FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9638, 451 aa 1>>>pF1KB9638 451 - 451 aa - 451 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.0854+/-0.000333; mu= 9.0912+/- 0.021 mean_var=287.3739+/-58.168, 0's: 0 Z-trim(124.6): 87 B-trim: 0 in 0/59 Lambda= 0.075657 statistics sampled from 46476 (46585) to 46476 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.802), E-opt: 0.2 (0.546), width: 16 Scan time: 10.230 The best scores are: opt bits E(85289) NP_002690 (OMIM: 602479) POU domain, class 3, tran ( 451) 3199 362.1 1.7e-99 NP_006227 (OMIM: 602480) POU domain, class 3, tran ( 500) 1240 148.4 4.2e-35 NP_005595 (OMIM: 600494) POU domain, class 3, tran ( 443) 1183 142.1 2.9e-33 NP_000298 (OMIM: 300039,304400) POU domain, class ( 361) 983 120.1 9.6e-27 XP_011541044 (OMIM: 607394) PREDICTED: POU domain, ( 403) 701 89.4 1.9e-17 XP_011541045 (OMIM: 607394) PREDICTED: POU domain, ( 403) 701 89.4 1.9e-17 XP_011541043 (OMIM: 607394) PREDICTED: POU domain, ( 403) 701 89.4 1.9e-17 XP_011541041 (OMIM: 607394) PREDICTED: POU domain, ( 432) 701 89.4 2e-17 XP_011541042 (OMIM: 607394) PREDICTED: POU domain, ( 432) 701 89.4 2e-17 NP_055167 (OMIM: 607394) POU domain, class 2, tran ( 436) 701 89.4 2e-17 NP_001231611 (OMIM: 607394) POU domain, class 2, t ( 438) 701 89.5 2e-17 XP_016872976 (OMIM: 607394) PREDICTED: POU domain, ( 356) 668 85.7 2.1e-16 XP_011507957 (OMIM: 164175) PREDICTED: POU domain, ( 671) 672 86.5 2.3e-16 NP_001185715 (OMIM: 164175) POU domain, class 2, t ( 703) 672 86.6 2.4e-16 XP_011507956 (OMIM: 164175) PREDICTED: POU domain, ( 743) 672 86.6 2.5e-16 NP_001185712 (OMIM: 164175) POU domain, class 2, t ( 755) 672 86.6 2.5e-16 NP_002688 (OMIM: 164175) POU domain, class 2, tran ( 766) 672 86.6 2.5e-16 XP_011507955 (OMIM: 164175) PREDICTED: POU domain, ( 769) 672 86.6 2.5e-16 NP_002692 (OMIM: 164177) POU domain, class 5, tran ( 360) 651 83.9 7.8e-16 NP_001272916 (OMIM: 164177) POU domain, class 5, t ( 265) 642 82.7 1.3e-15 NP_001153014 (OMIM: 615739) putative POU domain, c ( 359) 634 82.0 2.8e-15 NP_006228 (OMIM: 601632) POU domain, class 4, tran ( 419) 631 81.8 3.9e-15 NP_001116229 (OMIM: 173110,613038) pituitary-speci ( 317) 610 79.3 1.6e-14 NP_000297 (OMIM: 173110,613038) pituitary-specific ( 291) 604 78.6 2.4e-14 NP_004566 (OMIM: 113725) POU domain, class 4, tran ( 409) 526 70.3 1.1e-11 NP_001167002 (OMIM: 164177) POU domain, class 5, t ( 190) 515 68.7 1.5e-11 NP_976034 (OMIM: 164177) POU domain, class 5, tran ( 190) 515 68.7 1.5e-11 NP_002691 (OMIM: 602459,602460) POU domain, class ( 338) 508 68.2 3.7e-11 NP_001159490 (OMIM: 601583,609062) POU domain, cla ( 655) 401 56.9 1.8e-07 NP_001234923 (OMIM: 164176) POU domain, class 2, t ( 400) 387 55.1 3.9e-07 NP_002689 (OMIM: 164176) POU domain, class 2, tran ( 463) 387 55.2 4.3e-07 XP_011525344 (OMIM: 164176) PREDICTED: POU domain, ( 485) 387 55.2 4.4e-07 XP_005259067 (OMIM: 164176) PREDICTED: POU domain, ( 586) 387 55.3 4.9e-07 XP_016882382 (OMIM: 164176) PREDICTED: POU domain, ( 608) 387 55.4 5.1e-07 NP_001193955 (OMIM: 164176) POU domain, class 2, t ( 467) 382 54.7 6.3e-07 NP_001193954 (OMIM: 164176) POU domain, class 2, t ( 479) 382 54.7 6.4e-07 XP_011525343 (OMIM: 164176) PREDICTED: POU domain, ( 501) 382 54.7 6.6e-07 XP_011525345 (OMIM: 164176) PREDICTED: POU domain, ( 537) 382 54.7 6.8e-07 XP_016882385 (OMIM: 164176) PREDICTED: POU domain, ( 600) 382 54.8 7.3e-07 XP_016882383 (OMIM: 164176) PREDICTED: POU domain, ( 602) 382 54.8 7.3e-07 XP_016882384 (OMIM: 164176) PREDICTED: POU domain, ( 602) 382 54.8 7.3e-07 XP_011525342 (OMIM: 164176) PREDICTED: POU domain, ( 624) 382 54.8 7.5e-07 XP_016882381 (OMIM: 164176) PREDICTED: POU domain, ( 701) 382 54.9 8e-07 XP_016882380 (OMIM: 164176) PREDICTED: POU domain, ( 707) 382 54.9 8.1e-07 XP_016882378 (OMIM: 164176) PREDICTED: POU domain, ( 711) 382 54.9 8.1e-07 XP_016882375 (OMIM: 164176) PREDICTED: POU domain, ( 711) 382 54.9 8.1e-07 XP_016882379 (OMIM: 164176) PREDICTED: POU domain, ( 711) 382 54.9 8.1e-07 XP_016882377 (OMIM: 164176) PREDICTED: POU domain, ( 711) 382 54.9 8.1e-07 XP_016882376 (OMIM: 164176) PREDICTED: POU domain, ( 711) 382 54.9 8.1e-07 XP_016882373 (OMIM: 164176) PREDICTED: POU domain, ( 723) 382 54.9 8.2e-07 >>NP_002690 (OMIM: 602479) POU domain, class 3, transcri (451 aa) initn: 3199 init1: 3199 opt: 3199 Z-score: 1907.3 bits: 362.1 E(85289): 1.7e-99 Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 451 aa overlap (1-451:1-451) 10 20 30 40 50 60 pF1KB9 MATTAQYLPRGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 MATTAQYLPRGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 GAGHPVGLAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 GAGHPVGLAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 AAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 AAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 GGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 GGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 VGEHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 VGEHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB9 LSFKNMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 LSFKNMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB9 CPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 CPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPG 370 380 390 400 410 420 430 440 450 pF1KB9 GGGASPPSAPPPPPPAALHHHHHHTLPGSVQ ::::::::::::::::::::::::::::::: NP_002 GGGASPPSAPPPPPPAALHHHHHHTLPGSVQ 430 440 450 >>NP_006227 (OMIM: 602480) POU domain, class 3, transcri (500 aa) initn: 1088 init1: 1008 opt: 1240 Z-score: 751.2 bits: 148.4 E(85289): 4.2e-35 Smith-Waterman score: 1281; 50.5% identity (64.3% similar) in 493 aa overlap (11-451:39-500) 10 20 30 40 pF1KB9 MATTAQYLPRGPGGGAGGTGPLMHPDAAAAAAAAAAAERL : :::::: : :.: .::....: .. NP_006 YLPGNSLLAAGSIVHSDAAGAGGGGGGGGGGGGGGAGGGGGGMQPGSAAVTSGAYRGD-- 10 20 30 40 50 60 50 60 70 80 pF1KB9 HAGAAYREVQK-LMHHEWLGAGAGHPVGLAHPQW---LPTGGGGGG-----------DWA .. . ::. .:. ....:: .. :: :: :: ...... :. NP_006 --PSSVKMVQSDFMQGAMAASNGGHMLSHAH-QWVTALPHAAAAAAAAAAAAVEASSPWS 70 80 90 100 110 120 90 100 110 120 pF1KB9 GG---------------PHLEHGKAGGGGTGRADDGGGGGGFHARLV----------HQG :. : .: ::.:: :: .: ..: : ::: NP_006 GSAVGMAGSPQQPPQPPPPPPQGPDVKGGAGR-DDLHAGTALHHRGPPHLGPPPPPPHQG 130 140 150 160 170 180 130 140 150 160 170 pF1KB9 AAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGL-YAQAAYPGGGGGGLAGMLAA- . .: : ...: . : . :. .::.:: : .: :.: ::: . :::.: NP_006 HPGGWGAAAAAAAAAAAAAAAAHLPSMAGGQQPPPQSLLYSQ---PGGFT--VNGMLSAP 190 200 210 220 230 180 190 200 210 220 230 pF1KB9 -----GGGGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPG :::::: : . .: : : : : : :.: : : : . : : NP_006 PGPGGGGGGAGGGAQSLVHP-GLVRGDTPELAEH-HHHHHHHAHPHPPHPHHAQGPPHHG 240 250 260 270 280 290 240 250 260 270 280 pF1KB9 AGGGGSSVG-----EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVF .::::.. : :::::.:.::::::::::::::::::::::::::::::::::::: NP_006 GGGGGAGPGLNSHDPHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVF 300 310 320 330 340 350 290 300 310 320 330 340 pF1KB9 SQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEV :::::::::::::::::::::::::::::::.:::.::::..:::::::::::::::::: NP_006 SQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEV 360 370 380 390 400 410 350 360 370 380 390 400 pF1KB9 GVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPM .:::::::::::::::::.:::.:::::::::::::::::::::::::::: . . : NP_006 SVKGALESHFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRMTPPGIQQQTP- 420 430 440 450 460 470 410 420 430 440 450 pF1KB9 DDVYAPGELGPGGGGASPPSAPPPPPPAALHHHHHHTLPGSVQ ::::. ..: :: ::: :: : ::: NP_006 DDVYS--QVGT-------VSADTPPP--------HHGLQTSVQ 480 490 500 >>NP_005595 (OMIM: 600494) POU domain, class 3, transcri (443 aa) initn: 1163 init1: 995 opt: 1183 Z-score: 718.1 bits: 142.1 E(85289): 2.9e-33 Smith-Waterman score: 1238; 51.1% identity (65.0% similar) in 460 aa overlap (22-427:11-441) 10 20 30 40 50 60 pF1KB9 MATTAQYLPRGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGA :. .:. . : .. . ::. :::.:.:.. .. :: NP_005 MATAASNHYSLLTSSASIVHAEPPGGMQQGAGG-YREAQSLVQGDY-GA 10 20 30 40 70 80 90 100 pF1KB9 --GAGHPVGLAHPQW---LPTGGGGGGDWAGGPHLEHGKAGGGGT--------------- . :::.. :: :: : :::::: .:: : .:: :. NP_005 LQSNGHPLSHAH-QWITALSHGGGGGGGGGGGGGGGGGGGGGDGSPWSTSPLGQPDIKPS 50 60 70 80 90 100 110 120 pF1KB9 ------GRADDGGGGGGFHAR--------------------------LVHQGAAH--AGA ::.:. : :... . :::..: : . . NP_005 VVVQQGGRGDELHGPGALQQQHQQQQQQQQQQQQQQQQQQQQQRPPHLVHHAANHHPGPG 110 120 130 140 150 160 130 140 150 160 170 180 pF1KB9 AWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPG :: ....: :: :.: :::.: ::.: .. . :::.::: : : NP_005 AWRSAAAAAHLPPSM----GASNGGL-----LYSQPSFT------VNGMLGAGGQPA--G 170 180 190 200 190 200 210 220 230 240 pF1KB9 LHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHSD ::: .:.:. : : : : :.: : . :: :. . ::: NP_005 LHHHGLRDAHDE------PHHADHHPHPHSHPHQQPPPPPPPQGPPGHPGAHHD--PHSD 210 220 230 240 250 260 250 260 270 280 290 300 pF1KB9 EDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNM ::.:.::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 EDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNM 270 280 290 300 310 320 310 320 330 340 350 360 pF1KB9 CKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSA :::::::::::::.::::::::..::::::::::::::::::.::::::::::::::::: NP_005 CKLKPLLNKWLEEADSSSGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSA 330 340 350 360 370 380 370 380 390 400 410 420 pF1KB9 HEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPGGGGASP .:::.:::::::::::::::::::::::::::: .:. : .:::. .. : :.. NP_005 QEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGGT-LPGAEDVYGGSRDTPPHHGVQT 390 400 410 420 430 440 430 440 450 pF1KB9 PSAPPPPPPAALHHHHHHTLPGSVQ : NP_005 PVQ >>NP_000298 (OMIM: 300039,304400) POU domain, class 3, t (361 aa) initn: 1035 init1: 963 opt: 983 Z-score: 601.1 bits: 120.1 E(85289): 9.6e-27 Smith-Waterman score: 1064; 52.1% identity (68.4% similar) in 376 aa overlap (40-413:25-349) 10 20 30 40 50 60 pF1KB9 RGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWL-GAGA-GHPVG .. :. .:. :::.. ..: :. . :::.: NP_000 MATAASNPYSILSSTSLVHADSAGMQQGSPFRNPQKLLQSDYLQGVPSNGHPLG 10 20 30 40 50 70 80 90 100 110 120 pF1KB9 LAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAA : .:. :. . :: :.. :: : :. ..:. . :. : NP_000 --H-HWV-TSLSDGGPWSSTLATSPLDQQDVKPGREDLQLGA------IIHHRSPHV--A 60 70 80 90 100 130 140 150 160 170 180 pF1KB9 WAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGL . : : . . ::.:. : . :::..:.: :: ..::: :: :. NP_000 HHSPHTNHPNAWGASPAPNPSITSSGQPLNVYSQ---PG---FTVSGMLEHGGLTPPPAA 110 120 130 140 150 190 200 210 220 230 240 pF1KB9 HHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHSDE : .. : . :: .::.: : . .:::: NP_000 ASA--QSLHPVLREPPDHGELGSH-HCQ---------------------------DHSDE 160 170 180 250 260 270 280 290 300 pF1KB9 DAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMC ..:.::.::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 ETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMC 190 200 210 220 230 240 310 320 330 340 350 360 pF1KB9 KLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAH ::::::::::::.:::.::::..::::::::::::::::::.:::.::.::::::::.:. NP_000 KLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 250 260 270 280 290 300 370 380 390 400 410 420 pF1KB9 EITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPGGGGASPP ::..:::::::::::::::::::::::::::: : .: .::. NP_000 EISSLADSLQLEKEVVRVWFCNRRQKEKRMTPP-GDQQP--HEVYSHTVKTDTSCHDL 310 320 330 340 350 360 430 440 450 pF1KB9 SAPPPPPPAALHHHHHHTLPGSVQ >>XP_011541044 (OMIM: 607394) PREDICTED: POU domain, cla (403 aa) initn: 705 init1: 383 opt: 701 Z-score: 434.3 bits: 89.4 E(85289): 1.9e-17 Smith-Waterman score: 707; 49.1% identity (67.6% similar) in 275 aa overlap (184-450:109-346) 160 170 180 190 200 210 pF1KB9 QPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGH :::: : . :: . : ::: : : XP_011 LSQTQPGQQGLQPNLLPFPQQQSGLLLPQTGPGL--ASQAFGHPGLPGSSLEPHLEASQH 80 90 100 110 120 130 220 230 240 250 260 270 pF1KB9 AHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHSDEDAPSS-DDLEQFAKQFKQRRIKLGFT . :: :..::. : ::. ..::.::: ::::::::::: XP_011 L----------PVPKHL-PSSGGA----------DEPSDLEELEKFAKTFKQRRIKLGFT 140 150 160 170 280 290 300 310 320 pF1KB9 QADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEE-----TDSSSGSP :.:::::.: :::: :::::: :::::.:::::::::::::.:::.. .: : ..: XP_011 QGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPSDPSVSTP 180 190 200 210 220 230 330 340 350 360 370 380 pF1KB9 TNLDKIAAQ-GRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVW .. ... :::::::::::.... .::..: ::::..::. .:..:..:::::::: XP_011 SSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVW 240 250 260 270 280 290 390 400 410 420 430 440 pF1KB9 FCNRRQKEKRMT-PAAGAGHPPMDDVYAPGELGPGGGGASPPSAPPPPPPAALHHHHHHT ::::::::::.. :.: .:: :: ..:.:. .: :.:: : : XP_011 FCNRRQKEKRINCPVATPIKPP---VYNSRLVSPSGS-LGPLSVPPV----------HST 300 310 320 330 340 450 pF1KB9 LPGSVQ .::.: XP_011 MPGTVTSSCSPGNNSRPSSPGSGLHASSPTASQNNSKAAVNSASSFNSSGSWYRWNHSTY 350 360 370 380 390 400 >>XP_011541045 (OMIM: 607394) PREDICTED: POU domain, cla (403 aa) initn: 705 init1: 383 opt: 701 Z-score: 434.3 bits: 89.4 E(85289): 1.9e-17 Smith-Waterman score: 707; 49.1% identity (67.6% similar) in 275 aa overlap (184-450:109-346) 160 170 180 190 200 210 pF1KB9 QPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGH :::: : . :: . : ::: : : XP_011 LSQTQPGQQGLQPNLLPFPQQQSGLLLPQTGPGL--ASQAFGHPGLPGSSLEPHLEASQH 80 90 100 110 120 130 220 230 240 250 260 270 pF1KB9 AHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHSDEDAPSS-DDLEQFAKQFKQRRIKLGFT . :: :..::. : ::. ..::.::: ::::::::::: XP_011 L----------PVPKHL-PSSGGA----------DEPSDLEELEKFAKTFKQRRIKLGFT 140 150 160 170 280 290 300 310 320 pF1KB9 QADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEE-----TDSSSGSP :.:::::.: :::: :::::: :::::.:::::::::::::.:::.. .: : ..: XP_011 QGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPSDPSVSTP 180 190 200 210 220 230 330 340 350 360 370 380 pF1KB9 TNLDKIAAQ-GRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVW .. ... :::::::::::.... .::..: ::::..::. .:..:..:::::::: XP_011 SSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVW 240 250 260 270 280 290 390 400 410 420 430 440 pF1KB9 FCNRRQKEKRMT-PAAGAGHPPMDDVYAPGELGPGGGGASPPSAPPPPPPAALHHHHHHT ::::::::::.. :.: .:: :: ..:.:. .: :.:: : : XP_011 FCNRRQKEKRINCPVATPIKPP---VYNSRLVSPSGS-LGPLSVPPV----------HST 300 310 320 330 340 450 pF1KB9 LPGSVQ .::.: XP_011 MPGTVTSSCSPGNNSRPSSPGSGLHASSPTASQNNSKAAVNSASSFNSSGSWYRWNHSTY 350 360 370 380 390 400 >>XP_011541043 (OMIM: 607394) PREDICTED: POU domain, cla (403 aa) initn: 705 init1: 383 opt: 701 Z-score: 434.3 bits: 89.4 E(85289): 1.9e-17 Smith-Waterman score: 707; 49.1% identity (67.6% similar) in 275 aa overlap (184-450:109-346) 160 170 180 190 200 210 pF1KB9 QPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGH :::: : . :: . : ::: : : XP_011 LSQTQPGQQGLQPNLLPFPQQQSGLLLPQTGPGL--ASQAFGHPGLPGSSLEPHLEASQH 80 90 100 110 120 130 220 230 240 250 260 270 pF1KB9 AHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHSDEDAPSS-DDLEQFAKQFKQRRIKLGFT . :: :..::. : ::. ..::.::: ::::::::::: XP_011 L----------PVPKHL-PSSGGA----------DEPSDLEELEKFAKTFKQRRIKLGFT 140 150 160 170 280 290 300 310 320 pF1KB9 QADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEE-----TDSSSGSP :.:::::.: :::: :::::: :::::.:::::::::::::.:::.. .: : ..: XP_011 QGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPSDPSVSTP 180 190 200 210 220 230 330 340 350 360 370 380 pF1KB9 TNLDKIAAQ-GRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVW .. ... :::::::::::.... .::..: ::::..::. .:..:..:::::::: XP_011 SSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVW 240 250 260 270 280 290 390 400 410 420 430 440 pF1KB9 FCNRRQKEKRMT-PAAGAGHPPMDDVYAPGELGPGGGGASPPSAPPPPPPAALHHHHHHT ::::::::::.. :.: .:: :: ..:.:. .: :.:: : : XP_011 FCNRRQKEKRINCPVATPIKPP---VYNSRLVSPSGS-LGPLSVPPV----------HST 300 310 320 330 340 450 pF1KB9 LPGSVQ .::.: XP_011 MPGTVTSSCSPGNNSRPSSPGSGLHASSPTASQNNSKAAVNSASSFNSSGSWYRWNHSTY 350 360 370 380 390 400 >>XP_011541041 (OMIM: 607394) PREDICTED: POU domain, cla (432 aa) initn: 705 init1: 383 opt: 701 Z-score: 433.9 bits: 89.4 E(85289): 2e-17 Smith-Waterman score: 707; 49.1% identity (67.6% similar) in 275 aa overlap (184-450:138-375) 160 170 180 190 200 210 pF1KB9 QPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGH :::: : . :: . : ::: : : XP_011 LSQTQPGQQGLQPNLLPFPQQQSGLLLPQTGPGL--ASQAFGHPGLPGSSLEPHLEASQH 110 120 130 140 150 160 220 230 240 250 260 270 pF1KB9 AHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHSDEDAPSS-DDLEQFAKQFKQRRIKLGFT . :: :..::. : ::. ..::.::: ::::::::::: XP_011 L----------PVPKHL-PSSGGA----------DEPSDLEELEKFAKTFKQRRIKLGFT 170 180 190 200 280 290 300 310 320 pF1KB9 QADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEE-----TDSSSGSP :.:::::.: :::: :::::: :::::.:::::::::::::.:::.. .: : ..: XP_011 QGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPSDPSVSTP 210 220 230 240 250 260 330 340 350 360 370 380 pF1KB9 TNLDKIAAQ-GRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVW .. ... :::::::::::.... .::..: ::::..::. .:..:..:::::::: XP_011 SSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVW 270 280 290 300 310 320 390 400 410 420 430 440 pF1KB9 FCNRRQKEKRMT-PAAGAGHPPMDDVYAPGELGPGGGGASPPSAPPPPPPAALHHHHHHT ::::::::::.. :.: .:: :: ..:.:. .: :.:: : : XP_011 FCNRRQKEKRINCPVATPIKPP---VYNSRLVSPSGS-LGPLSVPPV----------HST 330 340 350 360 370 450 pF1KB9 LPGSVQ .::.: XP_011 MPGTVTSSCSPGNNSRPSSPGSGLHASSPTASQNNSKAAVNSASSFNSSGSWYRWNHSTY 380 390 400 410 420 430 >>XP_011541042 (OMIM: 607394) PREDICTED: POU domain, cla (432 aa) initn: 705 init1: 383 opt: 701 Z-score: 433.9 bits: 89.4 E(85289): 2e-17 Smith-Waterman score: 707; 49.1% identity (67.6% similar) in 275 aa overlap (184-450:138-375) 160 170 180 190 200 210 pF1KB9 QPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGH :::: : . :: . : ::: : : XP_011 LSQTQPGQQGLQPNLLPFPQQQSGLLLPQTGPGL--ASQAFGHPGLPGSSLEPHLEASQH 110 120 130 140 150 160 220 230 240 250 260 270 pF1KB9 AHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHSDEDAPSS-DDLEQFAKQFKQRRIKLGFT . :: :..::. : ::. ..::.::: ::::::::::: XP_011 L----------PVPKHL-PSSGGA----------DEPSDLEELEKFAKTFKQRRIKLGFT 170 180 190 200 280 290 300 310 320 pF1KB9 QADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEE-----TDSSSGSP :.:::::.: :::: :::::: :::::.:::::::::::::.:::.. .: : ..: XP_011 QGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPSDPSVSTP 210 220 230 240 250 260 330 340 350 360 370 380 pF1KB9 TNLDKIAAQ-GRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVW .. ... :::::::::::.... .::..: ::::..::. .:..:..:::::::: XP_011 SSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVW 270 280 290 300 310 320 390 400 410 420 430 440 pF1KB9 FCNRRQKEKRMT-PAAGAGHPPMDDVYAPGELGPGGGGASPPSAPPPPPPAALHHHHHHT ::::::::::.. :.: .:: :: ..:.:. .: :.:: : : XP_011 FCNRRQKEKRINCPVATPIKPP---VYNSRLVSPSGS-LGPLSVPPV----------HST 330 340 350 360 370 450 pF1KB9 LPGSVQ .::.: XP_011 MPGTVTSSCSPGNNSRPSSPGSGLHASSPTASQNNSKAAVNSASSFNSSGSWYRWNHSTY 380 390 400 410 420 430 >>NP_055167 (OMIM: 607394) POU domain, class 2, transcri (436 aa) initn: 705 init1: 383 opt: 701 Z-score: 433.9 bits: 89.4 E(85289): 2e-17 Smith-Waterman score: 707; 49.1% identity (67.6% similar) in 275 aa overlap (184-450:142-379) 160 170 180 190 200 210 pF1KB9 QPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGH :::: : . :: . : ::: : : NP_055 LSQTQPGQQGLQPNLLPFPQQQSGLLLPQTGPGL--ASQAFGHPGLPGSSLEPHLEASQH 120 130 140 150 160 220 230 240 250 260 270 pF1KB9 AHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHSDEDAPSS-DDLEQFAKQFKQRRIKLGFT . :: :..::. : ::. ..::.::: ::::::::::: NP_055 L----------PVPKHL-PSSGGA----------DEPSDLEELEKFAKTFKQRRIKLGFT 170 180 190 200 280 290 300 310 320 pF1KB9 QADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEE-----TDSSSGSP :.:::::.: :::: :::::: :::::.:::::::::::::.:::.. .: : ..: NP_055 QGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPSDPSVSTP 210 220 230 240 250 260 330 340 350 360 370 380 pF1KB9 TNLDKIAAQ-GRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVW .. ... :::::::::::.... .::..: ::::..::. .:..:..:::::::: NP_055 SSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVW 270 280 290 300 310 320 390 400 410 420 430 440 pF1KB9 FCNRRQKEKRMT-PAAGAGHPPMDDVYAPGELGPGGGGASPPSAPPPPPPAALHHHHHHT ::::::::::.. :.: .:: :: ..:.:. .: :.:: : : NP_055 FCNRRQKEKRINCPVATPIKPP---VYNSRLVSPSGS-LGPLSVPPV----------HST 330 340 350 360 370 450 pF1KB9 LPGSVQ .::.: NP_055 MPGTVTSSCSPGNNSRPSSPGSGLHASSPTASQNNSKAAVNSASSFNSSGSWYRWNHSTY 380 390 400 410 420 430 451 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 17:02:58 2016 done: Mon Nov 7 17:02:59 2016 Total Scan time: 10.230 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]