POU3F1 ORF clone pFN21AB9638

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB9638

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Clone info.

Species

human

Clone Name

pFN21AB9638 Sequence (with vector) Restriction Map

Product ID

FHC27644

ORF Sequence

DNA sequence (1353 bp)
Protein sequence (451 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIBB9638

Symbol

POU3F1

Alias : OCT6, OTF6, SCIP

Description

POU class 3 homeobox 1

Original Clone ID

cp00221

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1353 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 451 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS30679.1 3e-100 100.0 POU3F1 CCDS33265.1 1.2e-35 50.5 POU3F3 CCDS5040.1 8.6e-34 51.1 POU3F2 CCDS14450.1 3e-27 52.1 POU3F4 CCDS8431.1 6.6e-18 49.1 POU2F3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR013847 266 283 PR00028 POU IPR013847 289 302 PR00028 POU IPR013847 305 320 PR00028 POU IPR013847 338 358 PR00028 POU IPR013847 373 388 PR00028 POU HMMPfam IPR000327 248 321 PF00157 POU-specific IPR001356 340 396 PF00046 Homeobox HMMSmart IPR000327 247 321 SM00352 POU-specific IPR001356 339 401 SM00389 Homeobox ProfileScan IPR000327 247 321 PS51179 POU-specific IPR001356 337 397 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_002690 451 602479 100.0 100.0 NP_006227 500 602480 50.5 97.8 NP_005595 443 600494 51.1 90.0 NP_000298 361 300039,304400 52.1 82.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9638 Download

>KIBB9638  1353 bp
ATGGCCACCACCGCGCAGTACCTGCCGCGGGGCCCCGGTGGCGGAGCCGGGGGCACCGGG
CCGCTTATGCACCCGGACGCCGCGGCGGCGGCGGCGGCGGCGGCGGCCGCGGAGCGATTG
CATGCAGGGGCCGCGTACCGCGAAGTGCAGAAGCTGATGCACCACGAGTGGCTGGGCGCG
GGCGCGGGCCACCCCGTGGGCCTAGCGCACCCCCAGTGGCTACCCACGGGAGGAGGCGGC
GGCGGCGATTGGGCCGGCGGCCCGCACCTAGAACACGGCAAGGCAGGCGGCGGCGGCACC
GGCCGAGCCGACGACGGCGGCGGCGGCGGAGGTTTCCACGCGCGCCTGGTGCACCAGGGG
GCGGCCCACGCGGGCGCGGCATGGGCGCAGGGCAGCACAGCGCACCACTTGGGCCCGGCC
ATGTCGCCCTCGCCCGGGGCCAGCGGGGGCCACCAGCCCCAGCCGCTCGGGCTGTACGCG
CAGGCGGCCTACCCGGGGGGCGGCGGCGGCGGCCTGGCCGGGATGCTGGCGGCGGGCGGT
GGCGGCGCGGGGCCGGGCCTGCACCACGCGCTGCACGAGGATGGCCACGAGGCGCAGCTG
GAGCCGTCGCCGCCGCCGCATCTGGGCGCCCACGGACACGCACACGGACATGCACACGCG
GGCGGCCTGCACGCGGCGGCGGCGCACCTGCACCCGGGCGCGGGCGGCGGCGGCTCATCG
GTGGGCGAGCACTCGGACGAGGATGCGCCCAGCTCGGACGACCTGGAGCAGTTCGCCAAG
CAGTTCAAGCAGCGGCGCATCAAGCTGGGCTTTACGCAGGCCGACGTGGGGCTGGCGCTG
GGCACGCTCTACGGTAACGTGTTCTCGCAGACCACCATCTGCCGCTTCGAGGCCCTGCAG
CTGAGCTTCAAGAACATGTGCAAGCTCAAGCCGCTGCTCAACAAGTGGCTGGAGGAGACC
GACTCGTCCAGCGGCAGCCCCACCAACCTGGACAAGATCGCGGCGCAGGGCCGCAAGCGC
AAGAAGCGCACGTCCATCGAGGTGGGGGTCAAAGGCGCGCTCGAGAGCCACTTTCTCAAG
TGCCCCAAGCCCTCGGCGCACGAGATCACCGGCTTGGCAGACAGCCTGCAGCTGGAGAAG
GAGGTGGTGCGCGTCTGGTTCTGCAACCGGCGGCAGAAGGAGAAGCGCATGACCCCTGCG
GCCGGCGCGGGCCACCCGCCCATGGACGATGTATACGCGCCTGGGGAGCTAGGGCCTGGC
GGGGGCGGCGCATCGCCACCCTCCGCGCCCCCACCGCCCCCGCCGGCGGCGCTGCACCAC
CACCACCACCACACACTGCCCGGCTCAGTGCAG

ORF Protein

Cloned ORF protein sequence for pFN21AB9638 Download

>KIBB9638  451 aa
MATTAQYLPRGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGA
GAGHPVGLAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQG
AAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGG
GGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSS
VGEHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQ
LSFKNMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLK
CPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPG
GGGASPPSAPPPPPPAALHHHHHHTLPGSVQ

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9638 Download

>pFN21AB9638  6058 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCACCACCGCGCAGTACCTGCCGCGGGGCCC
CGGTGGCGGAGCCGGGGGCACCGGGCCGCTTATGCACCCGGACGCCGCGGCGGCGGCGGC
GGCGGCGGCGGCCGCGGAGCGATTGCATGCAGGGGCCGCGTACCGCGAAGTGCAGAAGCT
GATGCACCACGAGTGGCTGGGCGCGGGCGCGGGCCACCCCGTGGGCCTAGCGCACCCCCA
GTGGCTACCCACGGGAGGAGGCGGCGGCGGCGATTGGGCCGGCGGCCCGCACCTAGAACA
CGGCAAGGCAGGCGGCGGCGGCACCGGCCGAGCCGACGACGGCGGCGGCGGCGGAGGTTT
CCACGCGCGCCTGGTGCACCAGGGGGCGGCCCACGCGGGCGCGGCATGGGCGCAGGGCAG
CACAGCGCACCACTTGGGCCCGGCCATGTCGCCCTCGCCCGGGGCCAGCGGGGGCCACCA
GCCCCAGCCGCTCGGGCTGTACGCGCAGGCGGCCTACCCGGGGGGCGGCGGCGGCGGCCT
GGCCGGGATGCTGGCGGCGGGCGGTGGCGGCGCGGGGCCGGGCCTGCACCACGCGCTGCA
CGAGGATGGCCACGAGGCGCAGCTGGAGCCGTCGCCGCCGCCGCATCTGGGCGCCCACGG
ACACGCACACGGACATGCACACGCGGGCGGCCTGCACGCGGCGGCGGCGCACCTGCACCC
GGGCGCGGGCGGCGGCGGCTCATCGGTGGGCGAGCACTCGGACGAGGATGCGCCCAGCTC
GGACGACCTGGAGCAGTTCGCCAAGCAGTTCAAGCAGCGGCGCATCAAGCTGGGCTTTAC
GCAGGCCGACGTGGGGCTGGCGCTGGGCACGCTCTACGGTAACGTGTTCTCGCAGACCAC
CATCTGCCGCTTCGAGGCCCTGCAGCTGAGCTTCAAGAACATGTGCAAGCTCAAGCCGCT
GCTCAACAAGTGGCTGGAGGAGACCGACTCGTCCAGCGGCAGCCCCACCAACCTGGACAA
GATCGCGGCGCAGGGCCGCAAGCGCAAGAAGCGCACGTCCATCGAGGTGGGGGTCAAAGG
CGCGCTCGAGAGCCACTTTCTCAAGTGCCCCAAGCCCTCGGCGCACGAGATCACCGGCTT
GGCAGACAGCCTGCAGCTGGAGAAGGAGGTGGTGCGCGTCTGGTTCTGCAACCGGCGGCA
GAAGGAGAAGCGCATGACCCCTGCGGCCGGCGCGGGCCACCCGCCCATGGACGATGTATA
CGCGCCTGGGGAGCTAGGGCCTGGCGGGGGCGGCGCATCGCCACCCTCCGCGCCCCCACC
GCCCCCGCCGGCGGCGCTGCACCACCACCACCACCACACACTGCCCGGCTCAGTGCAGGT
TTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAG
CTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGC
AATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGAT
GAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGT
GATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAAT
TGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAA
AACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCC
CTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTG
GCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGA
ACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAA
CCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGT
GTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACG
CTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTG
GATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATG
AGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAG
CAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACA
GAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATG
AGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACC
GCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTG
AATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACG
TTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGAC
TGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGG
TTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTG
GGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACT
ATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAA
TTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATAC
GGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAA
AGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTG
ACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAA
GATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGC
TTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCAC
GCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAAC
CCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGG
TAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGT
ATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGA
CAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCT
CTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGA
TTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACG
CTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCT
TCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTG
GGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTG
TACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGT
TTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTT
TTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCC
ATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT