FOXD2 ORF clone pFN21AB9597

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB9597

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Clone info.

Species

human

Clone Name

pFN21AB9597 Sequence (with vector) Restriction Map

Product ID

FHC16536

ORF Sequence

DNA sequence (1491 bp)
Protein sequence (497 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIBB9597

Symbol

FOXD2

Alias : FKHL17, FREAC-9, FREAC9

Description

forkhead box D2

Original Clone ID

cp00180

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1491 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 497 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS30708.1 1.4e-83 99.4 FOXD2 CCDS75259.1 5.5e-22 45.8 FOXD1 CCDS624.1 1.6e-16 42.9 FOXD3 CCDS2117.1 1.1e-15 45.0 FOXD4L1 CCDS47977.1 5.1e-15 49.5 FOXD4L5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001766 127 140 PR00053 Transcription factor IPR001766 148 165 PR00053 Transcription factor IPR001766 171 188 PR00053 Transcription factor HMMPfam IPR001766 127 222 PF00250 Transcription factor HMMSmart IPR001766 125 215 SM00339 Transcription factor ProfileScan IPR001766 127 221 PS50039 Transcription factor
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004465 495 602211 99.4 100.0 NP_004463 465 601091 45.8 97.6 NP_036315 478 607836,611539 42.9 93.2 NP_997188 439 601092 40.5 82.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9597 Download

>KIBB9597  1491 bp
ATGACCCTGGGCAGCTGCTGCTGCGAGATCATGTCCTCCGAGAGCTCCCCGGCCGCGCTG
TCCGAGGCCGACGCAGACATAGACGTGGTGGGCGGCGGCAGCGGCGGGGGGGAGCTCCCA
GCTCGCTCCGGGCCCCGCGCCCCCCGGGACGTGCTCCCCCACGGCCACGAGCCTCCCGCG
GAGGAAGCCGAGGCAGACTTAGCCGAGGACGAGGAGGAGTCTGGTGGCTGCTCGGACGGC
GAGCCCCGCGCTCTGGCGTCCCGGGGGGCGGCGGCCGCAGCGGGGAGCCCGGGGCCAGGC
GCCGCGGCGGCCCGCGGCGCAGCGGGGCCCGGGCCGGGACCGCCGTCGGGGGGCGCGGCG
ACGCGGAGCCCGCTGGTGAAGCCGCCCTACTCGTACATCGCGCTCATCACCATGGCCATC
CTGCAGAGCCCCAAGAAGCGGCTGACGTTGAGCGAGATCTGCGAGTTCATCAGCGGCCGC
TTCCCCTACTACCGGGAGAAGTTCCCCGCCTGGCAGAACAGCATCCGCCACAACCTCTCT
CTCAACGACTGCTTCGTCAAGATCCCCCGCGAGCCGGGCAACCCGGGCAAGGGCAACTAC
TGGACGCTGGACCCGGAGTCGGCCGACATGTTCGACAACGGCAGCTTCCTGCGGCGTCGC
AAGCGCTTCAAGCGGCAGCCCCTGCCGCCGCCGCACCCACACCCGCACCCTCACCCGGAG
CTGCTGCTGCGTGGCGGGGCCGCGGCGGCGGGGGATCCCGGCGCTTTCCTGCCCGGCTTC
GCTGCCTACGGCGCCTACGGCTACGGCTACGGGCTGGCTCTCCCGGCCTACGGCGCACCC
CCGCCGGGGCCGGCCCCGCATCCGCACCCGCACCCGCACCCGCACGCCTTCGCTTTCGCC
GCGGCAGCCGCCGCCGCTCCTTGCCAGCTGTCGGTACCCCCAGGCCGCGCCGCCGCGCCT
CCACCCGGACCTCCGACGGCCTCGGTGTTCGCAGGCGCGGGATCGGCCCCAGCTCCTGCG
CCTGCCTCAGGCTCGGGCCCGGGCCCGGGCCCCGCAGGCCTGCCCGCCTTCCTGGGCGCG
GAGCTGGGCTGCGCCAAAGCCTTCTACCCGGCGTCCCTGAGTCCTCCCGCAGCCGGCACC
GCGGCGGGTCTGCCCACCGCACTTCTGCGCCAGGGCCTCAAGACGGACGCGGGCGGTGGT
GCAGGCGGCGGGGGCGCCGGGGCAGGGCAGAGGCCTTCCTTCTCTATAGACCACATCATG
GGCCACGGTGGCGGCGGGGCAGCACCCCCGGGCGCCGGCGAGGGCTCTCCGGGACCGCCA
TTCGCGGCAGCCGCGGGTCCTGGGGGCCAAGCCCAGGTCTTGGCCATGCTGACTGCTCCG
GCCCTGGCTCCCGTTGCTGGCCACATTCGCCTCTCGCATCCCGGGGACGCGCTGCTGTCC
TCAGGGTCCCGGTTTGCCAGCAAAGTCGCCGGCCTTAGTGGCTGCCACTTC

ORF Protein

Cloned ORF protein sequence for pFN21AB9597 Download

>KIBB9597  497 aa
MTLGSCCCEIMSSESSPAALSEADADIDVVGGGSGGGELPARSGPRAPRDVLPHGHEPPA
EEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAA
TRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLS
LNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPE
LLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHPHAFAFA
AAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGA
ELGCAKAFYPASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIM
GHGGGGAAPPGAGEGSPGPPFAAAAGPGGQAQVLAMLTAPALAPVAGHIRLSHPGDALLS
SGSRFASKVAGLSGCHF

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9597 Download

>pFN21AB9597  6196 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGACCCTGGGCAGCTGCTGCTGCGAGATCATGTC
CTCCGAGAGCTCCCCGGCCGCGCTGTCCGAGGCCGACGCAGACATAGACGTGGTGGGCGG
CGGCAGCGGCGGGGGGGAGCTCCCAGCTCGCTCCGGGCCCCGCGCCCCCCGGGACGTGCT
CCCCCACGGCCACGAGCCTCCCGCGGAGGAAGCCGAGGCAGACTTAGCCGAGGACGAGGA
GGAGTCTGGTGGCTGCTCGGACGGCGAGCCCCGCGCTCTGGCGTCCCGGGGGGCGGCGGC
CGCAGCGGGGAGCCCGGGGCCAGGCGCCGCGGCGGCCCGCGGCGCAGCGGGGCCCGGGCC
GGGACCGCCGTCGGGGGGCGCGGCGACGCGGAGCCCGCTGGTGAAGCCGCCCTACTCGTA
CATCGCGCTCATCACCATGGCCATCCTGCAGAGCCCCAAGAAGCGGCTGACGTTGAGCGA
GATCTGCGAGTTCATCAGCGGCCGCTTCCCCTACTACCGGGAGAAGTTCCCCGCCTGGCA
GAACAGCATCCGCCACAACCTCTCTCTCAACGACTGCTTCGTCAAGATCCCCCGCGAGCC
GGGCAACCCGGGCAAGGGCAACTACTGGACGCTGGACCCGGAGTCGGCCGACATGTTCGA
CAACGGCAGCTTCCTGCGGCGTCGCAAGCGCTTCAAGCGGCAGCCCCTGCCGCCGCCGCA
CCCACACCCGCACCCTCACCCGGAGCTGCTGCTGCGTGGCGGGGCCGCGGCGGCGGGGGA
TCCCGGCGCTTTCCTGCCCGGCTTCGCTGCCTACGGCGCCTACGGCTACGGCTACGGGCT
GGCTCTCCCGGCCTACGGCGCACCCCCGCCGGGGCCGGCCCCGCATCCGCACCCGCACCC
GCACCCGCACGCCTTCGCTTTCGCCGCGGCAGCCGCCGCCGCTCCTTGCCAGCTGTCGGT
ACCCCCAGGCCGCGCCGCCGCGCCTCCACCCGGACCTCCGACGGCCTCGGTGTTCGCAGG
CGCGGGATCGGCCCCAGCTCCTGCGCCTGCCTCAGGCTCGGGCCCGGGCCCGGGCCCCGC
AGGCCTGCCCGCCTTCCTGGGCGCGGAGCTGGGCTGCGCCAAAGCCTTCTACCCGGCGTC
CCTGAGTCCTCCCGCAGCCGGCACCGCGGCGGGTCTGCCCACCGCACTTCTGCGCCAGGG
CCTCAAGACGGACGCGGGCGGTGGTGCAGGCGGCGGGGGCGCCGGGGCAGGGCAGAGGCC
TTCCTTCTCTATAGACCACATCATGGGCCACGGTGGCGGCGGGGCAGCACCCCCGGGCGC
CGGCGAGGGCTCTCCGGGACCGCCATTCGCGGCAGCCGCGGGTCCTGGGGGCCAAGCCCA
GGTCTTGGCCATGCTGACTGCTCCGGCCCTGGCTCCCGTTGCTGGCCACATTCGCCTCTC
GCATCCCGGGGACGCGCTGCTGTCCTCAGGGTCCCGGTTTGCCAGCAAAGTCGCCGGCCT
TAGTGGCTGCCACTTCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTC
GACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGG
CTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGAC
ATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGC
TTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAA
CAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAG
GTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTC
TTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAG
CACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTT
CGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATG
AGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTT
TTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGA
GTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAA
GAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGT
ATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTT
GAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGC
AGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGA
GGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGAT
CGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCT
GTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCC
CGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCG
GCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGC
GGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACG
ACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCA
CTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTC
ACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGT
GAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCC
ATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAA
ACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTC
CTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGG
CGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGC
TGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATC
GTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACA
GGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACT
ACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCG
GAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTT
TTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCT
TTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGA
GATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACG
CTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAG
TGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATC
AGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGT
GATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTA
CTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCG
TAGAGGATCGAGATCT