SAMD3 ORF clone pFN21AE0041

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE0041

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Clone info.

Species

human

Clone Name

pFN21AE0041 Sequence (with vector) Restriction Map

Product ID

FHC06723

Flexi Clone PID

FXC06723

ORF Sequence

DNA sequence (1560 bp)
Protein sequence (520 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527209]

Gene

KIEE0041

Symbol

SAMD3

Description

sterile alpha motif domain containing 3, transcript variant 1

Original Clone ID

oc00741

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1560 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 520 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS34539.1 3.3e-214 100.0 SAMD3 CCDS64525.1 3.5e-214 100.0 SAMD3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR021129 3 64 PF00536 Sterile alpha motif HMMSmart IPR001660 1 66 SM00454 Sterile alpha motif domain ProfileScan IPR001660 4 51 PS50105 Sterile alpha motif domain Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0041 Download

>KIEE0041  1560 bp
ATGGAAACCTGGTCAGTTGAGCAGGTCTGCAGTTGGTTGGTGGAGAAAAATTTAGGAGAG
CTAGTTCATAGATTTCAAGAGGAAGAAGTAAGTGGGGCCGCTCTTCTTGCACTTAATGAT
CGGATGGTTCAGCAACTGGTAAAGAAAATTGGGCACCAGGCTGTTCTGATGGATTTAATT
AAAAAATACAAGCAGAACACTCAAGGACTGAAGTCCCCAGAAAACCCCAAAAAGGCAGCC
CTGGTCATGCAAACAGAAGCAGCTCGAGATTACAGGGATGAAGAGTCCTCCAGTCCAGCC
AGGCATGGGGAGCAGATGCCATCTTTCTATCCAGCTGAAAACCTTGATAATGGACTAATT
GACCAAAGAGTATTGAAACAGAGAAGAAATGTGAAACAAATTCTAGCAAGAAGCAAAGCA
TTACAGTGGACGAAGTCCTATGTTTTACCAGAGTTTCCCTATGATGTCAAATGCATGTTA
GCAGAGCAGAAGTGCCCGGATCACAGCATGAGGATAAGGATCATTGAGTTTCTCCAGGCC
GACATGACTAAGTATCTGGAAGGCTCACTGTACCCCAGCACCCAGCAGTACAATGACGTG
GTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGCTGTGGCTTCTTTTTA
TGGAAACGAGCCCTCAAAGATCGCTTTAAATATGTTCGAAGACCCATAGAAGATGATGAG
CAAGTGATTAGAAATAAGTGTAAATTTGGACACCGAAGAGGCCAGACAAGGAAATCTCTT
GCTGATATAAGATTTGATGAAATTAAACTTGTCCAGATAAAAGAAGAAGCTGTTTGTTTT
GATTCTGAGCTAGATGAACATATTAAGTGGTTCCAGCAAGAATACGTGAAAACAGAAAAG
GACTGGAGAGAAATTGACAAGAGAATGAGCCAAACTTTGGAAATAAGAAGAAAGATGATT
GGCAGCCGAACACCTCTGAAGGACATTCTTAAACTGTTTCCTTTCTTGAAGTGCCCTTAT
CAGATGTTCAGAGAATTCCAACTTCTTACAAGAACAGATATTTATAAGAAAACAAGGCAC
ATTTTGGAATCCTATTCAGAAAATATACTGACTTCTTTTTCAGTGGTGGACAATCCAATC
AATATTGTATTGCAAGAAAAAATGAAACATTACACAGATGAAGACATGTTGAAATACATG
AAGATGACAGCCACATGTTTACTCCTCCCAGATGTTTTTGGGGATGATCCCAGCCTTTTT
GTCATCATGAATGAACAGGTGCAAGTGTCCACACCTGTGTTGGAAGTTAAAAACCCTTTC
AACATGGAGGTCTGCGAATTTTCTTTATATTTAGAAAGGGAGAGGCTCACAAAGGTGGAC
GACTGTGTTACAGCCTTGGCTGCGCTAGTAGCTGCCTTTCATGTATTTAGGATTGAGTGT
CCAAGAAGACTGTCCCAAACTTTCAACTTCCTAGAAACGCTGATTTTCGATATGCACAGT
CCTTATTTTCCTTCTTTGAAAGAAAAGGAAAACGAAGTAGGATTTCAGCACCCACTCACT

ORF Protein

Cloned ORF protein sequence for pFN21AE0041 Download

>KIEE0041  520 aa
METWSVEQVCSWLVEKNLGELVHRFQEEEVSGAALLALNDRMVQQLVKKIGHQAVLMDLI
KKYKQNTQGLKSPENPKKAALVMQTEAARDYRDEESSSPARHGEQMPSFYPAENLDNGLI
DQRVLKQRRNVKQILARSKALQWTKSYVLPEFPYDVKCMLAEQKCPDHSMRIRIIEFLQA
DMTKYLEGSLYPSTQQYNDVVNALLQAHPFLDEDGCGFFLWKRALKDRFKYVRRPIEDDE
QVIRNKCKFGHRRGQTRKSLADIRFDEIKLVQIKEEAVCFDSELDEHIKWFQQEYVKTEK
DWREIDKRMSQTLEIRRKMIGSRTPLKDILKLFPFLKCPYQMFREFQLLTRTDIYKKTRH
ILESYSENILTSFSVVDNPINIVLQEKMKHYTDEDMLKYMKMTATCLLLPDVFGDDPSLF
VIMNEQVQVSTPVLEVKNPFNMEVCEFSLYLERERLTKVDDCVTALAALVAAFHVFRIEC
PRRLSQTFNFLETLIFDMHSPYFPSLKEKENEVGFQHPLT

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0041 Download

>pFN21AE0041  6265 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAAACCTGGTCAGTTGAGCAGGTCTGCAGTTG
GTTGGTGGAGAAAAATTTAGGAGAGCTAGTTCATAGATTTCAAGAGGAAGAAGTAAGTGG
GGCCGCTCTTCTTGCACTTAATGATCGGATGGTTCAGCAACTGGTAAAGAAAATTGGGCA
CCAGGCTGTTCTGATGGATTTAATTAAAAAATACAAGCAGAACACTCAAGGACTGAAGTC
CCCAGAAAACCCCAAAAAGGCAGCCCTGGTCATGCAAACAGAAGCAGCTCGAGATTACAG
GGATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAGCAGATGCCATCTTTCTATCCAGC
TGAAAACCTTGATAATGGACTAATTGACCAAAGAGTATTGAAACAGAGAAGAAATGTGAA
ACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGACGAAGTCCTATGTTTTACCAGAGTT
TCCCTATGATGTCAAATGCATGTTAGCAGAGCAGAAGTGCCCGGATCACAGCATGAGGAT
AAGGATCATTGAGTTTCTCCAGGCCGACATGACTAAGTATCTGGAAGGCTCACTGTACCC
CAGCACCCAGCAGTACAATGACGTGGTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGA
TGAGGATGGCTGTGGCTTCTTTTTATGGAAACGAGCCCTCAAAGATCGCTTTAAATATGT
TCGAAGACCCATAGAAGATGATGAGCAAGTGATTAGAAATAAGTGTAAATTTGGACACCG
AAGAGGCCAGACAAGGAAATCTCTTGCTGATATAAGATTTGATGAAATTAAACTTGTCCA
GATAAAAGAAGAAGCTGTTTGTTTTGATTCTGAGCTAGATGAACATATTAAGTGGTTCCA
GCAAGAATACGTGAAAACAGAAAAGGACTGGAGAGAAATTGACAAGAGAATGAGCCAAAC
TTTGGAAATAAGAAGAAAGATGATTGGCAGCCGAACACCTCTGAAGGACATTCTTAAACT
GTTTCCTTTCTTGAAGTGCCCTTATCAGATGTTCAGAGAATTCCAACTTCTTACAAGAAC
AGATATTTATAAGAAAACAAGGCACATTTTGGAATCCTATTCAGAAAATATACTGACTTC
TTTTTCAGTGGTGGACAATCCAATCAATATTGTATTGCAAGAAAAAATGAAACATTACAC
AGATGAAGACATGTTGAAATACATGAAGATGACAGCCACATGTTTACTCCTCCCAGATGT
TTTTGGGGATGATCCCAGCCTTTTTGTCATCATGAATGAACAGGTGCAAGTGTCCACACC
TGTGTTGGAAGTTAAAAACCCTTTCAACATGGAGGTCTGCGAATTTTCTTTATATTTAGA
AAGGGAGAGGCTCACAAAGGTGGACGACTGTGTTACAGCCTTGGCTGCGCTAGTAGCTGC
CTTTCATGTATTTAGGATTGAGTGTCCAAGAAGACTGTCCCAAACTTTCAACTTCCTAGA
AACGCTGATTTTCGATATGCACAGTCCTTATTTTCCTTCTTTGAAAGAAAAGGAAAACGA
AGTAGGATTTCAGCACCCACTCACTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCC
TCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAG
CTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTT
CGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGA
AAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGC
TGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAG
ATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAA
TGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATC
CGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGT
GGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGG
AAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGC
CTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG
GGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTT
CGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTA
TTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAAT
GACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGA
GAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACA
ACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACT
CGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACC
ACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACT
CTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTT
CTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGT
GGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTT
ATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATA
GGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGG
TATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAA
AGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGG
CGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGA
GGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCG
TGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGG
GAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTC
GCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCG
GTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCA
CTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGT
GGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAG
TTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCG
GTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATC
CTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTT
TGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAG
GAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAG
TGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTA
AAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTC
TGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAA
ATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATG
CGTCCGGCGTAGAGGATCGAGATCT