CDYL ORF clone pFN21AE1167

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Halotag ORF Clone pFN21AE1167

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Clone info.

Species

human

Clone Name

pFN21AE1167 Sequence (with vector) Restriction Map

Product ID

FHC15903

ORF Sequence

DNA sequence (1794 bp)
Protein sequence (598 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE1167

Symbol

CDYL

Alias : CDYL1

Description

chromodomain protein, Y-like

Original Clone ID

cs03040

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

Features of the cloned ORF sequence

Description

Length: 1794 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 598 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4491.2 6.4e-172 99.6 CDYL CCDS47364.1 1.3e-130 99.8 CDYL CCDS35487.1 5.8e-110 64.0 CDY1B CCDS14802.1 5.8e-110 64.0 CDY1 CCDS14789.1 8.2e-110 63.6 CDY2A The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR023780 62 112 PF00385 Chromo domain IPR001753 361 524 PF00378 Crotonase HMMSmart IPR000953 60 114 SM00298 Chromo domain/shadow ProfileScan IPR000953 61 121 PS50013 Chromo domain/shadow
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004815 544 603778 99.6 89.8 NP_733841 540 400016,415000 64.0 90.0 NP_004816 541 400018,415000 63.6 90.0 NP_004671 554 400016,415000 64.0 88.5 XP_011513299 522 603778 95.5 89.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE1167 Download

>KIEE1167  1794 bp
ATGACATTTCAGGCAAGCCACAGGTCAGCCTGGGGAAAAAGCAGGAAGAAAAACTGGCAA
TACGAGGGCCCAACCCAAAAGTTATTCCTGAAGAGAAACAACGTGTCAGCACCAGATGGG
CCTTCAGACCCCAGCATCTCCGTGAGCAGTGAGCAAAGCGGGGCACAGCAGCCTCCCGCT
TTACAGGTTGAAAGGATTGTTGACAAAAGGAAAAATAAAAAAGGGAAGACAGAGTATTTG
GTTCGGTGGAAAGGCTATGACAGCGAGGACGACACTTGGGAGCCGGAACAGCACCTCGTG
AACTGTGAGGAATACATCCACGACTTCAACAGACGCCACACGGAGAAGCAGAAGGAGAGC
ACATTGACCAGAACAAACAGGACCTCTCCCAACAATGCTAGGAAACAAATCTCCAGATCC
ACCAACAGCAACTTTTCTAAGACCTCTCCTAAGGCACTCGTGATTGGGAAAGACCACGAA
TCCAAAAACAGCCAGCTGTTTGCTGCCAGCCAGAAGTTCAGGAAGAACACAGCTCCATCT
CTCTCCAGCCGGAAGAACATGGACCTAGCGAAGTCAGGTATCAAGATCCTCGTGCCTAAA
AGCCCCGTTAAGAGCAGGACCGCAGTGGACGGCTTTCAGAGCGAGAGCCCTGAGAAACTG
GACCCCGTCGAGCAGGGTCAGGAGGACACAGTGGCACCCGAAGTGGCAGCGGAAAAGCCG
GTCGGAGCTTTATTGGGCCCCGGTGCCGAGAGGGCCAGGATGGGGAGCAGGCCCAGGATA
CACCCACTAGTGCCTCAGGTGCCCGGCCCTGTGACTGCAGCCATGGCCACAGGCTTAGCT
GTTAACGGGAAAGGTACATCTCCGTTCATGGATGCATTAACAGCCAATGGGACAACCAAC
ATACAGACATCTGTTACAGGAGTGACTGCCAGCAAAAGGAAATTTATTGACGACAGAAGA
GACCAGCCTTTTGACAAGCGATTGCATTTCAGCGTGAGGCAAACAGAAAGTGCCTACAGA
TACAGAGATATTGTGGTCAGGAAGCAGGATGGCTTCACCCACATCTTGTTATCCACAAAG
TCCTCAGAGAATAACTCACTAAATCCAGAGGTAATGAGAGAAGTCCAGAGTGCTCTGAGC
ACGGCCGCTGCCGATGACAGCAAGCTGGTACTGCTCAGCGCCGTTGGCAGCGTCTTCTGT
TGTGGACTTGACTTTATTTATTTTATACGACGTCTGACAGATGACAGGAAAAGAGAAAGC
ACTAAAATGGCAGAAGCTATCAGAAACTTCGTGAATACTTTCATTCAATTTAAGAAGCCC
ATTATTGTAGCAGTCAATGGCCCAGCCATTGGTCTAGGAGCATCTATATTGCCTCTTTGC
GATGTGGTTTGGGCTAATGAAAAGGCTTGGTTTCAAACACCCTATACCACCTTCGGACAG
AGTCCAGATGGCTGTTCTACCGTTATGTTTCCCAAGATAATGGGAGGAGCATCTGCAAAC
GAGATGCTGCTCAGTGGACGGAAGCTGACAGCGCAGGAGGCGTGTGGCAAGGGCCTGGTC
TCCCAGGTGTTTTGGCCCGGGACGTTCACTCAGGAAGTGATGGTTCGCATTAAGGAGCTT
GCCTCGTGCAATCCAGTTGTGCTTGAGGAATCCAAAGCCCTCGTGCGCTGCAACATGAAG
ATGGAGCTGGAGCAGGCCAACGAGAGGGAGTGTGAGGTGCTGAAGAAAATCTGGGGCTCG
GCCCAGGGGATGGACTCCATGTTAAAGTACTTGCAGAGGAAGATCGATGAGTTC

ORF Protein

Cloned ORF protein sequence for pFN21AE1167 Download

>KIEE1167  598 aa
MTFQASHRSAWGKSRKKNWQYEGPTQKLFLKRNNVSAPDGPSDPSISVSSEQSGAQQPPA
LQVERIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYIHDFNRRHTEKQKES
TLTRTNRTSPNNARKQISRSTNSNFSKTSPKALVIGKDHESKNSQLFAASQKFRKNTAPS
LSSRKNMDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKP
VGALLGPGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTN
IQTSVTGVTASKRKFIDDRRDQPFDKRLHFSVRQTESAYRYRDIVVRKQDGFTHILLSTK
SSENNSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRES
TKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQ
SPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKEL
ASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE1167 Download

>pFN21AE1167  6499 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGACATTTCAGGCAAGCCACAGGTCAGCCTGGGG
AAAAAGCAGGAAGAAAAACTGGCAATACGAGGGCCCAACCCAAAAGTTATTCCTGAAGAG
AAACAACGTGTCAGCACCAGATGGGCCTTCAGACCCCAGCATCTCCGTGAGCAGTGAGCA
AAGCGGGGCACAGCAGCCTCCCGCTTTACAGGTTGAAAGGATTGTTGACAAAAGGAAAAA
TAAAAAAGGGAAGACAGAGTATTTGGTTCGGTGGAAAGGCTATGACAGCGAGGACGACAC
TTGGGAGCCGGAACAGCACCTCGTGAACTGTGAGGAATACATCCACGACTTCAACAGACG
CCACACGGAGAAGCAGAAGGAGAGCACATTGACCAGAACAAACAGGACCTCTCCCAACAA
TGCTAGGAAACAAATCTCCAGATCCACCAACAGCAACTTTTCTAAGACCTCTCCTAAGGC
ACTCGTGATTGGGAAAGACCACGAATCCAAAAACAGCCAGCTGTTTGCTGCCAGCCAGAA
GTTCAGGAAGAACACAGCTCCATCTCTCTCCAGCCGGAAGAACATGGACCTAGCGAAGTC
AGGTATCAAGATCCTCGTGCCTAAAAGCCCCGTTAAGAGCAGGACCGCAGTGGACGGCTT
TCAGAGCGAGAGCCCTGAGAAACTGGACCCCGTCGAGCAGGGTCAGGAGGACACAGTGGC
ACCCGAAGTGGCAGCGGAAAAGCCGGTCGGAGCTTTATTGGGCCCCGGTGCCGAGAGGGC
CAGGATGGGGAGCAGGCCCAGGATACACCCACTAGTGCCTCAGGTGCCCGGCCCTGTGAC
TGCAGCCATGGCCACAGGCTTAGCTGTTAACGGGAAAGGTACATCTCCGTTCATGGATGC
ATTAACAGCCAATGGGACAACCAACATACAGACATCTGTTACAGGAGTGACTGCCAGCAA
AAGGAAATTTATTGACGACAGAAGAGACCAGCCTTTTGACAAGCGATTGCATTTCAGCGT
GAGGCAAACAGAAAGTGCCTACAGATACAGAGATATTGTGGTCAGGAAGCAGGATGGCTT
CACCCACATCTTGTTATCCACAAAGTCCTCAGAGAATAACTCACTAAATCCAGAGGTAAT
GAGAGAAGTCCAGAGTGCTCTGAGCACGGCCGCTGCCGATGACAGCAAGCTGGTACTGCT
CAGCGCCGTTGGCAGCGTCTTCTGTTGTGGACTTGACTTTATTTATTTTATACGACGTCT
GACAGATGACAGGAAAAGAGAAAGCACTAAAATGGCAGAAGCTATCAGAAACTTCGTGAA
TACTTTCATTCAATTTAAGAAGCCCATTATTGTAGCAGTCAATGGCCCAGCCATTGGTCT
AGGAGCATCTATATTGCCTCTTTGCGATGTGGTTTGGGCTAATGAAAAGGCTTGGTTTCA
AACACCCTATACCACCTTCGGACAGAGTCCAGATGGCTGTTCTACCGTTATGTTTCCCAA
GATAATGGGAGGAGCATCTGCAAACGAGATGCTGCTCAGTGGACGGAAGCTGACAGCGCA
GGAGGCGTGTGGCAAGGGCCTGGTCTCCCAGGTGTTTTGGCCCGGGACGTTCACTCAGGA
AGTGATGGTTCGCATTAAGGAGCTTGCCTCGTGCAATCCAGTTGTGCTTGAGGAATCCAA
AGCCCTCGTGCGCTGCAACATGAAGATGGAGCTGGAGCAGGCCAACGAGAGGGAGTGTGA
GGTGCTGAAGAAAATCTGGGGCTCGGCCCAGGGGATGGACTCCATGTTAAAGTACTTGCA
GAGGAAGATCGATGAGTTCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGA
GTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGT
TGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCA
GACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAA
TGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAAT
AAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGG
GAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATC
CTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGT
CAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACT
TTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT
GTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCA
CGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
GAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCC
CGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTG
GTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTA
TGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATC
GGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTT
GATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATG
CCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGC
TCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCT
CGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTAC
ACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCC
TCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAG
CTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACA
TGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTT
TCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGC
GAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCT
CTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCG
TGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCA
AGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACT
ATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTA
ACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTA
ACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCT
TCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTT
TTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGA
TCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCA
TGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGC
ACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATT
AAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTT
ATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGC
CGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCAC
TTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCG
GCGTAGAGGATCGAGATCT