# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hg01088b.fasta.nr -Q ../query/KIAA0613.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0613, 734 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7785833 sequences Expectation_n fit: rho(ln(x))= 7.2458+/-0.000222; mu= 4.4135+/- 0.012 mean_var=212.8879+/-40.581, 0's: 27 Z-trim: 145 B-trim: 270 in 1/64 Lambda= 0.087902 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|83288256|sp|O75112.2|LDB3_HUMAN RecName: Full=L ( 727) 5011 648.7 2.2e-183 gi|109089097|ref|XP_001085158.1| PREDICTED: simila ( 725) 4881 632.2 2e-178 gi|11612596|gb|AAD42950.2|AF114378_1 PDZ-LIM prote ( 723) 4456 578.3 3.3e-162 gi|81906753|sp|Q9JKS4.1|LDB3_MOUSE RecName: Full=L ( 723) 4453 578.0 4.3e-162 gi|194388262|dbj|BAG65515.1| unnamed protein produ ( 732) 4141 538.4 3.6e-150 gi|28144145|gb|AAO26189.1| PDZ-LIM protein cypher1 ( 679) 3284 429.7 1.8e-117 gi|84872215|ref|NP_001034163.1| LIM domain binding ( 684) 3284 429.7 1.8e-117 gi|84875544|ref|NP_001034161.1| LIM domain binding ( 679) 3281 429.3 2.3e-117 gi|73953183|ref|XP_865054.1| PREDICTED: similar to ( 690) 3155 413.3 1.5e-112 gi|126272210|ref|XP_001363519.1| PREDICTED: simila ( 740) 2944 386.6 1.8e-104 gi|119600729|gb|EAW80323.1| LIM domain binding 3, ( 490) 2939 385.7 2.1e-104 gi|73953161|ref|XP_864848.1| PREDICTED: similar to ( 674) 2913 382.6 2.6e-103 gi|119600734|gb|EAW80328.1| LIM domain binding 3, ( 476) 2881 378.4 3.4e-102 gi|122056614|ref|NP_001073583.1| LIM domain bindin ( 617) 2651 349.3 2.4e-93 gi|5441369|emb|CAB46728.1| ZASP protein [Homo sapi ( 617) 2610 344.1 8.9e-92 gi|5441371|emb|CAB46729.1| ZASP protein [Homo sapi ( 470) 2601 342.9 1.7e-91 gi|109089095|ref|XP_001085274.1| PREDICTED: simila ( 625) 2588 341.4 6.2e-91 gi|28144143|gb|AAO26188.1| PDZ-LIM protein cypher3 ( 661) 2575 339.7 2e-90 gi|109089099|ref|XP_001084921.1| PREDICTED: simila ( 478) 2571 339.1 2.3e-90 gi|6969631|gb|AAF33848.1| oracle 2 protein [Mus mu ( 661) 2572 339.4 2.6e-90 gi|194206187|ref|XP_001916995.1| PREDICTED: simila ( 687) 2535 334.7 7e-89 gi|28144147|gb|AAO26190.1| PDZ-LIM protein cypher3 ( 622) 2518 332.5 2.9e-88 gi|73953181|ref|XP_852115.1| PREDICTED: similar to ( 621) 2201 292.3 3.7e-76 gi|73953185|ref|XP_536411.2| PREDICTED: similar to ( 632) 2198 291.9 4.9e-76 gi|194378210|dbj|BAG57855.1| unnamed protein produ ( 648) 2173 288.8 4.4e-75 gi|194042262|ref|XP_001925986.1| PREDICTED: simila ( 675) 2172 288.6 5e-75 gi|119600733|gb|EAW80327.1| LIM domain binding 3, ( 667) 2157 286.7 1.8e-74 gi|126272208|ref|XP_001363449.1| PREDICTED: simila ( 679) 2146 285.4 4.9e-74 gi|126272206|ref|XP_001363364.1| PREDICTED: simila ( 622) 2141 284.7 7.2e-74 gi|126272204|ref|XP_001363282.1| PREDICTED: simila ( 627) 2139 284.4 8.6e-74 gi|194042260|ref|XP_001925900.1| PREDICTED: simila ( 607) 2098 279.2 3.1e-72 gi|73953177|ref|XP_865000.1| PREDICTED: similar to ( 463) 2013 268.3 4.6e-69 gi|33339649|gb|AAQ14316.1|AF276807_1 Z-band altern ( 330) 1968 262.4 1.9e-67 gi|149635747|ref|XP_001509123.1| PREDICTED: simila ( 391) 1940 258.9 2.5e-66 gi|73587220|gb|AAI03440.1| LIM domain binding 3 [B ( 330) 1685 226.5 1.2e-56 gi|148692936|gb|EDL24883.1| LIM domain binding 3, ( 332) 1664 223.9 7.8e-56 gi|28144141|gb|AAO26187.1| PDZ-LIM protein cypher2 ( 327) 1648 221.8 3.2e-55 gi|194388458|dbj|BAG60197.1| unnamed protein produ ( 271) 1576 212.6 1.6e-52 gi|33339653|gb|AAQ14318.1|AF276809_1 Z-band altern ( 398) 1532 207.2 9.6e-51 gi|33339651|gb|AAQ14317.1|AF276808_1 Z-band altern ( 231) 1528 206.4 9.7e-51 gi|63030041|gb|AAY27884.1| cypher/ZASP splice vari ( 643) 1520 205.9 3.7e-50 gi|63030043|gb|AAY27885.1| cypher/ZASP splice vari ( 596) 1515 205.3 5.5e-50 gi|63030059|gb|AAY27893.1| cypher/ZASP splice vari ( 498) 1511 204.7 7e-50 gi|63030039|gb|AAY27883.1| cypher/ZASP splice vari ( 649) 1510 204.7 9.1e-50 gi|63030051|gb|AAY27889.1| cypher/ZASP