RAB9B ORF clone pF1KB8759

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone pF1KB8759

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Clone info.

Species

human

Clone Name

pF1KB8759 Sequence (with vector) Restriction Map

Product ID

FXC02998

HaloTag Clone PID

FHC02998

ORF Sequence

DNA sequence (603 bp)
Protein sequence (201 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464683]

Gene

KIBB8759

Symbol

RAB9B

Alias : RAB9L, Rab-9L

Description

RAB9B, member RAS oncogene family

Original Clone ID

cp00794

Features of the cloned ORF sequence

Description

Length: 603 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 201 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS14515.1 8.3e-79 100.0 RAB9B CCDS14156.1 5.3e-61 76.1 RAB9A CCDS3052.1 1.2e-37 52.2 RAB7A CCDS73011.1 4.5e-25 40.9 RAB7B CCDS10212.1 5.2e-22 40.5 RAB11A The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001806 8 29 PR00449 Ras GTPase IPR001806 31 47 PR00449 Ras GTPase IPR001806 49 71 PR00449 Ras GTPase IPR001806 115 128 PR00449 Ras GTPase IPR001806 150 172 PR00449 Ras GTPase HMMPfam IPR013753 9 173 PF00071 Ras HMMSmart IPR003577 5 175 SM00173 Ras small GTPase IPR003579 8 175 SM00175 Ras small GTPase IPR003578 10 175 SM00174 Small GTPase IPR002041 13 200 SM00176 Ran GTPase HMMTigr IPR005225 9 166 TIGR00231 Small GTP-binding protein domain ProfileScan IPR020851 2 201 PS51419 Small GTPase
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_057454 201 300285 100.0 100.0 XP_016885453 201 300284 76.1 100.0 NP_001182257 201 300284 76.1 100.0 NP_004242 201 300284 76.1 100.0 NP_004628 207 600882,602298 52.2 99.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8759 Download

>KIBB8759  603 bp
ATGAGTGGGAAATCCCTGCTCTTAAAGGTCATTCTCTTGGGTGATGGTGGAGTTGGGAAA
AGTTCGCTTATGAACCGTTACGTAACCAACAAATTTGACTCCCAGGCTTTTCACACCATA
GGGGTAGAGTTCTTAAATCGAGATCTGGAGGTAGATGGACGCTTTGTAACCCTCCAGATC
TGGGACACTGCAGGGCAGGAACGTTTCAAGAGCCTTAGGACACCCTTCTACAGGGGAGCA
GACTGCTGCCTCTTGACCTTCAGCGTGGATGATCGGCAGAGCTTCGAGAATCTTGGTAAC
TGGCAGAAAGAATTTATTTACTATGCGGATGTGAAGGACCCTGAGCATTTCCCCTTTGTA
GTTCTGGGTAACAAGGTAGACAAAGAGGATAGGCAAGTGACTACTGAGGAGGCACAAACC
TGGTGCATGGAGAATGGGGATTACCCTTATTTAGAAACTAGTGCCAAAGATGATACTAAT
GTGACAGTGGCCTTTGAAGAAGCTGTCAGGCAGGTGCTGGCTGTAGAGGAACAGCTGGAG
CATTGCATGTTGGGTCACACCATTGACTTGAACAGTGGCTCCAAAGCAGGGTCTTCGTGC
TGT

ORF Protein

Cloned ORF protein sequence for pF1KB8759 Download

>KIBB8759  201 aa
MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQI
WDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFV
VLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLE
HCMLGHTIDLNSGSKAGSSCC

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8759 Download

>pF1KB8759  3716 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGTGGGAAA
TCCCTGCTCTTAAAGGTCATTCTCTTGGGTGATGGTGGAGTTGGGAAAAGTTCGCTTATG
AACCGTTACGTAACCAACAAATTTGACTCCCAGGCTTTTCACACCATAGGGGTAGAGTTC
TTAAATCGAGATCTGGAGGTAGATGGACGCTTTGTAACCCTCCAGATCTGGGACACTGCA
GGGCAGGAACGTTTCAAGAGCCTTAGGACACCCTTCTACAGGGGAGCAGACTGCTGCCTC
TTGACCTTCAGCGTGGATGATCGGCAGAGCTTCGAGAATCTTGGTAACTGGCAGAAAGAA
TTTATTTACTATGCGGATGTGAAGGACCCTGAGCATTTCCCCTTTGTAGTTCTGGGTAAC
AAGGTAGACAAAGAGGATAGGCAAGTGACTACTGAGGAGGCACAAACCTGGTGCATGGAG
AATGGGGATTACCCTTATTTAGAAACTAGTGCCAAAGATGATACTAATGTGACAGTGGCC
TTTGAAGAAGCTGTCAGGCAGGTGCTGGCTGTAGAGGAACAGCTGGAGCATTGCATGTTG
GGTCACACCATTGACTTGAACAGTGGCTCCAAAGCAGGGTCTTCGTGCTGTGTTTAAACG
AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC
GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT
AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC
TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC
ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA
GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT
CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA
GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG
CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG
TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG
CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG
CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT
GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA
GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG
GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT
GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA
CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG
GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG
CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG
GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT
CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC
CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC
CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC
CCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAA
CGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGC
GTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTC
AAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAG
CTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCT
CCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTA
GGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGC
CTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGC
AGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTT
GAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCT
GAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC
TGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCA
AGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTA
AGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGG
AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC
AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA
TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT
TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT
TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG
CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA
ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC
TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC
CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT
GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC
CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC
CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT
TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT