosphatase and actin regulator 3, transcript variant 1

Original Clone ID

cs02883

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1677 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 559 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13480.1 7.6e-116 100.0 PHACTR3 CCDS56202.1 4.8e-108 97.4 PHACTR3 CCDS42895.1 4.2e-107 100.0 PHACTR3 CCDS13481.1 2.5e-61 86.5 PHACTR3 CCDS75401.1 4e-26 45.0 PHACTR1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004018 440 464 PF02755 RPEL repeat IPR004018 478 500 PF02755 RPEL repeat HMMSmart IPR004018 93 118 SM00707 RPEL repeat IPR004018 401 426 SM00707 RPEL repeat IPR004018 439 464 SM00707 RPEL repeat IPR004018 477 502 SM00707 RPEL repeat ProfileScan IPR004018 93 118 PS51073 RPEL repeat IPR004018 401 426 PS51073 RPEL repeat IPR004018 439 464 PS51073 RPEL repeat IPR004018 477 502 PS51073 RPEL repeat
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_542403 559 608725 100.0 100.0 NP_001186434 556 608725 97.4 96.2 NP_899067 518 608725 100.0 92.7 XP_016883116 518 608725 100.0 92.7 XP_011526827 518 608725 100.0 92.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE1983 Download

>KIEE1983  1677 bp
ATGGCCGCGTCGGAGGACGGGAGCGGCTGCCTCGTGTCGCGGGGCCGCTCGCAGAGTGAC
CCCAGCGTCCTCACCGACTCCTCGGCCACCTCCTCCGCGGACGCCGGGGAGAACCCAGAT
GAGATGGACCAAACGCCCCCGGCGCGTCCTGAATATCTGGTCTCAGGGATTCGAACTCCC
CCTGTGAGGAGGAACAGCAAACTGGCCACCCTGGGCAGGATCTTCAAACCCTGGAAATGG
AGGAAAAAGAAAAACGAAAAACTGAAGCAGACAACGTCAGCGCTGGAGAAGAAGATGGCC
GGCAGGCAAGGCCGAGAGGAGCTCATCAAGAAGGGGCTGCTGGAGATGATGGAGCAGGAT
GCTGAAAGCAAAACTTGCAACCCCGATGGAGGACCCCGATCTGTACAGAGTGAACCACCC
ACTCCCAAGTCGGAGACGCTGACTTCAGAAGATGCCCAGCCCGGAAGCCCCTTGGCCACT
GGGACGGACCAGGTCTCCCTGGACAAGCCACTGTCCTCAGCTGCCCACTTGGACGATGCA
GCCAAGATGCCTTCTGCATCCAGTGGTGAAGAAGCAGACGCTGGCAGCCTCCTGCCCACC
ACCAATGAGCTCTCCCAAGCCTTAGCTGGGGCTGACTCCCTGGACAGTCCTCCCAGACCT
CTGGAGAGATCCGTGGGCCAGCTCCCCAGCCCCCCACTGCTGCCCACTCCGCCACCCAAG
GCAAGCTCCAAAACCACAAAAAATGTCACAGGCCAAGCCACACTCTTCCAAGCCTCCAGC
ATGAAGAGTGCCGACCCTTCCCTCCGGGGCCAGCTCTCCACACCCACGGGGTCTCCGCAT
CTCACCACGGTCCACCGGCCTCTTCCCCCAAGCCGCGTCATTGAGGAGCTGCACAGGGCG
CTGGCCACGAAGCACCGCCAGGACAGTTTTCAAGGAAGAGAAAGTAAAGGGTCTCCAAAG
AAGCGGCTGGATGTCCGTCTGTCGAGAACGTCCAGCGTGGAGCGGGGCAAGGAGAGGGAG
GAGGCTTGGAGCTTTGACGGGGCATTGGAGAACAAGCGAACTGCCGCTAAGGAATCTGAG
GAGAACAAGGAGAACCTGATCATAAATTCTGAACTCAAAGACGACTTGCTTTTGTATCAG
GACGAGGAGGCGCTGAACGACTCCATTATTTCTGGAACACTGCCACGGAAATGCAAGAAG
GAGCTCCTGGCCGTGAAGCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAGACCGGAAC
ATTTTCCCCAGAAGGACTGATGAAGAAAGACAGGAGATCCGGCAGCAGATCGAGATGAAG
CTTTCCAAACGGCTGAGCCAAAGACCTGCCGTGGAAGAGCTGGAGAGAAGAAATATCTTG
AAACAAAGGAATGATCAGACAGAGCAGGAAGAAAGAAGAGAAATCAAGCAAAGATTGACA
AGAAAGCTTAATCAGAGACCCACTGTTGATGAATTAAGAGACAGAAAAATTCTGATACGA
TTCAGTGATTACGTGGAAGTAGCAAAAGCGCAGGACTATGACAGGAGGGCAGACAAACCC
TGGACGAGACTGTCAGCAGCAGATAAGGCAGCAATTCGTAAAGAATTAAATGAGTACAAA
AGTAATGAAATGGAGGTACATGCATCAAGCAAGCACTTGACAAGATTCCACAGGCCA

ORF Protein

Cloned ORF protein sequence for pFN21AE1983 Download

>KIEE1983  559 aa
MAASEDGSGCLVSRGRSQSDPSVLTDSSATSSADAGENPDEMDQTPPARPEYLVSGIRTP
PVRRNSKLATLGRIFKPWKWRKKKNEKLKQTTSALEKKMAGRQGREELIKKGLLEMMEQD
AESKTCNPDGGPRSVQSEPPTPKSETLTSEDAQPGSPLATGTDQVSLDKPLSSAAHLDDA
AKMPSASSGEEADAGSLLPTTNELSQALAGADSLDSPPRPLERSVGQLPSPPLLPTPPPK
ASSKTTKNVTGQATLFQASSMKSADPSLRGQLSTPTGSPHLTTVHRPLPPSRVIEELHRA
LATKHRQDSFQGRESKGSPKKRLDVRLSRTSSVERGKEREEAWSFDGALENKRTAAKESE
ENKENLIINSELKDDLLLYQDEEALNDSIISGTLPRKCKKELLAVKLRNRPSKQELEDRN
IFPRRTDEERQEIRQQIEMKLSKRLSQRPAVEELERRNILKQRNDQTEQEERREIKQRLT
RKLNQRPTVDELRDRKILIRFSDYVEVAKAQDYDRRADKPWTRLSAADKAAIRKELNEYK
SNEMEVHASSKHLTRFHRP

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE1983 Download

>pFN21AE1983  6382 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCGCGTCGGAGGACGGGAGCGGCTGCCTCGT
GTCGCGGGGCCGCTCGCAGAGTGACCCCAGCGTCCTCACCGACTCCTCGGCCACCTCCTC
CGCGGACGCCGGGGAGAACCCAGATGAGATGGACCAAACGCCCCCGGCGCGTCCTGAATA
TCTGGTCTCAGGGATTCGAACTCCCCCTGTGAGGAGGAACAGCAAACTGGCCACCCTGGG
CAGGATCTTCAAACCCTGGAAATGGAGGAAAAAGAAAAACGAAAAACTGAAGCAGACAAC
GTCAGCGCTGGAGAAGAAGATGGCCGGCAGGCAAGGCCGAGAGGAGCTCATCAAGAAGGG
GCTGCTGGAGATGATGGAGCAGGATGCTGAAAGCAAAACTTGCAACCCCGATGGAGGACC
CCGATCTGTACAGAGTGAACCACCCACTCCCAAGTCGGAGACGCTGACTTCAGAAGATGC
CCAGCCCGGAAGCCCCTTGGCCACTGGGACGGACCAGGTCTCCCTGGACAAGCCACTGTC
CTCAGCTGCCCACTTGGACGATGCAGCCAAGATGCCTTCTGCATCCAGTGGTGAAGAAGC
AGACGCTGGCAGCCTCCTGCCCACCACCAATGAGCTCTCCCAAGCCTTAGCTGGGGCTGA
CTCCCTGGACAGTCCTCCCAGACCTCTGGAGAGATCCGTGGGCCAGCTCCCCAGCCCCCC
ACTGCTGCCCACTCCGCCACCCAAGGCAAGCTCCAAAACCACAAAAAATGTCACAGGCCA
AGCCACACTCTTCCAAGCCTCCAGCATGAAGAGTGCCGACCCTTCCCTCCGGGGCCAGCT
CTCCACACCCACGGGGTCTCCGCATCTCACCACGGTCCACCGGCCTCTTCCCCCAAGCCG
CGTCATTGAGGAGCTGCACAGGGCGCTGGCCACGAAGCACCGCCAGGACAGTTTTCAAGG
AAGAGAAAGTAAAGGGTCTCCAAAGAAGCGGCTGGATGTCCGTCTGTCGAGAACGTCCAG
CGTGGAGCGGGGCAAGGAGAGGGAGGAGGCTTGGAGCTTTGACGGGGCATTGGAGAACAA
GCGAACTGCCGCTAAGGAATCTGAGGAGAACAAGGAGAACCTGATCATAAATTCTGAACT
CAAAGACGACTTGCTTTTGTATCAGGACGAGGAGGCGCTGAACGACTCCATTATTTCTGG
AACACTGCCACGGAAATGCAAGAAGGAGCTCCTGGCCGTGAAGCTAAGGAACCGGCCAAG
CAAACAGGAACTAGAAGACCGGAACATTTTCCCCAGAAGGACTGATGAAGAAAGACAGGA
GATCCGGCAGCAGATCGAGATGAAGCTTTCCAAACGGCTGAGCCAAAGACCTGCCGTGGA
AGAGCTGGAGAGAAGAAATATCTTGAAACAAAGGAATGATCAGACAGAGCAGGAAGAAAG
AAGAGAAATCAAGCAAAGATTGACAAGAAAGCTTAATCAGAGACCCACTGTTGATGAATT
AAGAGACAGAAAAATTCTGATACGATTCAGTGATTACGTGGAAGTAGCAAAAGCGCAGGA
CTATGACAGGAGGGCAGACAAACCCTGGACGAGACTGTCAGCAGCAGATAAGGCAGCAAT
TCGTAAAGAATTAAATGAGTACAAAAGTAATGAAATGGAGGTACATGCATCAAGCAAGCA
CTTGACAAGATTCCACAGGCCAGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCT
AGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTG
AGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGA
GCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAA
AAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGC
AATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATG
TGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGG
ATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGG
GGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGC
ACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAAT
ATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAG
AGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTT
CCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGT
GCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGC
CCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTA
TCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGAC
TTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAA
TTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACT
ATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGC
CTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACG
ATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTA
GCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTG
CGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGG
TCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATC
TACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGT
GCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTAT
CAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGA
ACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGT
TTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGT
GGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGC
GCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAA
GCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCT
CCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTA
ACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTG
GTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGC
CTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTA
CCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTG
GTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTT
TGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGG
TCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAA
CGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGG
ATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAA
TTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGC
TGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATC
CACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGT
CCGGCGTAGAGGATCGAGATCT