splice vari ( 582) 1502 203.6 1.7e-49 gi|63030053|gb|AAY27890.1| cypher/ZASP splice vari ( 580) 1494 202.6 3.4e-49 gi|119600730|gb|EAW80324.1| LIM domain binding 3, ( 443) 1462 198.4 4.8e-48 gi|109075015|ref|XP_001103137.1| PREDICTED: simila ( 625) 1241 170.5 1.6e-39 gi|117645612|emb|CAL38272.1| hypothetical protein ( 625) 1240 170.4 1.8e-39 gi|114595210|ref|XP_001164521.1| PREDICTED: simila ( 625) 1234 169.7 3e-39 >>gi|83288256|sp|O75112.2|LDB3_HUMAN RecName: Full=LIM d (727 aa) initn: 5011 init1: 5011 opt: 5011 Z-score: 3448.6 bits: 648.7 E(): 2.2e-183 Smith-Waterman score: 5011; 100.000% identity (100.000% similar) in 727 aa overlap (8-734:1-727) 10 20 30 40 50 60 KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|832 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID 10 20 30 40 50 70 80 90 100 110 120 KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|832 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|832 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|832 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|832 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA06 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|832 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP 300 310 320 330 340 350 370 380 390 400 410 420 KIAA06 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|832 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA 360 370 380 390 400 410 430 440 450 460 470 480 KIAA06 STYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|832 STYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP 420 430 440 450 460 470 490 500 510 520 530 540 KIAA06 SVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|832 SVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR 480 490 500 510 520 530 550 560 570 580 590 600 KIAA06 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|832 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ 540 550 560 570 580 590 610 620 630 640 650 660 KIAA06 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|832 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG 600 610 620 630 640 650 670 680 690 700 710 720 KIAA06 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|832 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK 660 670 680 690 700 710 730 KIAA06 DRPLCKKHAHTINL :::::::::::::: gi|832 DRPLCKKHAHTINL 720 >>gi|109089097|ref|XP_001085158.1| PREDICTED: similar to (725 aa) initn: 3496 init1: 2906 opt: 4881 Z-score: 3359.6 bits: 632.2 E(): 2e-178 Smith-Waterman score: 4881; 97.524% identity (99.037% similar) in 727 aa overlap (8-734:1-725) 10 20 30 40 50 60 KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID 10 20 30 40 50 70 80 90 100 110 120 KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS :::::::::::::::::::::::::::::::::: ::::::::::: :::::. :::::: gi|109 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSPPSAFSSLAEASAPGPPRVRLRAKTS 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PDGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|109 IKDLAVDSASPVYQAVIKNQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA06 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP :::::::::::::::::::::::::::::: :::::::::::::::::::::.::..::: gi|109 ALRRSSTPIEHAPVCTSQATTPLLPASAQPSAAASPSAASPPLATAAAHTAITSAAATAP 300 310 320 330 340 350 370 380 390 400 410 420 KIAA06 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|109 ASSPADSPRPQASSYSPATAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA 360 370 380 390 400 410 430 440 450 460 470 480 KIAA06 STYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP ::::::::::::::::::::.::::::::::::::: ::::::: :::::::::::::: gi|109 STYSPSPGANYSPTPYTPSPTPAYTPSPAPAYTPSP--TYTPSPALAYTPSPAPNYNPAP 420 430 440 450 460 470 490 500 510 520 530 540 KIAA06 SVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SAAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR 480 490 500 510 520 530 550 560 570 580 590 600 KIAA06 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ ::::::::::::::::::::::::::::::::::::::::::.:::::.::::::::::: gi|109 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKSSLADVCFVEEQ 540 550 560 570 580 590 610 620 630 640 650 660 KIAA06 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG 600 610 620 630 640 650 670 680 690 700 710 720 KIAA06 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK 660 670 680 690 700 710 730 KIAA06 DRPLCKKHAHTINL :::::::::::::: gi|109 DRPLCKKHAHTINL 720 >>gi|11612596|gb|AAD42950.2|AF114378_1 PDZ-LIM protein c (723 aa) initn: 4591 init1: 2604 opt: 4456 Z-score: 3068.3 bits: 578.3 E(): 3.3e-162 Smith-Waterman score: 4456; 88.721% identity (95.598% similar) in 727 aa overlap (8-734:1-723) 10 20 30 40 50 60 KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID 10 20 30 40 50 70 80 90 100 110 120 KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT ::::::::::::::::::::::::::::::::::::::::::.:.::::::::::::::: gi|116 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPIQSPLPVIPHQKDPALDT 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS ::::..::::::::::::. :. ::: .::. :. : : ::: : : .: ::.: gi|116 NGSLATPSPSPEARASPGA---LEFGDTFSSSFSQTSVCSPLMEASGPVLPLGSPVAKAS 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP :::. ..::.::: :::::::::::::::::::::::::::::::::::.:: ::::: gi|116 SEGAQGSVSPKVLPGPSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGAGLLGGSLP 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE .:::::::::::::::::.:.:::::::::::::::::::::::::::::::.::::::: gi|116 VKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA06 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP ::::::::::::::::::::.:::::::: :::::: :::: :::::: : :.::...: gi|116 ALRRSSTPIEHAPVCTSQATSPLLPASAQSPAAASPIAASPTLATAAA-THAAAASAAGP 300 310 320 330 340 370 380 390 400 410 420 KIAA06 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA :.::...::::::.::::.::: ::..::::::::::::::::::::::::::::::::: gi|116 AASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA 350 360 370 380 390 400 430 440 450 460 470 480 KIAA06 STYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP :.::::::::::::::::::::::::::::.:::::.:::::::::::::::::::.:.: gi|116 SSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTYTPSPAPAYTPSPAPNYTPTP 410 420 430 440 450 460 490 500 510 520 530 540 KIAA06 SVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR :.::::::.: :::::::::::::::::::::::..::::::::.:::.:.:::: :::: gi|116 SAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQTLPRGAPAYNPTGPQVTPLAR 470 480 490 500 510 520 550 560 570 580 590 600 KIAA06 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ :: :::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|116 GTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQ 530 540 550 560 570 580 610 620 630 640 650 660 KIAA06 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|116 NNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG 590 600 610 620 630 640 670 680 690 700 710 720 KIAA06 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK 650 660 670 680 690 700 730 KIAA06 DRPLCKKHAHTINL :.::::::::.::. gi|116 DKPLCKKHAHAINV 710 720 >>gi|81906753|sp|Q9JKS4.1|LDB3_MOUSE RecName: Full=LIM d (723 aa) initn: 4583 init1: 2601 opt: 4453 Z-score: 3066.2 bits: 578.0 E(): 4.3e-162 Smith-Waterman score: 4453; 88.583% identity (95.598% similar) in 727 aa overlap (8-734:1-723) 10 20 30 40 50 60 KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID 10 20 30 40 50 70 80 90 100 110 120 KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT ::::::::::::::::::::::::::::::::::::::::::.:.::::::::::::::: gi|819 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPIQSPLPVIPHQKDPALDT 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS ::::..::::::::::::. :. ::: .::. :. : : ::: : : .: ::.: gi|819 NGSLATPSPSPEARASPGA---LEFGDTFSSSFSQTSVCSPLMEASGPVLPLGSPVAKAS 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP :::. ..::.::: :::::::::::::::::::::::::::::::::::.:: ::::: gi|819 SEGAQGSVSPKVLPGPSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGAGLLGGSLP 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE .:::::::::::::::::.:.:::::::::::::::::::::::::::::::.::::::: gi|819 VKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA06 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP ::::::::::::::::::::.:::::::: :::::: :::: :::::: : :.::...: gi|819 ALRRSSTPIEHAPVCTSQATSPLLPASAQSPAAASPIAASPTLATAAA-THAAAASAAGP 300 310 320 330 340 370 380 390 400 410 420 KIAA06 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA :.::...::::::.::::.::: ::..::::::::::::::::::::::::::::::::: gi|819 AASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA 350 360 370 380 390 400 430 440 450 460 470 480 KIAA06 STYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP :.::::::::::::::::::::::::::::.:::::.:::.:::::::::::::::.:.: gi|819 SSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYTPTP 410 420 430 440 450 460 490 500 510 520 530 540 KIAA06 SVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR :.::::::.: :::::::::::::::::::::::..::::::::.:::.:.:::: :::: gi|819 SAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQTLPRGAPAYNPTGPQVTPLAR 470 480 490 500 510 520 550 560 570 580 590 600 KIAA06 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ :: :::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|819 GTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQ 530 540 550 560 570 580 610 620 630 640 650 660 KIAA06 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|819 NNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG 590 600 610 620 630 640 670 680 690 700 710 720 KIAA06 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK 650 660 670 680 690 700 730 KIAA06 DRPLCKKHAHTINL :.::::::::.::. gi|819 DKPLCKKHAHAINV 710 720 >>gi|194388262|dbj|BAG65515.1| unnamed protein product [ (732 aa) initn: 4158 init1: 2643 opt: 4141 Z-score: 2852.3 bits: 538.4 E(): 3.6e-150 Smith-Waterman score: 4328; 83.522% identity (83.522% similar) in 795 aa overlap (8-734:1-732) 10 20 30 40 50 60 KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID 10 20 30 40 50 70 80 90 100 110 120 KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS 120 130 140 150 160 170 190 200 210 220 230 KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGG--- ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGADY 180 190 200 210 220 230 KIAA06 ------------------------------------------------------------ gi|194 QERFNPSALKDSALSTHKPIEVKGLGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQG 240 250 260 270 280 290 240 250 260 270 280 290 KIAA06 -----SLPIKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTE ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SDFSGSLPIKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTE 300 310 320 330 340 350 300 310 320 330 340 350 KIAA06 FMQDPDEEALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAI ::::::::::::: gi|194 FMQDPDEEALRRS----------------------------------------------- 360 360 370 380 390 400 410 KIAA06 ASASTTAPASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRP :::::::::::::::::::::::::::::::::::::::::::: gi|194 ----------------RPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRP 370 380 390 400 410 420 430 440 450 460 470 KIAA06 SVYQPVPASTYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SVYQPVPASTYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSP 420 430 440 450 460 470 480 490 500 510 520 530 KIAA06 APNYNPAPSVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 APNYNPAPSVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAG 480 490 500 510 520 530 540 550 560 570 580 590 KIAA06 PQVPPLARGTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PQVPPLARGTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLA 540 550 560 570 580 590 600 610 620 630 640 650 KIAA06 DVCFVEEQNNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DVCFVEEQNNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGN 600 610 620 630 640 650 660 670 680 690 700 710 KIAA06 SLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLE 660 670 680 690 700 710 720 730 KIAA06 GQPFYSKKDRPLCKKHAHTINL :::::::::::::::::::::: gi|194 GQPFYSKKDRPLCKKHAHTINL 720 730 >>gi|28144145|gb|AAO26189.1| PDZ-LIM protein cypher1s [M (679 aa) initn: 4875 init1: 2604 opt: 3284 Z-score: 2265.3 bits: 429.7 E(): 1.8e-117 Smith-Waterman score: 3928; 80.193% identity (88.583% similar) in 727 aa overlap (8-734:1-679) 10 20 30 40 50 60 KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|281 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID 10 20 30 40 50 70 80 90 100 110 120 KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT ::::::::::::::::::::::::::::::::::::::::::.:.::::::::: gi|281 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPIQSPLPVIPHQK------ 60 70 80 90 100 130 140 150 160 170 180 KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS .:: ::. . . . :.:. . ::.:. : gi|281 ---VVANSPA-----------NADYQERFNPSVLKDSALSTHKPIEVKG----------- 110 120 130 140 190 200 210 220 230 240 KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP :: :: . :::.::..:: ... : .. ...:.: . .:::: gi|281 -------LGGKA---TIIHAQYNTPISMYSQDAI-----MDAIAGQAQAQGSDF-SGSLP 150 160 170 180 250 260 270 280 290 300 KIAA06 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE .:::::::::::::::::.:.:::::::::::::::::::::::::::::::.::::::: gi|281 VKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEE 190 200 210 220 230 240 310 320 330 340 350 360 KIAA06 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP ::::::::::::::::::::.:::::::: :::::: :::: :::::: : :.::...: gi|281 ALRRSSTPIEHAPVCTSQATSPLLPASAQSPAAASPIAASPTLATAAA-THAAAASAAGP 250 260 270 280 290 300 370 380 390 400 410 420 KIAA06 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA :.::...::::::.::::.::: ::..::::::::::::::::::::::::::::::::: gi|281 AASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA 310 320 330 340 350 360 430 440 450 460 470 480 KIAA06 STYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP :.::::::::::::::::::::::::::::.:::::.:::::::::::::::::::.:.: gi|281 SSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTYTPSPAPAYTPSPAPNYTPTP 370 380 390 400 410 420 490 500 510 520 530 540 KIAA06 SVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR :.::::::.: :::::::::::::::::::::::..::::::::.:::.:.:::: :::: gi|281 SAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQTLPRGAPAYNPTGPQVTPLAR 430 440 450 460 470 480 550 560 570 580 590 600 KIAA06 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ :: :::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|281 GTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQ 490 500 510 520 530 540 610 620 630 640 650 660 KIAA06 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|281 NNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG 550 560 570 580 590 600 670 680 690 700 710 720 KIAA06 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|281 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK 610 620 630 640 650 660 730 KIAA06 DRPLCKKHAHTINL :.::::::::.::. gi|281 DKPLCKKHAHAINV 670 >>gi|84872215|ref|NP_001034163.1| LIM domain binding 3 i (684 aa) initn: 4865 init1: 2601 opt: 3284 Z-score: 2265.3 bits: 429.7 E(): 1.8e-117 Smith-Waterman score: 3926; 80.055% identity (88.446% similar) in 727 aa overlap (8-734:1-684) 10 20 30 40 50 60 KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID 10 20 30 40 50 70 80 90 100 110 120 KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT ::::::::::::::::::::::::::::::::::::::::::.:.::::::::: gi|848 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPIQSPLPVIPHQK------ 60 70 80 90 100 130 140 150 160 170 180 KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS .:: ::. . . . :.:. . ::.:. : gi|848 ---VVANSPA-----------NADYQERFNPSVLKDSALSTHKPIEVKG----------- 110 120 130 140 190 200 210 220 230 240 KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP :: :: . :::.::..:: ... . : : . .:. . . : .::: gi|848 -------LGGKA---TIIHAQYNTPISMYSQDAIMD-AIAGQAQAQGSDFSGASPLASLP 150 160 170 180 190 250 260 270 280 290 300 KIAA06 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE .:::::::::::::::::.:.:::::::::::::::::::::::::::::::.::::::: gi|848 VKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEE 200 210 220 230 240 250 310 320 330 340 350 360 KIAA06 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP ::::::::::::::::::::.:::::::: :::::: :::: :::::: : :.::...: gi|848 ALRRSSTPIEHAPVCTSQATSPLLPASAQSPAAASPIAASPTLATAAA-THAAAASAAGP 260 270 280 290 300 310 370 380 390 400 410 420 KIAA06 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA :.::...::::::.::::.::: ::..::::::::::::::::::::::::::::::::: gi|848 AASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA 320 330 340 350 360 370 430 440 450 460 470 480 KIAA06 STYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP :.::::::::::::::::::::::::::::.:::::.:::.:::::::::::::::.:.: gi|848 SSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYTPTP 380 390 400 410 420 430 490 500 510 520 530 540 KIAA06 SVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR :.::::::.: :::::::::::::::::::::::..::::::::.:::.:.:::: :::: gi|848 SAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQTLPRGAPAYNPTGPQVTPLAR 440 450 460 470 480 490 550 560 570 580 590 600 KIAA06 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ :: :::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|848 GTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQ 500 510 520 530 540 550 610 620 630 640 650 660 KIAA06 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|848 NNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG 560 570 580 590 600 610 670 680 690 700 710 720 KIAA06 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK 620 630 640 650 660 670 730 KIAA06 DRPLCKKHAHTINL :.::::::::.::. gi|848 DKPLCKKHAHAINV 680 >>gi|84875544|ref|NP_001034161.1| LIM domain binding 3 i (679 aa) initn: 4867 init1: 2601 opt: 3281 Z-score: 2263.3 bits: 429.3 E(): 2.3e-117 Smith-Waterman score: 3925; 80.055% identity (88.583% similar) in 727 aa overlap (8-734:1-679) 10 20 30 40 50 60 KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID 10 20 30 40 50 70 80 90 100 110 120 KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT ::::::::::::::::::::::::::::::::::::::::::.:.::::::::: gi|848 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPIQSPLPVIPHQK------ 60 70 80 90 100 130 140 150 160 170 180 KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS .:: ::. . . . :.:. . ::.:. : gi|848 ---VVANSPA-----------NADYQERFNPSVLKDSALSTHKPIEVKG----------- 110 120 130 140 190 200 210 220 230 240 KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP :: :: . :::.::..:: ... : .. ...:.: . .:::: gi|848 -------LGGKA---TIIHAQYNTPISMYSQDAI-----MDAIAGQAQAQGSDF-SGSLP 150 160 170 180 250 260 270 280 290 300 KIAA06 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE .:::::::::::::::::.:.:::::::::::::::::::::::::::::::.::::::: gi|848 VKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEE 190 200 210 220 230 240 310 320 330 340 350 360 KIAA06 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP ::::::::::::::::::::.:::::::: :::::: :::: :::::: : :.::...: gi|848 ALRRSSTPIEHAPVCTSQATSPLLPASAQSPAAASPIAASPTLATAAA-THAAAASAAGP 250 260 270 280 290 300 370 380 390 400 410 420 KIAA06 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA :.::...::::::.::::.::: ::..::::::::::::::::::::::::::::::::: gi|848 AASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA 310 320 330 340 350 360 430 440 450 460 470 480 KIAA06 STYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP :.::::::::::::::::::::::::::::.:::::.:::.:::::::::::::::.:.: gi|848 SSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYTPTP 370 380 390 400 410 420 490 500 510 520 530 540 KIAA06 SVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR :.::::::.: :::::::::::::::::::::::..::::::::.:::.:.:::: :::: gi|848 SAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQTLPRGAPAYNPTGPQVTPLAR 430 440 450 460 470 480 550 560 570 580 590 600 KIAA06 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ :: :::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|848 GTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQ 490 500 510 520 530 540 610 620 630 640 650 660 KIAA06 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|848 NNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG 550 560 570 580 590 600 670 680 690 700 710 720 KIAA06 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK 610 620 630 640 650 660 730 KIAA06 DRPLCKKHAHTINL :.::::::::.::. gi|848 DKPLCKKHAHAINV 670 >>gi|73953183|ref|XP_865054.1| PREDICTED: similar to LIM (690 aa) initn: 3461 init1: 2091 opt: 3155 Z-score: 2176.9 bits: 413.3 E(): 1.5e-112 Smith-Waterman score: 3907; 79.726% identity (88.082% similar) in 730 aa overlap (8-734:1-690) 10 20 30 40 50 60 KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID 10 20 30 40 50 70 80 90 100 110 120 KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT ::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: : gi|739 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQSPLPVIPHQKDPAGDM 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS .:: : :: ::: : ::: :. ::.::. .:::.. . gi|739 SGS-------PTAR-SPGPLGPPELGPSSSPSFSQ-------------SPPRGG----PG 120 130 140 190 200 210 220 230 240 KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP ::: ::. :...: :::::::::::::::::::.:.::: ::: :.:::::::: gi|739 TEGAP---GPR---GQGRPAQYNNPIGLYSAETLREMAQVYRMSLGGKAWGAGLPGGSLP 150 160 170 180 190 200 250 260 270 280 290 300 KIAA06 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE ::::::::::::::::::.:::::::::::::::::::::::::::::::::.::::::: gi|739 IKDLAVDSASPVYQAVIKNQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEE 210 220 230 240 250 260 310 320 330 340 350 360 KIAA06 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP :::::::: ::::::::::.::: :::::::::: :::::: ..::: .: :. : gi|739 ALRRSSTPTEHAPVCTSQAATPLPPASAQPPAAAPRSAASPPPSAAAACAAAAT-----P 270 280 290 300 310 370 380 390 400 410 420 KIAA06 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA :::::::::::::.:: : :.: :::.: :::. ::::::::::::::::::::::.:: gi|739 ASSPADSPRPQASAYSLAKATSPAPASHP-YSEASAAPAPKPRVVTTASIRPSVYQPAPA 320 330 340 350 360 370 430 440 450 460 470 KIAA06 STYSPSPGANYSPTPYTPSP-APAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPN--YN .. .: ::. :::. :. :... :: .:.::: :.:.:.: :::::::. :. gi|739 GSKAPRPGGLTPPTPHPPTHHPPTHSTVPAATYSPSPGPSYSPAP---YTPSPAPGPGYS 380 390 400 410 420 430 480 490 500 510 520 530 KIAA06 PAPSVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPP :.::.::.:::.: :::::::.:::::::::::::..: :.::::::.:.: : :::: : gi|739 PTPSAAYGGGPVESASRPPWVADDSFSQKFAPGKSSSSASRQTLPRGAPTYGPPGPQVSP 440 450 460 470 480 490 540 550 560 570 580 590 KIAA06 LARGTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFV :::: ::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|739 LARGIVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFV 500 510 520 530 540 550 600 610 620 630 640 650 KIAA06 EEQNNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHM :::.::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|739 EEQSNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHM 560 570 580 590 