FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9597, 497 aa 1>>>pF1KB9597 497 - 497 aa - 497 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.8937+/-0.000419; mu= -2.6547+/- 0.026 mean_var=528.0157+/-111.432, 0's: 0 Z-trim(125.4): 148 B-trim: 895 in 1/60 Lambda= 0.055815 statistics sampled from 48817 (48997) to 48817 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.816), E-opt: 0.2 (0.574), width: 16 Scan time: 10.290 The best scores are: opt bits E(85289) NP_004465 (OMIM: 602211) forkhead box protein D2 [ ( 495) 3466 293.4 9.9e-79 NP_004463 (OMIM: 601091) forkhead box protein D1 [ ( 465) 1054 99.1 2.8e-20 NP_036315 (OMIM: 607836,611539) forkhead box prote ( 478) 840 81.9 4.4e-15 NP_036316 (OMIM: 611084) forkhead box protein D4-l ( 408) 806 79.1 2.7e-14 NP_954714 (OMIM: 611085) forkhead box protein D4-l ( 416) 778 76.9 1.3e-13 NP_954586 (OMIM: 611086) forkhead box protein D4-l ( 417) 773 76.5 1.7e-13 NP_997188 (OMIM: 601092) forkhead box protein D4 [ ( 439) 766 75.9 2.6e-13 NP_004464 (OMIM: 241850,602617,616534) forkhead bo ( 373) 737 73.5 1.2e-12 NP_036318 (OMIM: 107250,601094,610256) forkhead bo ( 319) 701 70.5 8e-12 NP_001443 (OMIM: 603250) forkhead box protein F2 [ ( 444) 666 67.9 6.9e-11 NP_001444 (OMIM: 601090,601631,602482) forkhead bo ( 553) 641 66.0 3.2e-10 NP_075555 (OMIM: 110100,605597,608996) forkhead bo ( 376) 618 63.9 9.1e-10 NP_150285 (OMIM: 612788) forkhead box protein Q1 [ ( 403) 594 62.0 3.6e-09 NP_004109 (OMIM: 602939) forkhead box protein S1 [ ( 330) 588 61.4 4.5e-09 NP_005242 (OMIM: 153400,602402) forkhead box prote ( 501) 583 61.3 7.7e-09 XP_016876735 (OMIM: 602294) PREDICTED: hepatocyte ( 439) 578 60.8 9.4e-09 NP_004487 (OMIM: 602294) hepatocyte nuclear factor ( 472) 578 60.8 9.8e-09 NP_005241 (OMIM: 603252) forkhead box protein L1 [ ( 345) 547 58.2 4.6e-08 NP_001442 (OMIM: 265380,601089) forkhead box prote ( 379) 548 58.3 4.6e-08 NP_005240 (OMIM: 164874,613454) forkhead box prote ( 489) 518 56.0 2.8e-07 NP_004488 (OMIM: 602295) hepatocyte nuclear factor ( 350) 504 54.7 5.1e-07 NP_710141 (OMIM: 600288) hepatocyte nuclear factor ( 457) 496 54.2 9.3e-07 NP_068556 (OMIM: 600288) hepatocyte nuclear factor ( 463) 496 54.2 9.4e-07 NP_001129121 (OMIM: 612351) forkhead box protein I ( 420) 491 53.8 1.2e-06 NP_036320 (OMIM: 274600,600791,601093) forkhead bo ( 378) 479 52.7 2.1e-06 NP_001445 (OMIM: 602291) forkhead box protein J1 [ ( 421) 452 50.6 1e-05 NP_004505 (OMIM: 147685) forkhead box protein K2 [ ( 660) 383 45.3 0.00064 NP_003914 (OMIM: 603621) forkhead box protein H1 [ ( 365) 367 43.7 0.0011 XP_011523664 (OMIM: 600838,601705) PREDICTED: fork ( 648) 370 44.3 0.0013 XP_016880717 (OMIM: 600838,601705) PREDICTED: fork ( 648) 370 44.3 0.0013 XP_011523661 (OMIM: 600838,601705) PREDICTED: fork ( 649) 370 44.3 0.0013 XP_011523660 (OMIM: 600838,601705) PREDICTED: fork ( 649) 370 44.3 0.0013 XP_005258103 (OMIM: 600838,601705) PREDICTED: fork ( 648) 367 44.0 0.0015 NP_003584 (OMIM: 600838,601705) forkhead box prote ( 648) 367 44.0 0.0015 XP_006710521 (OMIM: 616035) PREDICTED: forkhead bo ( 607) 365 43.8 0.0017 NP_001185780 (OMIM: 616035) forkhead box protein J ( 622) 365 43.8 0.0017 NP_001185779 (OMIM: 616035) forkhead box protein J ( 622) 365 43.8 0.0017 XP_011539328 (OMIM: 616035) PREDICTED: forkhead bo ( 622) 365 43.8 0.0017 NP_055762 (OMIM: 616035) forkhead box protein J3 i ( 622) 365 43.8 0.0017 XP_005270689 (OMIM: 616035) PREDICTED: forkhead bo ( 630) 365 43.8 0.0017 XP_016856182 (OMIM: 616035) PREDICTED: forkhead bo ( 573) 363 43.6 0.0018 NP_001185781 (OMIM: 616035) forkhead box protein J ( 588) 363 43.6 0.0018 XP_006710522 (OMIM: 616035) PREDICTED: forkhead bo ( 596) 363 43.6 0.0018 XP_011523671 (OMIM: 600838,601705) PREDICTED: fork ( 436) 358 43.1 0.002 XP_011523672 (OMIM: 600838,601705) PREDICTED: fork ( 436) 358 43.1 0.002 XP_011523670 (OMIM: 600838,601705) PREDICTED: fork ( 436) 358 43.1 0.002 XP_011523669 (OMIM: 600838,601705) PREDICTED: fork ( 462) 358 43.1 0.0021 XP_011513493 (OMIM: 616302) PREDICTED: forkhead bo ( 570) 349 42.5 0.0039 NP_001032242 (OMIM: 616302) forkhead box protein K ( 733) 349 42.6 0.0045 >>NP_004465 (OMIM: 602211) forkhead box protein D2 [Homo (495 aa) initn: 2279 init1: 2234 opt: 3466 Z-score: 1534.4 bits: 293.4 E(85289): 9.9e-79 Smith-Waterman score: 3466; 99.4% identity (99.4% similar) in 497 aa overlap (1-497:1-495) 10 20 30 40 50 60 pF1KB9 MTLGSCCCEIMSSESSPAALSEADADIDVVGGGSGGGELPARSGPRAPRDVLPHGHEPPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 MTLGSCCCEIMSSESSPAALSEADADIDVVGGGSGGGELPARSGPRAPRDVLPHGHEPPA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 EEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 EEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 TRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 TRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 LNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 LNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 LLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHPHAFAFA :::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: NP_004 LLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHP--HAFAFA 250 260 270 280 290 310 320 330 340 350 360 pF1KB9 AAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 AAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGA 300 310 320 330 340 350 370 380 390 400 410 420 pF1KB9 ELGCAKAFYPASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIM ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 ELGCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIM 360 370 380 390 400 410 430 440 450 460 470 480 pF1KB9 GHGGGGAAPPGAGEGSPGPPFAAAAGPGGQAQVLAMLTAPALAPVAGHIRLSHPGDALLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 GHGGGGAAPPGAGEGSPGPPFAAAAGPGGQAQVLAMLTAPALAPVAGHIRLSHPGDALLS 420 430 440 450 460 470 490 pF1KB9 SGSRFASKVAGLSGCHF ::::::::::::::::: NP_004 SGSRFASKVAGLSGCHF 480 490 >>NP_004463 (OMIM: 601091) forkhead box protein D1 [Homo (465 aa) initn: 953 init1: 822 opt: 1054 Z-score: 485.0 bits: 99.1 E(85289): 2.8e-20 Smith-Waterman score: 1100; 45.8% identity (62.3% similar) in 509 aa overlap (11-495:3-465) 10 20 30 40 50 pF1KB9 MTLGSCCCEIMSSESSPAALSEADADIDVVGGGSGGG----ELPARSGPRAPRDVLPHGH .:.: : :. ..:::::: : : ..: .:: ..: . NP_004 MTLSTEMSDASGLAEETDIDVVGEGEDEEDEEEEDDDEGGGGGPRLAVPAQR 10 20 30 40 50 60 70 80 90 100 110 pF1KB9 EPPAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPS . .. .. .::: :. . . : . :... . :::. ::. ::.: : : . NP_004 R---RRRRSYAGEDELEDLEEEEDDDDILLAPPAGGSPAPPGPAPAAGAGAGGGGGGGGA 60 70 80 90 100 120 130 140 150 160 170 pF1KB9 GGAAT-----RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAW ::... ..:::::::::::::::::::::::::::::::::::::::::::::::: NP_004 GGGGSAGSGAKNPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAW 110 120 130 140 150 160 180 190 200 210 220 230 pF1KB9 QNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: NP_004 QNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLLPP 170 180 190 200 210 220 240 250 260 270 pF1KB9 HPHPHPHPELLLRGGAAA--AGDPGA----FLPGFA------AYGAYGYGYGLALPAYGA . :::::..:: ::::.: : :. .:: :: :::: :: : : NP_004 NAAAAES--LLLRGAGAAGGAGDPAAAAALFPPAPPPPPHAYGYGPYGCGYGLQLPPY-A 230 240 250 260 270 280 280 290 300 310 320 330 pF1KB9 PPPGPAPHPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAP :: . : : ::::::: : :: ::: .:. .: .. . : NP_004 PPSAL----------FAAAAAAAAAAAFHPHSPPP-----PPPPHGAAAELARTAFGYRP 290 300 310 320 330 340 350 360 370 380 390 pF1KB9 APASGSGPGPGPAGLPAFLGAELGCAKAFYPASLSPPAAGTAAGLPTALLRQGLKTDAGG : ... ::: ::. : :. . : : : :. .:. . :.: :.. NP_004 HPLGAALPGPLPAS-AAKAGGPGASALARSPFSIESIIGGSLG--PAA---------AAA 340 350 360 370 400 410 420 430 440 450 pF1KB9 GAGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGAGEGSPGPPFAAAAGPGGQ-AQVLAMLT .:. ..:.: :: : ::::. : .. : ::.::.. .. :. . NP_004 AAAQAAAAAQASPSPS---------PVAAPPAPGSSGGGCAAQAAVGPAAALTRSLVAAA 380 390 400 410 420 430 460 470 480 490 pF1KB9 APALAPVAGHIRLS--HPGDALLSSGSRFASKVAGLSGCHF : : . :.. :. : : :: :: :.... :.: NP_004 AAAASSVSSSAALGTLHQGTAL-SSVENFTARI---SNC 440 450 460 >>NP_036315 (OMIM: 607836,611539) forkhead box protein D (478 aa) initn: 903 init1: 740 opt: 840 Z-score: 391.8 bits: 81.9 E(85289): 4.4e-15 Smith-Waterman score: 966; 42.9% identity (57.5% similar) in 487 aa overlap (12-474:10-434) 10 20 30 40 pF1KB9 MTLGSCCCEIMSSESSPAALSEADADIDVVGGGSGGGE-------LPARSGPRAPR---- :. :. ..:. :.:::::: :. : : . .:: : NP_036 MTLSGGGSASDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEA 10 20 30 40 50 50 60 70 80 90 100 pF1KB9 DVLP-----HGHEPPAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAA : .: ::. : .. : .. .:. :. :: : : : .. NP_036 DEVPPAAPHHGQPQPPHQQPLTLPKEAAGAGAGPGGDV------GAPEADGCKGGVGGEE 60 70 80 90 100 110 110 120 130 140 150 pF1KB9 RGAAGPGPGPPSGGAATRSP------LVKPPYSYIALITMAILQSPKKRLTLSEICEFIS ::.: ::: ::.:. .: ::::::::::::::::::::.:.:::: :::::: NP_036 GGASGGGPGAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFIS 120 130 140 150 160 170 160 170 180 190 200 210 pF1KB9 GRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLR .::::::::::::::::::::::::::::::::::::::::::::::.: :::::::::: NP_036 NRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLR 180 190 200 210 220 230 220 230 240 250 260 270 pF1KB9 RRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYG :::::::. . : . . :.... .: . .: .: : :: ::: NP_036 RRKRFKRHQ----QEHLREQTALMMQSFGAYSLAAAA-----GAAGPYGRPYGLH----- 240 250 260 270 280 290 300 310 320 330 pF1KB9 APPPGPAPHPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPA :: . :: : : :::::: ..:: . :: : : : NP_036 -----PAAAAGAYSHPAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPS-----GELGR 280 290 300 310 320 340 350 360 370 380 390 pF1KB9 PAPASGSGPGPGPAGLPAFLGAELGCAKAFYPASLSPPAAGTAAGLPTALLRQGLKTDAG : : :: ::: : :.. :: : : :. . ::::.:.: .:.. . NP_036 KAAAFGSQLGPG---LQLQLNS-LGAAAA---AAGTAGAAGTTASL--------IKSEPS 330 340 350 360 370 400 410 420 430 440 450 pF1KB9 GGAGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGA--GEGSPGPPFAAAAGPGGQAQVLAM . ::::::..:.: :: ::: :. : : : ...: :: . . .. NP_036 A-----------RPSFSIENIIG--GGPAAPGGSAVGAGVAG----GTGGSGGGSTAQSF 380 390 400 410 460 470 480 490 pF1KB9 LTAPALAPVAGHIRLSHPGDALLSSGSRFASKVAGLSGCHF : :. . :. . .: NP_036 LRPPGTVQSAALMATHQPLSLSRTTATIAPILSVPLSGQFLQPAASAAAAAAAAAQAKWP 420 430 440 450 460 470 >>NP_036316 (OMIM: 611084) forkhead box protein D4-like (408 aa) initn: 788 init1: 692 opt: 806 Z-score: 377.7 bits: 79.1 E(85289): 2.7e-14 Smith-Waterman score: 832; 45.0% identity (57.7% similar) in 409 aa overlap (38-407:7-394) 10 20 30 40 50 60 pF1KB9 CEIMSSESSPAALSEADADIDVVGGGSGGGELPARSGP-RAPRDVLPHGHEPP----AEE : : :: : :. :: :.. .:: NP_036 MNLPRAERP-RSTPQRSLRD--SDGEDGKIDVLGEE 10 20 30 70 80 90 100 110 pF1KB9 AEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPG-PG-------- . : .::::: .. . : . .: .: : : ::. :. NP_036 EDEDEVEDEEEEASQKFLEQSLQPGLQVARWGGVALPREHIEGG--GPSDPSEFGTEFRA 40 50 60 70 80 90 120 130 140 150 160 170 pF1KB9 PPSGGAAT---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPA :: ..::. :.: .::::::::::::::::::.:::::: :: ::::::::::.:::: NP_036 PPRSAAASEDARQP-AKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPA 100 110 120 130 140 150 180 190 200 210 220 230 pF1KB9 WQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPP :::::::::::::::::::::::.::::.::.::: : :::::::::::::::::. : : NP_036 WQNSIRHNLSLNDCFVKIPREPGHPGKGTYWSLDPASQDMFDNGSFLRRRKRFKRHQLTP 160 170 180 190 200 210 240 250 260 270 280 pF1KB9 PHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPP---PGPAPH ::: : : .. :: .: :: :: . : :. :: : :: :. NP_036 GAHLPHPFP---LPAAHAALHNPR---PG-PLLGAPA----LPQPVPGAYPNTAPGRRPY 220 230 240 250 290 300 310 320 330 pF1KB9 PHPHPHPHAFAF--AAAAAAAPCQLS----VPPGRAAAPPP--GPPTASVFAGAGSAPAP :::: . . : : :.:: . . :: . : :: : .: :. NP_036 ALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQPSLGPQPWEEGKGLASPPGG 260 270 280 290 300 310 340 350 360 370 380 pF1KB9 APAS-----------GSGPGPGPAGLPAFLGAELGCAKAFYPASLSPPAAGTAAGLPTAL . : :.: : . . :. : : :.::: :.:::. . NP_036 GCISFSIESIMQGVRGAGTGAAQSLSPT---AWSYCPLLQRPSSLSDNFAATAAA-SGGG 320 330 340 350 360 370 390 400 410 420 430 440 pF1KB9 LRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGAGEGSPGPPFAAAAGPG ::: :.. : ::: . .: NP_036 LRQRLRSHQGRGAGRAPVGRVGAAAVSGGGRGL 380 390 400 >>NP_954714 (OMIM: 611085) forkhead box protein D4-like (416 aa) initn: 782 init1: 701 opt: 778 Z-score: 365.5 bits: 76.9 E(85289): 1.3e-13 Smith-Waterman score: 785; 49.5% identity (62.9% similar) in 307 aa overlap (38-324:7-297) 10 20 30 40 50 60 pF1KB9 CEIMSSESSPAALSEADADIDVVGGGSGGGELPARSGP-RAPRDVLPHGHEPP----AEE : : :: : :. :: :.. .:: NP_954 MNLPRAERP-RSTPQRSLRD--SDGEDGKIDVLGEE 10 20 30 70 80 90 100 110 pF1KB9 AEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPG-PG-------- . : .::::: . . : . .: .: : .:..::. :. NP_954 EDEDEVEDEEEEARQQFLEQSLQPGLQVARWGGVALP-REHIEGGGGPSDPSEFGTKFRA 40 50 60 70 80 90 120 130 140 150 160 170 pF1KB9 PPSGGAAT---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPA :: ..::. :.: .::::::::::::::::.:.:::::: :: ::::::::::.:::: NP_954 PPRSAAASEDARQP-AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPA 100 110 120 130 140 150 180 190 200 210 220 230 pF1KB9 WQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPP :::::::::::::::::::::::.:::::::.::: : :::::::::::::::::. : : NP_954 WQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTP 160 170 180 190 200 210 240 250 260 270 280 pF1KB9 PHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPP---PGPAPH ::: : : .. :: .: :: :: . :. :: : :: :. NP_954 GAHLPHPFP---LPAAHAALHNPH---PG-PLLGAPAPPQ----PVPGAYPNTAPGRRPY 220 230 240 250 260 290 300 310 320 330 340 pF1KB9 PHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGP :::: . . .: . : .. . :.: : : NP_954 ALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRRARVWRRHREA 270 280 290 300 310 320 350 360 370 380 390 400 pF1KB9 GPGPAGLPAFLGAELGCAKAFYPASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAG NP_954 DASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQACCIPKPLPLCCKCPPPLLL 330 340 350 360 370 380 >>NP_954586 (OMIM: 611086) forkhead box protein D4-like (417 aa) initn: 746 init1: 695 opt: 773 Z-score: 363.3 bits: 76.5 E(85289): 1.7e-13 Smith-Waterman score: 789; 51.3% identity (65.2% similar) in 279 aa overlap (61-324:32-297) 40 50 60 70 80 90 pF1KB9 GGGSGGGELPARSGPRAPRDVLPHGHEPPAEEAEADLAEDEEESGGCSDGEPRALASRGA :: . : .:::::... . : . . NP_954 NLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQV 10 20 30 40 50 60 100 110 120 130 pF1KB9 AAAAGSPGPGAAAARGAAGPG-PG--------PPSGGAAT---RSPLVKPPYSYIALITM : .: : .:..::. :. :: ..::. :.: .:::::::::::: NP_954 ARWGGVALP-REHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQP-AKPPYSYIALITM 70 80 90 100 110 140 150 160 170 180 190 pF1KB9 AILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKG ::::.:.:::::: :: ::::::::::.:::::::::::::::::::::::::::.:::: NP_954 AILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKG 120 130 140 150 160 170 200 210 220 230 240 250 pF1KB9 NYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLP :::.::: : :::::::::::::::::. : : ::: : : .. :: .: : NP_954 NYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFP---LPAAHAALHNPR---P 180 190 200 210 220 230 260 270 280 290 300 310 pF1KB9 GFAAYGAYGYGYGLALPAYGAPP---PGPAPHPHPHPHPHAFAFAAAAAAAPCQLSVPPG : :: . :. :: : :: :. :::: . . .: . : .. . NP_954 G-PLLGAPAPPQ----PVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGA 240 250 260 270 280 320 330 340 350 360 370 pF1KB9 RAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAELGCAKAFYPASLSP :.: : : NP_954 ALATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRP 290 300 310 320 330 340 >>NP_997188 (OMIM: 601092) forkhead box protein D4 [Homo (439 aa) initn: 731 init1: 671 opt: 766 Z-score: 360.0 bits: 75.9 E(85289): 2.6e-13 Smith-Waterman score: 772; 40.5% identity (55.3% similar) in 452 aa overlap (42-452:10-434) 20 30 40 50 60 70 pF1KB9 SSESSPAALSEADADIDVVGGGSGGGELPARSGP-RAPRDVLPHGHEPPAEEAEADLAED :: : :. :: :.. . . :: NP_997 MNLPRAERLRSTPQRSLRD--SDGEDGKIDVLGEEEDED 10 20 30 80 90 100 110 120 pF1KB9 EEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPG-PG--------PPSGGAAT :::... . : . .: .: : .:..::. :. :: ..::. NP_997 EEEAASQQFLEQSLQPGLQVARWGGVALP-REHIEGGGGPSDPSEFGTEFRAPPRSAAAS 40 50 60 70 80 90 130 140 150 160 170 pF1KB9 ---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHN :.: .::: ::::::::::::::.:::::: :: ::: ::::::.:::::::::::: NP_997 EDARQP-AKPPSSYIALITMAILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQNSIRHN 100 110 120 130 140 150 180 190 200 210 220 230 pF1KB9 LSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKR-QPLPPPH-PHPH ::::::::::::::: :::::::.::: : :::::::::::::::.: :: : : ::: NP_997 LSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPF 160 170 180 190 200 210 240 250 260 270 280 290 pF1KB9 PHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPP---PGPAPHPHPHPH : : .. :: .: :: :: . :. :: : :: :. ::: NP_997 PLP-----AAHAALHNPR---PG-PLLGAPAPPQ----PVPGAYPNTGPGRRPYALLHPH 220 230 240 250 260 300 310 320 330 340 pF1KB9 PHAFAFAAAAAAAPCQLSVPPGRAAAPPPGP---P--------TASVFAGAGSAPAPAPA : . . .: : : .. . :.: : : : : :. : : : NP_997 PPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSA 270 280 290 300 310 320 350 360 370 380 390 pF1KB9 ---SGSGPGPGPAGLPAFLGAELGCAKAFYPASLSPPAAGTAAGLPTALLRQGLKTD--- : .: : :: : . : . . : .. . : : .: . . NP_997 LRVSCKGSGERVQGLRRV------CPR---PRGATAPCSSDRQACRTILQQQQRHQEEDC 330 340 350 360 370 400 410 420 430 440 450 pF1KB9 AGGGAGGGGAGAGQRPSFSID----HIMGHGGG--GAAPPGAGEGSPGPPFAAAAGPGGQ :.: : :: : . : . . ...:.: . : : .:::. .: : .. :.. NP_997 ANGCAPTKGAVLGGHLSAASALLRYQAVAEGSGLTSLAAPLGGEGT-SPVFLVSPTPSSL 380 390 400 410 420 430 460 470 480 490 pF1KB9 AQVLAMLTAPALAPVAGHIRLSHPGDALLSSGSRFASKVAGLSGCHF :. NP_997 AESAGPS >>NP_004464 (OMIM: 241850,602617,616534) forkhead box pr (373 aa) initn: 583 init1: 535 opt: 737 Z-score: 348.1 bits: 73.5 E(85289): 1.2e-12 Smith-Waterman score: 753; 41.3% identity (59.7% similar) in 390 aa overlap (73-425:4-365) 50 60 70 80 90 pF1KB9 SGPRAPRDVLPHGHEPPAEEAEADLAEDEEESGGCSDGEPRALAS----RGAAAAAGSPG ::: .:..::. :: .:: :. NP_004 MTAESGP-PPPQPEVLATVKEERGETAA-GAGV 10 20 30 100 110 120 130 140 150 pF1KB9 PGAAAARGAAGPGPGPPSGGAATRSPLV--KPPYSYIALITMAILQSPKKRLTLSEICEF :: :..::: :: . :: ::::::::::.::: ..:..::::. : .: NP_004 PGEATGRGA---------GGRRRKRPLQRGKPPYSYIALIAMAIAHAPERRLTLGGIYKF 40 50 60 70 80 160 170 180 190 200 210 pF1KB9 ISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSF :. :::.::.. :::::::::.:::::.::::: : :::::::.:::.. :::..::: NP_004 ITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAEDMFESGSF 90 100 110 120 130 140 220 230 240 250 260 270 pF1KB9 LRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPA :::::::::. : .: . : ..::::. .:..:: : : : :. : NP_004 LRRRKRFKRSDLST-YP-AYMHDAAAAAAAAAAAAAAAAIFPG--AVPAARPPYPGAVYA 150 160 170 180 190 280 290 300 310 320 330 pF1KB9 YGAPPPGPAPHPHPHPHPHAFAFAAAAAAAPCQL-SVPPGRAAAP-----PPGPPTASVF ::: :: : .: ::. .::.. .. : : .: : :: . .: NP_004 GYAPPSLAAPPPVYYP---------AASPGPCRVFGLVPERPLSPELGPAPSGPGGSCAF 200 210 220 230 240 340 350 360 370 pF1KB9 AGAGSAPA------PAPASGSGPGPGPAGLPAFLGAE----LGCAKAFYPAS------LS :.:: ::: :: .:. :. : :. : . : ..:.. :. : NP_004 ASAG-APATTTGYQPAGCTGARPANPSAYAAAYAGPDGAYPQGAGSAIFAAAGRLAGPAS 250 260 270 280 290 300 380 390 400 410 420 pF1KB9 PPAAGTAAGLPTALLRQGLKTDAGGGA-------GG--GGAGAGQRPSFSIDHIMGHGGG :::.:...:. :.. : . . :: :: :::.:: .. : .. :: NP_004 PPAGGSSGGVETTVDFYGRTSPGQFGALGACYNPGGQLGGASAG---AYHARHAAAYPGG 310 320 330 340 350 360 430 440 450 460 470 480 pF1KB9 GAAPPGAGEGSPGPPFAAAAGPGGQAQVLAMLTAPALAPVAGHIRLSHPGDALLSSGSRF NP_004 IDRFVSAM 370 >>NP_036318 (OMIM: 107250,601094,610256) forkhead box pr (319 aa) initn: 656 init1: 562 opt: 701 Z-score: 333.2 bits: 70.5 E(85289): 8e-12 Smith-Waterman score: 736; 49.0% identity (62.1% similar) in 290 aa overlap (90-357:33-311) 60 70 80 90 100 110 pF1KB9 AEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGA :.: : :::.:: :.: :.: . : NP_036 GRSDMDPPAAFSGFPALPAVAPSGPPPSPLAGAEPGREPEEAAAGRGEAAPTPAP-GPGR 10 20 30 40 50 60 120 130 140 150 160 170 pF1KB9 ATRSPLV--KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRH : :: ::::::::::.::. ..: .::::. : .::. :: .::.. ::::::: NP_036 RRRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRH 70 80 90 100 110 120 180 190 200 210 220 pF1KB9 NLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLP-------- ::.:::::::.::::::::::::::::: .:::::::::::::::::: :: NP_036 NLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKRFKRAELPAHAAAAPG 130 140 150 160 170 180 230 240 250 260 270 280 pF1KB9 PPHPHPH------PHPELLLRGGAAAAG-DPGAFLPGFAAYGAYGYGYGLALPAYGAP-P :: : :. : : ::. .:. : .: : : :.. . . :: . ::: : NP_036 PPLPFPYAPYAPAPGPALLVPPPSAGPGPSPPARL--FSVDSLVNLQPELA--GLGAPEP 190 200 210 220 230 290 300 310 320 330 pF1KB9 PGPAPHPHPHPHPHAFAFAAAAAAAPCQLSVPPGR---AAAPPPGP-PTASVFAGAGSAP : : : :: ::::. : .:: :. : ::: :. ..: :: : NP_036 PCCAA---PDAAAAAFPPCAAAASPPLYSQVPDRLVLPATRPGPGPLPAEPLLALAGPAA 240 250 260 270 280 290 340 350 360 370 380 390 pF1KB9 APAPASGSGPGPGPAGLPAFLGAELGCAKAFYPASLSPPAAGTAAGLPTALLRQGLKTDA : .: : :: . :.: NP_036 ALGPLS---PGEAYLRQPGFASGLERYL 300 310 >>NP_001443 (OMIM: 603250) forkhead box protein F2 [Homo (444 aa) initn: 624 init1: 521 opt: 666 Z-score: 316.4 bits: 67.9 E(85289): 6.9e-11 Smith-Waterman score: 666; 38.7% identity (58.3% similar) in 372 aa overlap (36-388:5-355) 10 20 30 40 50 60 pF1KB9 CCCEIMSSESSPAALSEADADIDVVGGGSGGGELPA---RSGPRAPRDVLPHGHEPPAEE :: :: :. .: . :: NP_001 MTTEGGPPPAPLRRACSPVPGALQAALMSPPPAA 10 20 30 70 80 90 100 110 pF1KB9 AEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGA--- : : : : :.. :.. .: ... .:..: .:: ..:.: : : :::: NP_001 AAAAAAAPETTSSSSSSSSASCASSSSSSNSASAP---SAACKSAGGGGAGAGSGGAKKA 40 50 60 70 80 90 120 130 140 150 160 170 pF1KB9 --ATRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRH . : : ::::::::::.::: .::.:::::::: .:...:::..: . .:.::.:: NP_001 SSGLRRPE-KPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRH 100 110 120 130 140 150 180 190 200 210 220 230 pF1KB9 NLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKR--QPLPPPHPH- :::::.::.:.:. : ::::.:::.:: : ::..::: :: . :.: : : : . . NP_001 NLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYHRV 160 170 180 190 200 210 240 250 260 270 280 290 pF1KB9 --PHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPA-YGAPPPGPAPHPHPH :: : . :.: : : . :.:: : . .:: : : .:. : ::: NP_001 VSGLGFGASLLPQGFDFQAPPSAPL-GCHSQGGYG-GLDM-MPAGYDAGAGAPS-HAHPH 220 230 240 250 260 300 310 320 330 340 pF1KB9 PHPHAFAFAAAAAAAPCQLSVPPGR---AAAPPPGPPTASVFAGAGSAPAPAPASGSGPG : : . : ..: :: :. : :. : . ::.:.. .: :.:.: NP_001 HHHHHHV--------P-HMSPNPGSTYMASCPVPAGPGGVGAAGGGGGGDYGPDSSSSPV 270 280 290 300 310 350 360 370 380 390 400 pF1KB9 PGPAGLPAFLGAELGCAKAFY-PAS-LSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGA :. ::. .: . : . . ::. : :.:. : :: NP_001 PSS---PAMASA-IECHSPYTSPAAHWSSPGASPYLKQPPALTPSSNPAASAGLHSSMSS 320 330 340 350 360 370 410 420 430 440 450 460 pF1KB9 GAGQRPSFSIDHIMGHGGGGAAPPGAGEGSPGPPFAAAAGPGGQAQVLAMLTAPALAPVA NP_001 YSLEQSYLHQNAREDLSVGLPRYQHHSTPVCDRKDFVLNFNGISSFHPSASGSYYHHHHQ 380 390 400 410 420 430 497 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:55:25 2016 done: Tue Nov 8 04:55:26 2016 Total Scan time: 10.290 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]