POU4F2 ORF clone pFN21AB9722

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB9722

How to Order Order Information

Clone info.

Species

human

Clone Name

pFN21AB9722 Sequence (with vector) Restriction Map

Product ID

FHC16524

ORF Sequence

DNA sequence (1230 bp)
Protein sequence (410 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIBB9722

Symbol

POU4F2

Alias : BRN3.2, BRN3B, Brn-3b

Description

POU class 4 homeobox 2

Original Clone ID

cp00305

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1230 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 410 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS34074.1 1.7e-75 99.8 POU4F2 CCDS4281.1 1.8e-30 70.7 POU4F3 CCDS31996.1 3.7e-25 58.9 POU4F1 CCDS5040.1 2.7e-14 35.2 POU3F2 CCDS58190.1 5.4e-11 35.9 POU2F3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR013847 270 287 PR00028 POU IPR013847 296 309 PR00028 POU IPR013847 312 327 PR00028 POU IPR013847 345 365 PR00028 POU IPR013847 380 395 PR00028 POU HMMPfam IPR000327 254 328 PF00157 POU-specific IPR001356 347 403 PF00046 Homeobox HMMSmart IPR000327 251 328 SM00352 POU-specific IPR001356 346 408 SM00389 Homeobox ProfileScan IPR000327 251 328 PS51179 POU-specific IPR001356 344 404 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004566 409 113725 99.8 100.0 NP_002691 338 602459,602460 70.7 80.5 NP_005595 443 600494 35.2 94.6 NP_001231611 438 607394 35.9 82.2 NP_002690 451 602479 36.5 96.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9722 Download

>KIBB9722  1230 bp
ATGATGATGATGTCCCTGAACAGCAAGCAGGCGTTTAGCATGCCGCACGGCGGCAGCCTG
CACGTGGAGCCCAAGTACTCGGCACTGCACAGCACCTCGCCGGGCTCCTCGGCTCCCATC
GCGCCCTCGGCCAGCTCCCCCAGCAGCTCGAGCAACGCTGGTGGTGGCGGCGGCGGCGGC
GGCGGCGGCGGCGGCGGCGGCGGAGGCCGAAGCAGCAGCTCCAGCAGCAGTGGCAGCAGC
GGCGGCGGGGGCTCGGAGGCTATGCGGAGAGCCTGTCTTCCAACCCCACCGAGCAATATA
TTCGGCGGGCTGGATGAGAGTCTGCTGGCCCGCGCCGAGGCTCTGGCAGCCGTGGACATC
GTCTCCCAGAGCAAGAGCCACCACCACCATCCACCCCACCACAGCCCCTTCAAACCGGAC
GCCACCTACCACACTATGAATACCATCCCGTGCACGTCGGCCGCCTCTTCTTCATCGGTG
CCCATCTCGCACCCTTCCGCGTTGGCGGGCACGCACCACCACCACCACCATCACCACCAC
CACCACCACCAACCGCACCAGGCGCTGGAGGGCGAGCTGCTGGAGCACCTGAGTCCCGGG
CTGGCCCTGGGCGCTATGGCGGGCCCCGACGGCGCTGTGGTGTCCACGCCGGCTCACGCG
CCGCACATGGCCACCATGAACCCCATGCACCAAGCAGCGCTCAGCATGGCCCACGCGCAC
GGGCTGCCGTCGCACATGGGCTGCATGAGCGACGTGGACGCCGACCCGCGGGACCTGGAG
GCATTCGCCGAGCGCTTCAAGCAGCGACGCATCAAGCTGGGGGTGACCCAGGCAGATGTG
GGCTCCGCGCTGGCCAACCTCAAGATCCCCGGCGTGGGCTCGCTTAGCCAGAGCACCATC
TGCAGGTTCGAGTCCCTCACACTGTCCCACAATAATATGATCGCGCTCAAACCCATCCTG
CAGGCATGGCTCGAGGAGGCCGAGAAGTCCCACCGCGAGAAGCTCACCAAGCCTGAACTC
TTCAATGGCGCGGAGAAGAAGCGCAAGCGCACGTCCATCGCTGCGCCAGAGAAGCGCTCG
CTCGAAGCCTACTTTGCCATTCAGCCTCGGCCCTCCTCTGAAAAGATCGCCGCCATCGCG
GAGAAGCTGGACCTGAAGAAAAACGTGGTGCGCGTCTGGTTCTGCAACCAGAGGCAGAAA
CAGAAAAGAATGAAATATTCCGCCGGCATT

