SAMD3 ORF clone FXC06723

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Flexi ORF Clone FXC06723

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Clone info.

Species

human

Clone Name

pF1KE0041 Sequence (with vector) Restriction Map

Product ID

FXC06723

HaloTag Clone PID

FHC06723

ORF Sequence

DNA sequence (1560 bp)
Protein sequence (520 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527209]

Gene

KIEE0041

Symbol

SAMD3

Description

sterile alpha motif domain containing 3, transcript variant 1

Original Clone ID

oc00741

Features of the cloned ORF sequence

Description

Length: 1560 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 520 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS34539.1 3.3e-214 100.0 SAMD3 CCDS64525.1 3.5e-214 100.0 SAMD3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR021129 3 64 PF00536 Sterile alpha motif HMMSmart IPR001660 1 66 SM00454 Sterile alpha motif domain ProfileScan IPR001660 4 51 PS50105 Sterile alpha motif domain Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0041 Download

>KIEE0041  1560 bp
ATGGAAACCTGGTCAGTTGAGCAGGTCTGCAGTTGGTTGGTGGAGAAAAATTTAGGAGAG
CTAGTTCATAGATTTCAAGAGGAAGAAGTAAGTGGGGCCGCTCTTCTTGCACTTAATGAT
CGGATGGTTCAGCAACTGGTAAAGAAAATTGGGCACCAGGCTGTTCTGATGGATTTAATT
AAAAAATACAAGCAGAACACTCAAGGACTGAAGTCCCCAGAAAACCCCAAAAAGGCAGCC
CTGGTCATGCAAACAGAAGCAGCTCGAGATTACAGGGATGAAGAGTCCTCCAGTCCAGCC
AGGCATGGGGAGCAGATGCCATCTTTCTATCCAGCTGAAAACCTTGATAATGGACTAATT
GACCAAAGAGTATTGAAACAGAGAAGAAATGTGAAACAAATTCTAGCAAGAAGCAAAGCA
TTACAGTGGACGAAGTCCTATGTTTTACCAGAGTTTCCCTATGATGTCAAATGCATGTTA
GCAGAGCAGAAGTGCCCGGATCACAGCATGAGGATAAGGATCATTGAGTTTCTCCAGGCC
GACATGACTAAGTATCTGGAAGGCTCACTGTACCCCAGCACCCAGCAGTACAATGACGTG
GTTAATGCCCTGCTGCAGGCCCACCCTTTCCTGGATGAGGATGGCTGTGGCTTCTTTTTA
TGGAAACGAGCCCTCAAAGATCGCTTTAAATATGTTCGAAGACCCATAGAAGATGATGAG
CAAGTGATTAGAAATAAGTGTAAATTTGGACACCGAAGAGGCCAGACAAGGAAATCTCTT
GCTGATATAAGATTTGATGAAATTAAACTTGTCCAGATAAAAGAAGAAGCTGTTTGTTTT
GATTCTGAGCTAGATGAACATATTAAGTGGTTCCAGCAAGAATACGTGAAAACAGAAAAG
GACTGGAGAGAAATTGACAAGAGAATGAGCCAAACTTTGGAAATAAGAAGAAAGATGATT
GGCAGCCGAACACCTCTGAAGGACATTCTTAAACTGTTTCCTTTCTTGAAGTGCCCTTAT
CAGATGTTCAGAGAATTCCAACTTCTTACAAGAACAGATATTTATAAGAAAACAAGGCAC
ATTTTGGAATCCTATTCAGAAAATATACTGACTTCTTTTTCAGTGGTGGACAATCCAATC
AATATTGTATTGCAAGAAAAAATGAAACATTACACAGATGAAGACATGTTGAAATACATG
AAGATGACAGCCACATGTTTACTCCTCCCAGATGTTTTTGGGGATGATCCCAGCCTTTTT
GTCATCATGAATGAACAGGTGCAAGTGTCCACACCTGTGTTGGAAGTTAAAAACCCTTTC
AACATGGAGGTCTGCGAATTTTCTTTATATTTAGAAAGGGAGAGGCTCACAAAGGTGGAC
GACTGTGTTACAGCCTTGGCTGCGCTAGTAGCTGCCTTTCATGTATTTAGGATTGAGTGT
CCAAGAAGACTGTCCCAAACTTTCAACTTCCTAGAAACGCTGATTTTCGATATGCACAGT
CCTTATTTTCCTTCTTTGAAAGAAAAGGAAAACGAAGTAGGATTTCAGCACCCACTCACT

ORF Protein

Cloned ORF protein sequence for pF1KE0041 Download

>KIEE0041  520 aa
METWSVEQVCSWLVEKNLGELVHRFQEEEVSGAALLALNDRMVQQLVKKIGHQAVLMDLI
KKYKQNTQGLKSPENPKKAALVMQTEAARDYRDEESSSPARHGEQMPSFYPAENLDNGLI
DQRVLKQRRNVKQILARSKALQWTKSYVLPEFPYDVKCMLAEQKCPDHSMRIRIIEFLQA
DMTKYLEGSLYPSTQQYNDVVNALLQAHPFLDEDGCGFFLWKRALKDRFKYVRRPIEDDE
QVIRNKCKFGHRRGQTRKSLADIRFDEIKLVQIKEEAVCFDSELDEHIKWFQQEYVKTEK
DWREIDKRMSQTLEIRRKMIGSRTPLKDILKLFPFLKCPYQMFREFQLLTRTDIYKKTRH
ILESYSENILTSFSVVDNPINIVLQEKMKHYTDEDMLKYMKMTATCLLLPDVFGDDPSLF
VIMNEQVQVSTPVLEVKNPFNMEVCEFSLYLERERLTKVDDCVTALAALVAAFHVFRIEC
PRRLSQTFNFLETLIFDMHSPYFPSLKEKENEVGFQHPLT

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0041 Download

>pF1KE0041  4673 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAAACCTGG
TCAGTTGAGCAGGTCTGCAGTTGGTTGGTGGAGAAAAATTTAGGAGAGCTAGTTCATAGA
TTTCAAGAGGAAGAAGTAAGTGGGGCCGCTCTTCTTGCACTTAATGATCGGATGGTTCAG
CAACTGGTAAAGAAAATTGGGCACCAGGCTGTTCTGATGGATTTAATTAAAAAATACAAG
CAGAACACTCAAGGACTGAAGTCCCCAGAAAACCCCAAAAAGGCAGCCCTGGTCATGCAA
ACAGAAGCAGCTCGAGATTACAGGGATGAAGAGTCCTCCAGTCCAGCCAGGCATGGGGAG
CAGATGCCATCTTTCTATCCAGCTGAAAACCTTGATAATGGACTAATTGACCAAAGAGTA
TTGAAACAGAGAAGAAATGTGAAACAAATTCTAGCAAGAAGCAAAGCATTACAGTGGACG
AAGTCCTATGTTTTACCAGAGTTTCCCTATGATGTCAAATGCATGTTAGCAGAGCAGAAG
TGCCCGGATCACAGCATGAGGATAAGGATCATTGAGTTTCTCCAGGCCGACATGACTAAG
TATCTGGAAGGCTCACTGTACCCCAGCACCCAGCAGTACAATGACGTGGTTAATGCCCTG
CTGCAGGCCCACCCTTTCCTGGATGAGGATGGCTGTGGCTTCTTTTTATGGAAACGAGCC
CTCAAAGATCGCTTTAAATATGTTCGAAGACCCATAGAAGATGATGAGCAAGTGATTAGA
AATAAGTGTAAATTTGGACACCGAAGAGGCCAGACAAGGAAATCTCTTGCTGATATAAGA
TTTGATGAAATTAAACTTGTCCAGATAAAAGAAGAAGCTGTTTGTTTTGATTCTGAGCTA
GATGAACATATTAAGTGGTTCCAGCAAGAATACGTGAAAACAGAAAAGGACTGGAGAGAA
ATTGACAAGAGAATGAGCCAAACTTTGGAAATAAGAAGAAAGATGATTGGCAGCCGAACA
CCTCTGAAGGACATTCTTAAACTGTTTCCTTTCTTGAAGTGCCCTTATCAGATGTTCAGA
GAATTCCAACTTCTTACAAGAACAGATATTTATAAGAAAACAAGGCACATTTTGGAATCC
TATTCAGAAAATATACTGACTTCTTTTTCAGTGGTGGACAATCCAATCAATATTGTATTG
CAAGAAAAAATGAAACATTACACAGATGAAGACATGTTGAAATACATGAAGATGACAGCC
ACATGTTTACTCCTCCCAGATGTTTTTGGGGATGATCCCAGCCTTTTTGTCATCATGAAT
GAACAGGTGCAAGTGTCCACACCTGTGTTGGAAGTTAAAAACCCTTTCAACATGGAGGTC
TGCGAATTTTCTTTATATTTAGAAAGGGAGAGGCTCACAAAGGTGGACGACTGTGTTACA
GCCTTGGCTGCGCTAGTAGCTGCCTTTCATGTATTTAGGATTGAGTGTCCAAGAAGACTG
TCCCAAACTTTCAACTTCCTAGAAACGCTGATTTTCGATATGCACAGTCCTTATTTTCCT
TCTTTGAAAGAAAAGGAAAACGAAGTAGGATTTCAGCACCCACTCACTGTTTAAACGAAT
TCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGC
TGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGC
ATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTAT
ATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACT
GCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCT
GACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCT
TTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCT
GGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCG
CCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTT
CGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTA
TTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTG
TCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAA
CTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCT
GTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGG
CAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCA
ATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACAT
CGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGAC
GAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCG
GATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAA
AATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAG
GACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGC
TTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTT
CTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCA
ACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGC
AGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTT
GCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAG
TCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTC
CCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCC
TTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGT
CGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTT
ATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGC
AGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAA
GTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAA
GCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGG
TAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGA
AGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGG
GATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAA
TACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGC
TTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATAC
GGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTAC
CTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTAT
GGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCA
CGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACG
CAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGA
CCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCA
TGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGG
CCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGG
GAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCAT
AAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTC
TACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT