LDB1 ORF clone FXC02808

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Flexi ORF Clone FXC02808

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Clone info.

Species

human

Clone Name

pF1KB7630 Sequence (with vector) Restriction Map

Product ID

FXC02808

HaloTag Clone PID

FHC02808

ORF Sequence

DNA sequence (1125 bp)
Protein sequence (375 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527475]

Gene

KIBB7630

Symbol

LDB1

Alias : CLIM-2, CLIM2, LDB-1, NLI

Description

LIM domain binding 1, transcript variant 3

Original Clone ID

cs00130

Features of the cloned ORF sequence

Description

Length: 1125 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 375 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS7528.1 6.2e-148 100.0 LDB1 CCDS44472.1 6.7e-148 100.0 LDB1 CCDS3420.1 7.4e-112 77.1 LDB2 CCDS77903.1 3.9e-110 76.6 LDB2 CCDS47031.1 1.9e-85 71.8 LDB2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR002691 2 375 PF01803 LIM binding protein
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003884 375 603451 100.0 100.0 NP_001106878 411 603451 100.0 100.0 NP_001308541 409 603451 99.5 100.0 NP_001281 373 603450 77.1 97.6 XP_005248254 372 603450 76.8 97.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7630 Download

>KIBB7630  1125 bp
ATGCTGGATAGGGATGTGGGCCCAACTCCCATGTATCCGCCTACATACCTGGAGCCAGGG
ATTGGGAGGCACACACCATATGGCAACCAAACTGACTACAGAATATTTGAGCTTAACAAA
CGGCTTCAGAACTGGACAGAGGAGTGTGACAATCTCTGGTGGGATGCATTCACGACTGAG
TTCTTTGAGGATGATGCCATGTTGACCATCACTTTCTGCCTGGAGGATGGACCAAAGAGA
TATACCATTGGCCGGACCCTGATCCCACGCTACTTCCGCAGCATCTTTGAGGGGGGTGCT
ACGGAGCTGTACTATGTTCTTAAGCACCCCAAGGAGGCATTCCACAGCAACTTTGTGTCC
CTCGACTGTGACCAGGGCAGCATGGTGACCCAGCATGGCAAGCCCATGTTCACCCAGGTG
TGTGTGGAGGGCCGGTTGTACCTGGAGTTCATGTTTGACGACATGATGCGGATAAAGACG
TGGCACTTCAGCATCCGGCAGCACCGAGAGCTCATCCCCCGCAGCATCCTTGCCATGCAT
GCCCAAGACCCCCAGATGTTGGATCAGCTCTCCAAAAACATCACTCGGTGTGGGCTGTCC
AATTCCACTCTCAACTACCTCCGACTCTGTGTGATACTCGAGCCCATGCAAGAGCTCATG
TCACGCCACAAGACCTACAGCCTCAGCCCCCGCGACTGCCTCAAGACCTGCCTTTTCCAG
AAGTGGCAGCGCATGGTAGCACCCCCTGCGGAGCCCACACGTCAGCAGCCCAGCAAACGG
CGGAAACGGAAGATGTCAGGGGGCAGCACCATGAGCTCTGGTGGTGGCAACACCAACAAC
AGCAACAGCAAGAAGAAGAGCCCAGCTAGCACCTTCGCCCTCTCCAGCCAGGTACCTGAT
GTGATGGTGGTGGGGGAGCCCACCCTGATGGGCGGGGAGTTCGGGGACGAGGACGAGAGG
CTCATCACCCGGCTGGAGAACACCCAGTTTGACGCAGCCAACGGCATTGACGACGAGGAC
AGCTTTAACAACTCCCCTGCACTGGGCGCTAACAGCCCCTGGAACAGCAAGCCTCCGTCC
AGCCAAGAAAGCAAATCGGAGAACCCCACGTCACAGGCCTCCCAG

ORF Protein

Cloned ORF protein sequence for pF1KB7630 Download

>KIBB7630  375 aa
MLDRDVGPTPMYPPTYLEPGIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTE
FFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVS
LDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMH
AQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQ
KWQRMVAPPAEPTRQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPD
VMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSPALGANSPWNSKPPS
SQESKSENPTSQASQ

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7630 Download

>pF1KB7630  4238 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCTGGATAGG
GATGTGGGCCCAACTCCCATGTATCCGCCTACATACCTGGAGCCAGGGATTGGGAGGCAC
ACACCATATGGCAACCAAACTGACTACAGAATATTTGAGCTTAACAAACGGCTTCAGAAC
TGGACAGAGGAGTGTGACAATCTCTGGTGGGATGCATTCACGACTGAGTTCTTTGAGGAT
GATGCCATGTTGACCATCACTTTCTGCCTGGAGGATGGACCAAAGAGATATACCATTGGC
CGGACCCTGATCCCACGCTACTTCCGCAGCATCTTTGAGGGGGGTGCTACGGAGCTGTAC
TATGTTCTTAAGCACCCCAAGGAGGCATTCCACAGCAACTTTGTGTCCCTCGACTGTGAC
CAGGGCAGCATGGTGACCCAGCATGGCAAGCCCATGTTCACCCAGGTGTGTGTGGAGGGC
CGGTTGTACCTGGAGTTCATGTTTGACGACATGATGCGGATAAAGACGTGGCACTTCAGC
ATCCGGCAGCACCGAGAGCTCATCCCCCGCAGCATCCTTGCCATGCATGCCCAAGACCCC
CAGATGTTGGATCAGCTCTCCAAAAACATCACTCGGTGTGGGCTGTCCAATTCCACTCTC
AACTACCTCCGACTCTGTGTGATACTCGAGCCCATGCAAGAGCTCATGTCACGCCACAAG
ACCTACAGCCTCAGCCCCCGCGACTGCCTCAAGACCTGCCTTTTCCAGAAGTGGCAGCGC
ATGGTAGCACCCCCTGCGGAGCCCACACGTCAGCAGCCCAGCAAACGGCGGAAACGGAAG
ATGTCAGGGGGCAGCACCATGAGCTCTGGTGGTGGCAACACCAACAACAGCAACAGCAAG
AAGAAGAGCCCAGCTAGCACCTTCGCCCTCTCCAGCCAGGTACCTGATGTGATGGTGGTG
GGGGAGCCCACCCTGATGGGCGGGGAGTTCGGGGACGAGGACGAGAGGCTCATCACCCGG
CTGGAGAACACCCAGTTTGACGCAGCCAACGGCATTGACGACGAGGACAGCTTTAACAAC
TCCCCTGCACTGGGCGCTAACAGCCCCTGGAACAGCAAGCCTCCGTCCAGCCAAGAAAGC
AAATCGGAGAACCCCACGTCACAGGCCTCCCAGGTTTAAACGAATTCGAGCTCGGTACCC
GGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCG
AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGC
CTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGC
TGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTT
TCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGG
TCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCG
CCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGT
AAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGG
CGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAA
GATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGG
GCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGC
CCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCA
GCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTC
ACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCA
TCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCAT
ACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCA
CGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGG
CTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTC
GTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCT
GGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCT
ACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTAC
GGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTC
TGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCA
CTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTG
AGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCA
TAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAA
CCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCC
TGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGC
GCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCT
GGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCG
TCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAG
GATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTA
CGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGG
AAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTT
TGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTT
TTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAG
ATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGC
TGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGT
GGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCA
GGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTG
ATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTAC
TGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGT
AGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT
AAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTC
AGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAA
CTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCT
GTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACG
TTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATC
AAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT