Gene/Protein Characteristic Table for KIAA0613
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Product ID ORK00575
Accession No AB014513
Description LIM domain binding 3, transcript variant 1
Clone name hg01088b
Vector information
The cDNA fragment was inserted at the NotI site of the
cDNA sequence DNA sequence (4223 bp)
Predicted protein sequence (734 aa)
Flexi ORF Clone FXC00575
Source Human adult brain
Rouge ID mKIAA0613 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 4223 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Features of the protein sequence

Length: 734 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
O75112 2.2e-183 100.0 LIM domain-bind...
Homo sapiens
XP_001085158 2e-178 97.5 similar to LIM ...
Macaca mulatta
AAD42950 3.3e-162 88.7 PDZ-LIM protein...
Mus musculus
Q9JKS4 4.3e-162 88.6 LIM domain-bind...
Mus musculus
BAG65515 3.6e-150 83.5 unnamed protein...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom IPR001781 556 610 PD000094 Zinc finger
IPR001781 615 671 PD000094 Zinc finger
IPR001781 674 728 PD000094 Zinc finger
HMMPfam IPR001478 11 88 PF00595 PDZ/DHR/GLGF
IPR001781 558 614 PF00412 Zinc finger
IPR001781 617 673 PF00412 Zinc finger
IPR001781 676 733 PF00412 Zinc finger
HMMSmart IPR001478 18 91 SM00228 PDZ/DHR/GLGF
IPR006643 196 221 SM00735 ZASP
IPR001781 557 608 SM00132 Zinc finger
IPR001781 616 667 SM00132 Zinc finger
IPR001781 675 728 SM00132 Zinc finger
ProfileScan IPR001478 9 91 PS50106 PDZ/DHR/GLGF
IPR001781 556 614 PS50023 Zinc finger
IPR001781 615 674 PS50023 Zinc finger
IPR001781 675 734 PS50023 Zinc finger
ScanRegExp IPR001781 617 650 PS00478 Zinc finger
IPR001781 676 711 PS00478 Zinc finger
Expression profile

Experimental conditions
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information

Chromosome No. 10
Experimental conditions
Panel name GeneBridge 4
PCR product length 165 bp
PCR conditions 95 °C15 sec64 °C60 sec30 cycles
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