ORF Protein

Cloned ORF protein sequence for pFN21AB9722 Download

>KIBB9722  410 aa
MMMMSLNSKQAFSMPHGGSLHVEPKYSALHSTSPGSSAPIAPSASSPSSSSNAGGGGGGG
GGGGGGGGGRSSSSSSSGSSGGGGSEAMRRACLPTPPSNIFGGLDESLLARAEALAAVDI
VSQSKSHHHHPPHHSPFKPDATYHTMNTIPCTSAASSSSVPISHPSALAGTHHHHHHHHH
HHHQPHQALEGELLEHLSPGLALGAMAGPDGAVVSTPAHAPHMATMNPMHQAALSMAHAH
GLPSHMGCMSDVDADPRDLEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTI
CRFESLTLSHNNMIALKPILQAWLEEAEKSHREKLTKPELFNGAEKKRKRTSIAAPEKRS
LEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAGI

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9722 Download

>pFN21AB9722  5935 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGATGATGATGTCCCTGAACAGCAAGCAGGCGTT
TAGCATGCCGCACGGCGGCAGCCTGCACGTGGAGCCCAAGTACTCGGCACTGCACAGCAC
CTCGCCGGGCTCCTCGGCTCCCATCGCGCCCTCGGCCAGCTCCCCCAGCAGCTCGAGCAA
CGCTGGTGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGCCGAAGCAG
CAGCTCCAGCAGCAGTGGCAGCAGCGGCGGCGGGGGCTCGGAGGCTATGCGGAGAGCCTG
TCTTCCAACCCCACCGAGCAATATATTCGGCGGGCTGGATGAGAGTCTGCTGGCCCGCGC
CGAGGCTCTGGCAGCCGTGGACATCGTCTCCCAGAGCAAGAGCCACCACCACCATCCACC
CCACCACAGCCCCTTCAAACCGGACGCCACCTACCACACTATGAATACCATCCCGTGCAC
GTCGGCCGCCTCTTCTTCATCGGTGCCCATCTCGCACCCTTCCGCGTTGGCGGGCACGCA
CCACCACCACCACCATCACCACCACCACCACCACCAACCGCACCAGGCGCTGGAGGGCGA
GCTGCTGGAGCACCTGAGTCCCGGGCTGGCCCTGGGCGCTATGGCGGGCCCCGACGGCGC
TGTGGTGTCCACGCCGGCTCACGCGCCGCACATGGCCACCATGAACCCCATGCACCAAGC
AGCGCTCAGCATGGCCCACGCGCACGGGCTGCCGTCGCACATGGGCTGCATGAGCGACGT
GGACGCCGACCCGCGGGACCTGGAGGCATTCGCCGAGCGCTTCAAGCAGCGACGCATCAA
GCTGGGGGTGACCCAGGCAGATGTGGGCTCCGCGCTGGCCAACCTCAAGATCCCCGGCGT
GGGCTCGCTTAGCCAGAGCACCATCTGCAGGTTCGAGTCCCTCACACTGTCCCACAATAA
TATGATCGCGCTCAAACCCATCCTGCAGGCATGGCTCGAGGAGGCCGAGAAGTCCCACCG
CGAGAAGCTCACCAAGCCTGAACTCTTCAATGGCGCGGAGAAGAAGCGCAAGCGCACGTC
CATCGCTGCGCCAGAGAAGCGCTCGCTCGAAGCCTACTTTGCCATTCAGCCTCGGCCCTC
CTCTGAAAAGATCGCCGCCATCGCGGAGAAGCTGGACCTGAAGAAAAACGTGGTGCGCGT
CTGGTTCTGCAACCAGAGGCAGAAACAGAAAAGAATGAAATATTCCGCCGGCATTGTTTA
AACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTG
ATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAAT
AACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAG
TTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGAT
GCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGC
ATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAAC
CTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTT
GTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCT
TTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACC
CCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCC
TGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTC
GCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTG
GTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGAT
CTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGC
ACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAA
CTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAA
AAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGT
GATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCT
TTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAAT
GAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTG
CGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGG
ATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTT
ATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGG
CCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATG
GATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTC
GAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGT
TATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGG
CCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACG
AGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGAT
ACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTA
CCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCT
GTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCC
CCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAA
GACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATG
TAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAG
TATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTT
GATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTA
CGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTC
AGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCA
CCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGA
TGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTAC
CCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTT
TCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTA
GCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATC
GAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT