TCEA1 ORF clone pF1KB8935

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Flexi ORF Clone pF1KB8935

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Clone info.

Species

human

Clone Name

pF1KB8935 Sequence (with vector) Restriction Map

Product ID

FXC03105

HaloTag Clone PID

FHC03105

ORF Sequence

DNA sequence (852 bp)
Protein sequence (284 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464783]

Gene

KIBB8935

Symbol

TCEA1

Alias : GTF2S, SII, TCEA, TF2S, TFIIS

Description

transcription elongation factor A (SII), 1

Original Clone ID

cp00970

Features of the cloned ORF sequence

Description

Length: 852 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 284 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS47857.1 1.7e-81 95.4 TCEA1 CCDS47858.1 4.6e-81 93.4 TCEA1 CCDS13554.1 5.9e-52 66.5 TCEA2 CCDS13553.1 6.4e-52 61.8 TCEA2 CCDS44086.1 1.3e-36 52.9 TCEA3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR017923 16 61 PF08711 Transcription factor IIS IPR003618 119 233 PF07500 Transcription elongation factor S-II IPR001222 244 282 PF01096 Zinc finger HMMSmart IPR003617 5 62 SM00509 Transcription elongation factor IPR017890 121 222 SM00510 Transcription elongation factor S-IIM IPR001222 244 283 SM00440 Zinc finger HMMTigr IPR006289 10 284 TIGR01385 Transcription elongation factor ProfileScan IPR017923 1 63 PS51319 Transcription factor IIS IPR003618 123 239 PS51321 Transcription elongation factor S-II IPR001222 242 282 PS51133 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_958845 280 601425 95.4 100.0 NP_006747 301 601425 93.4 100.0 XP_011515880 266 601425 98.9 93.7 XP_006716530 254 601425 98.8 89.4 XP_016883525 272 604784 66.5 94.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8935 Download

>KIBB8935  852 bp
ATGGAGGACGAAGTGGTCCGCTTTGCCAAGAAGATGGACAAGATGAATATTCCTATGACC
CTGGAATTACTGCAGTCCACAAGAATCGGAATGTCAGTTAATGCTATTCGCAAGCAGAGT
ACAGATGAGGAAGTTACATCTTTGGCAAAGTCTCTCATCAAATCCTGGAAAAAATTATTA
GATGGGCCATCAACTGAGAAAGACCTTGACGAAAAGAAGAAAGAACCTGCAATTACATCG
CAGAACAGCCCTGAGGCAAGAGAAGAAAGTACTTCCAGCGGCAATGTAAGCAACAGAAAG
GATGAGACAAATGCTCGAGATACTTATGTTTCATCCTTTCCTCGGGCACCAAGCACTTCT
GATTCTGTGCAGTTGAAGTGTAGGGAGATGCTTGCTGCAGCTCTTCGAACAGGGGATGAC
TACATTGCAATTGGAGCTGATGAGGAAGAATTAGGATCTCAAATTGAAGAAGCTATATAT
CAAGAAATAAGGAATACAGACATGAAATACAAAAATAGAGTACGAAGTAGGATATCAAAT
CTTAAAGATGCAAAAAATCCAAATTTAAGGAAAAATGTCCTCTGTGGGAATATTCCTCCT
GACTTATTTGCTAGAATGACAGCAGAGGAAATGGCTAGTGATGAGCTGAAAGAGATGTGG
AAAAACTTGACCAAAGAAGCCATCAGAGAGCATCAGATGGCCAAGACTGGTGGGACCCAG
ACTGACTTGTTCACATGTGGCAAATGTAAAAAGAAGAATTGCACTTACACACAGGTACAA
ACCCGTAGTGCTGATGAACCAGTGACAACATTTGTTGTCTGTAATGAATGTGGAAATCGA
TGGAAGTTCTGT

ORF Protein

Cloned ORF protein sequence for pF1KB8935 Download

>KIBB8935  284 aa
MEDEVVRFAKKMDKMNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL
DGPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTS
DSVQLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISN
LKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMWKNLTKEAIREHQMAKTGGTQ
TDLFTCGKCKKKNCTYTQVQTRSADEPVTTFVVCNECGNRWKFC

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8935 Download

>pF1KB8935  3965 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAGGACGAA
GTGGTCCGCTTTGCCAAGAAGATGGACAAGATGAATATTCCTATGACCCTGGAATTACTG
CAGTCCACAAGAATCGGAATGTCAGTTAATGCTATTCGCAAGCAGAGTACAGATGAGGAA
GTTACATCTTTGGCAAAGTCTCTCATCAAATCCTGGAAAAAATTATTAGATGGGCCATCA
ACTGAGAAAGACCTTGACGAAAAGAAGAAAGAACCTGCAATTACATCGCAGAACAGCCCT
GAGGCAAGAGAAGAAAGTACTTCCAGCGGCAATGTAAGCAACAGAAAGGATGAGACAAAT
GCTCGAGATACTTATGTTTCATCCTTTCCTCGGGCACCAAGCACTTCTGATTCTGTGCAG
TTGAAGTGTAGGGAGATGCTTGCTGCAGCTCTTCGAACAGGGGATGACTACATTGCAATT
GGAGCTGATGAGGAAGAATTAGGATCTCAAATTGAAGAAGCTATATATCAAGAAATAAGG
AATACAGACATGAAATACAAAAATAGAGTACGAAGTAGGATATCAAATCTTAAAGATGCA
AAAAATCCAAATTTAAGGAAAAATGTCCTCTGTGGGAATATTCCTCCTGACTTATTTGCT
AGAATGACAGCAGAGGAAATGGCTAGTGATGAGCTGAAAGAGATGTGGAAAAACTTGACC
AAAGAAGCCATCAGAGAGCATCAGATGGCCAAGACTGGTGGGACCCAGACTGACTTGTTC
ACATGTGGCAAATGTAAAAAGAAGAATTGCACTTACACACAGGTACAAACCCGTAGTGCT
GATGAACCAGTGACAACATTTGTTGTCTGTAATGAATGTGGAAATCGATGGAAGTTCTGT
GTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCA
AGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGA
GCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAA
AGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCA
TGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGAT
AGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGT
GTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAA
GAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATG
GCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGA
TGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGG
GTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCC
GTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGT
GCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTT
CCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGC
GAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATC
ATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCAC
CAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAG
GATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAG
GCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAAT
ATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCG
GACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAA
TGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCC
TTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACC
AAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATC
AGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAA
AAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAA
TCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCC
CCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTC
CGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAG
TTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGA
CCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATC
GCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTAC
AGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTG
CGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACA
AACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAA
AGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAA
CTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTT
ATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATG
AAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCAT
AGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGT
TGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAA
TTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCA
GTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGAT
TAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGT
GGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGT
GGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGT
CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGA
CAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAG
GACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCC
TTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCAT