TOM1L1 ORF clone pFN21AE1937

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Halotag ORF Clone pFN21AE1937

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Clone info.

Species

human

Clone Name

pFN21AE1937 Sequence (with vector) Restriction Map

Product ID

FHC26118

ORF Sequence

DNA sequence (1428 bp)
Protein sequence (476 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB590855]

Gene

KIEE1937

Symbol

TOM1L1

Alias : SRCASM

Description

target of myb1 like 1 membrane trafficking protein

Original Clone ID

cs02837

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1428 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 476 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11582.1 7.2e-155 100.0 TOM1L1 CCDS82161.1 2.5e-128 100.0 TOM1L1 CCDS82160.1 1.7e-109 99.7 TOM1L1 CCDS13913.1 1.5e-20 38.7 TOM1 CCDS46696.1 1.5e-20 38.7 TOM1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR002014 12 150 PF00790 VHS IPR004152 199 292 PF03127 GAT HMMSmart IPR018205 15 150 SM00288 VHS subgroup ProfileScan IPR002014 22 154 PS50179 VHS IPR004152 200 288 PS50909 GAT
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_005477 476 604701 100.0 100.0 NP_001308105 399 604701 100.0 83.8 NP_001308104 399 604701 100.0 83.8 NP_001308103 399 604701 100.0 83.8 XP_016879491 399 604701 100.0 83.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE1937 Download

>KIEE1937  1428 bp
ATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAA
AAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGAC
ATAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAGAAAAGGATT
TCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCACTTATTGACATGTGTGTG
CAGAACTGTGGTCCAAGTTTCCAGTCTCTGATTGTGAAGAAGGAATTTGTTAAAGAGAAT
TTAGTTAAGCTACTGAATCCCAGATACAACTTGCCATTAGACATTCAGAATAGAATCTTG
AATTTCATTAAGACTTGGTCACAGGGCTTCCCAGGAGGTGTGGATGTAAGCGAAGTCAAA
GAAGTATACCTCGACCTGGTTAAGAAAGGCGTTCAGTTTCCTCCCTCAGAAGCAGAGGCT
GAAACAGCAAGACAAGAGACTGCTCAAATCTCATCAAATCCTCCAACATCTGTCCCTACT
GCACCAGCTCTTTCTTCTGTAATTGCTCCAAAGAACTCGACTGTTACATTGGTCCCAGAA
CAGATTGGAAAACTGCACAGTGAATTGGATATGGTGAAAATGAATGTGCGAGTGATGTCC
GCCATATTGATGGAGAATACTCCTGGGTCTGAAAACCATGAAGACATAGAGCTTCTGCAG
AAACTCTATAAAACAGGTCGGGAGATGCAGGAGAGGATCATGGACCTGCTTGTGGTGGTG
GAGAACGAAGATGTAACTGTTGAGCTAATTCAGGTGAATGAGGATTTGAATAATGCTATC
CTTGGATATGAGAGGTTTACTAGAAACCAACAAAGGATTTTGGAGCAAAATAAGAACCAG
AAGGAAGCCACCAATACTACCAGTGAGCCTTCTGCCCCATCTCAAGATCTCCTCGACCTA
AGTCCCAGTCCCCGGATGCCTAGGGCCACTCTGGGAGAACTCAACACCATGAATAATCAA
CTTTCAGGCTTAAATTTCAGCCTTCCAAGTTCTGATGTAACAAACAACTTAAAACCCAGT
CTTCATCCACAGATGAACTTGCTAGCCTTGGAGAATACAGAGATACCCCCGTTTGCCCAA
AGGACCAGCCAAAACCTCACCTCAAGCCACGCATATGATAATTTTCTGGAACATTCAAAT
TCAGTGTTTCTACAGCCAGTTAGTCTACAAACCATTGCAGCAGCACCATCAAACCAGAGT
CTGCCACCTTTGCCCAGCAATCATCCAGCGATGACAAAAAGTGATCTCCAGCCACCTAAT
TACTACGAGGTAATGGAGTTTGATCCCTTAGCTCCTGCTGTCACTACAGAAGCTATTTAT
GAAGAAATTGATGCTCACCAGCACAAAGGAGCTCAAAATGATGGTGAC

ORF Protein

Cloned ORF protein sequence for pFN21AE1937 Download

>KIEE1937  476 aa
MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRI
SKNYNHKEIQLTLSLIDMCVQNCGPSFQSLIVKKEFVKENLVKLLNPRYNLPLDIQNRIL
NFIKTWSQGFPGGVDVSEVKEVYLDLVKKGVQFPPSEAEAETARQETAQISSNPPTSVPT
APALSSVIAPKNSTVTLVPEQIGKLHSELDMVKMNVRVMSAILMENTPGSENHEDIELLQ
KLYKTGREMQERIMDLLVVVENEDVTVELIQVNEDLNNAILGYERFTRNQQRILEQNKNQ
KEATNTTSEPSAPSQDLLDLSPSPRMPRATLGELNTMNNQLSGLNFSLPSSDVTNNLKPS
LHPQMNLLALENTEIPPFAQRTSQNLTSSHAYDNFLEHSNSVFLQPVSLQTIAAAPSNQS
LPPLPSNHPAMTKSDLQPPNYYEVMEFDPLAPAVTTEAIYEEIDAHQHKGAQNDGD

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE1937 Download

>pFN21AE1937  6133 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGC
GACCTCCGTGGGCCACCTCATAGAAAAGGCTACATTTGCTGGAGTTCAGACTGAAGATTG
GGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGC
AGTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTAC
CTTGTCACTTATTGACATGTGTGTGCAGAACTGTGGTCCAAGTTTCCAGTCTCTGATTGT
GAAGAAGGAATTTGTTAAAGAGAATTTAGTTAAGCTACTGAATCCCAGATACAACTTGCC
ATTAGACATTCAGAATAGAATCTTGAATTTCATTAAGACTTGGTCACAGGGCTTCCCAGG
AGGTGTGGATGTAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTTCA
GTTTCCTCCCTCAGAAGCAGAGGCTGAAACAGCAAGACAAGAGACTGCTCAAATCTCATC
AAATCCTCCAACATCTGTCCCTACTGCACCAGCTCTTTCTTCTGTAATTGCTCCAAAGAA
CTCGACTGTTACATTGGTCCCAGAACAGATTGGAAAACTGCACAGTGAATTGGATATGGT
GAAAATGAATGTGCGAGTGATGTCCGCCATATTGATGGAGAATACTCCTGGGTCTGAAAA
CCATGAAGACATAGAGCTTCTGCAGAAACTCTATAAAACAGGTCGGGAGATGCAGGAGAG
GATCATGGACCTGCTTGTGGTGGTGGAGAACGAAGATGTAACTGTTGAGCTAATTCAGGT
GAATGAGGATTTGAATAATGCTATCCTTGGATATGAGAGGTTTACTAGAAACCAACAAAG
GATTTTGGAGCAAAATAAGAACCAGAAGGAAGCCACCAATACTACCAGTGAGCCTTCTGC
CCCATCTCAAGATCTCCTCGACCTAAGTCCCAGTCCCCGGATGCCTAGGGCCACTCTGGG
AGAACTCAACACCATGAATAATCAACTTTCAGGCTTAAATTTCAGCCTTCCAAGTTCTGA
TGTAACAAACAACTTAAAACCCAGTCTTCATCCACAGATGAACTTGCTAGCCTTGGAGAA
TACAGAGATACCCCCGTTTGCCCAAAGGACCAGCCAAAACCTCACCTCAAGCCACGCATA
TGATAATTTTCTGGAACATTCAAATTCAGTGTTTCTACAGCCAGTTAGTCTACAAACCAT
TGCAGCAGCACCATCAAACCAGAGTCTGCCACCTTTGCCCAGCAATCATCCAGCGATGAC
AAAAAGTGATCTCCAGCCACCTAATTACTACGAGGTAATGGAGTTTGATCCCTTAGCTCC
TGCTGTCACTACAGAAGCTATTTATGAAGAAATTGATGCTCACCAGCACAAAGGAGCTCA
AAATGATGGTGACGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGAC
CTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTG
CTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATG
ATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTT
ATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAA
GTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTT
TTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTT
GCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCAC
CGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGG
GGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGT
ATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTT
GCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTG
GGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAA
CGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATT
GACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAG
TACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGT
GCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGA
CCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGT
TGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTA
GCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGG
CAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCC
CTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGT
ATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACG
GGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTG
ATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACT
CAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAG
CAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATA
GGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACC
CGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTG
TTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGC
TTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGG
GCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTC
TTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGA
TTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACG
GCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAA
AAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTG
TTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTT
CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGAT
TATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTG
GATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGG
GGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGG
CGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGAT
CGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTG
TCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAG
AGGATCGAGATCT