600 610 660 670 680 690 700 710 KIAA06 EDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFY :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EDGEPYCEKDYVNLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFY 620 630 640 650 660 670 720 730 KIAA06 SKKDRPLCKKHAHTINL ::::.::::::::.::. gi|739 SKKDKPLCKKHAHAINV 680 690 >>gi|126272210|ref|XP_001363519.1| PREDICTED: similar to (740 aa) initn: 3295 init1: 1481 opt: 2944 Z-score: 2031.9 bits: 386.6 E(): 1.8e-104 Smith-Waterman score: 3799; 74.967% identity (86.285% similar) in 751 aa overlap (8-734:1-740) 10 20 30 40 50 60 KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID :.:::::::::::::::::::::::::::::::::::::::::.::::::::: gi|126 MAYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLTQGDLVVAID 10 20 30 40 50 70 80 90 100 110 120 KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT ::::::::::::::::::::::::::::::::::::::.:: ...:.:::::::: : . gi|126 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTSAPRIESPMPVIPHQKDSASEM 60 70 80 90 100 110 130 140 150 160 KIAA06 NGSLVAPSPSPEARASPGTPGTP-----------ELRPTFSPAFSRPSAFSSLAEASDPG ::.:.: : : .. : ::: : ::: . :. . .:: .:.:. gi|126 NGNLTALSSIPSPKGEPPTPGMTNGTGVGTLSIQEASQTFSSS-SQATIISSHMVTSEPS 120 130 140 150 160 170 170 180 190 200 210 220 KIAA06 PPRASLRAKTSPEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKA :::.: :..::.. : :.::: ::.: :::::::::::::::::::.:::.: :::: gi|126 PPRGSQGLKANPEATADSLSPKAQVGSGQQRQYNNPIGLYSAETLREMAEMYQLSQRGKA 180 190 200 210 220 230 230 240 250 260 270 280 KIAA06 SGVGLPGGSLPIKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMT :.. : :..:.:::::::::::::::::.:::::::.:::::::::::::::::::::: gi|126 PGTAPPRGNIPVKDLAVDSASPVYQAVIKNQNKPEDEVDEWARRSSNLQSRSFRILAQMT 240 250 260 270 280 290 290 300 310 320 330 340 KIAA06 GTEFMQDPDEEALRRSSTPIEHAPVCTSQATTP---LLPASAQPPAAASPSAASPPLATA :::.::::::::::::: :. .: ...:: ..: . : . :: :: . gi|126 GTEYMQDPDEEALRRSSIREEQKSLCFMMVVTPYPMIIPERSLWPKLSPPSPPPPPPVCP 300 310 320 330 340 350 350 360 370 380 390 400 KIAA06 AAHTAIASASTTAPASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVT .. :.. .. ::: : .::::::..:: :: .:.:.::. :::::::: gi|126 GSFTSLRASLLTAPLFF-----RILGSSYSPAASASHAP----TYNEAPAT-APKPRVVT 360 370 380 390 400 410 420 430 440 450 460 KIAA06 TASIRPSVYQPVPASTYSPSPGANYSPTP-YTPSPAPAYTPSPAPAYTPSPVPTYTPSPA :::::::::: ::.:.:::.:::.:::.: :::::::::::::::::::::.:.:::::: gi|126 TASIRPSVYQSVPTSSYSPAPGATYSPAPAYTPSPAPAYTPSPAPAYTPSPAPAYTPSPA 410 420 430 440 450 460 470 480 490 500 510 520 KIAA06 PAYTPSPAPNYNP-----APSVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQT :::::::::.::: :::..::.::.::::::::::::.:::::::::.:::::::. gi|126 PAYTPSPAPSYNPSPYSPAPSATYSSGPGEPASRPPWVTDDNFSQKFAPGKTTTSISKQV 470 480 490 500 510 520 530 540 550 560 570 KIAA06 LPRGGPA----YTPAGPQVPPLARGTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRS ::::.:. ::::: ::: :::::.:::::::::.::: :::::..:::::::::::: gi|126 LPRGAPGPSPGYTPAGTQVPTLARGTIQRAERFPASNRTPHCGHCNSIIRGPFLVAMGRS 530 540 550 560 570 580 580 590 600 610 620 630 KIAA06 WHPEEFTCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTW ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 WHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTW 590 600 610 620 630 640 640 650 660 670 680 690 KIAA06 HTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHT ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 HTTCFVCAACRKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHT 650 660 670 680 690 700 700 710 720 730 KIAA06 WHDTCFICAVCHVNLEGQPFYSKKDRPLCKKHAHTINL :::::::::::::::::::::::::.::::::::.::. gi|126 WHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV 710 720 730 740 734 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Thu Mar 5 09:52:46 2009 done: Thu Mar 5 09:56:44 2009 Total Scan time: 1604.790 Total Display time: 0.430 Function used was FASTA [version 34.26.5 April 26, 2007]