Result of FASTA (omim) for pF1KB8759
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8759, 201 aa
  1>>>pF1KB8759 201 - 201 aa - 201 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.6154+/-0.000423; mu= 11.2099+/- 0.027
 mean_var=83.9469+/-16.949, 0's: 0 Z-trim(113.2): 422  B-trim: 1146 in 2/52
 Lambda= 0.139982
 statistics sampled from 21962 (22489) to 21962 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.651), E-opt: 0.2 (0.264), width:  16
 Scan time:  5.350

The best scores are:                                      opt bits E(85289)
NP_057454 (OMIM: 300285) ras-related protein Rab-9 ( 201) 1359 284.2 9.4e-77
XP_016885453 (OMIM: 300284) PREDICTED: ras-related ( 201) 1072 226.3 2.6e-59
NP_001182257 (OMIM: 300284) ras-related protein Ra ( 201) 1072 226.3 2.6e-59
NP_004242 (OMIM: 300284) ras-related protein Rab-9 ( 201) 1072 226.3 2.6e-59
NP_004628 (OMIM: 600882,602298) ras-related protei ( 207)  696 150.3   2e-36
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216)  444 99.5 4.2e-21
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218)  435 97.7 1.5e-20
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207)  428 96.2 3.8e-20
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207)  428 96.2 3.8e-20
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215)  423 95.2   8e-20
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203)  419 94.4 1.3e-19
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206)  418 94.2 1.5e-19
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215)  418 94.2 1.6e-19
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213)  413 93.2 3.2e-19
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201)  409 92.4 5.4e-19
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218)  409 92.4 5.7e-19
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205)  405 91.6 9.5e-19
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216)  405 91.6 9.9e-19
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256)  402 91.0 1.7e-18
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200)  400 90.6 1.9e-18
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203)  400 90.6 1.9e-18
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203)  400 90.6 1.9e-18
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203)  400 90.6 1.9e-18
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203)  400 90.6 1.9e-18
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228)  399 90.4 2.4e-18
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196)  397 89.9 2.8e-18
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223)  397 90.0 3.1e-18
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201)  393 89.1   5e-18
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213)  392 89.0 6.1e-18
NP_741995 (OMIM: 300774) ras-related protein Rab-3 ( 213)  392 89.0 6.1e-18
NP_001265595 (OMIM: 201000,606144) ras-related pro ( 237)  392 89.0 6.6e-18
NP_001265597 (OMIM: 201000,606144) ras-related pro ( 237)  392 89.0 6.6e-18
NP_057361 (OMIM: 201000,606144) ras-related protei ( 237)  392 89.0 6.6e-18
NP_899050 (OMIM: 201000,606144) ras-related protei ( 237)  392 89.0 6.6e-18
NP_001265596 (OMIM: 201000,606144) ras-related pro ( 237)  392 89.0 6.6e-18
NP_001294982 (OMIM: 605455) ras-related protein Ra ( 190)  390 88.5 7.3e-18
NP_003920 (OMIM: 603949) ras-related protein Rab-7 ( 203)  383 87.1 2.1e-17
XP_005245626 (OMIM: 603949) PREDICTED: ras-related ( 203)  383 87.1 2.1e-17
NP_001129134 (OMIM: 603949) ras-related protein Ra ( 203)  383 87.1 2.1e-17
XP_005245628 (OMIM: 603949) PREDICTED: ras-related ( 203)  383 87.1 2.1e-17
XP_005245627 (OMIM: 603949) PREDICTED: ras-related ( 203)  383 87.1 2.1e-17
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244)  384 87.4 2.1e-17
NP_001193765 (OMIM: 605570) ras-related protein Ra ( 155)  379 86.2 2.9e-17
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212)  373 85.1 8.6e-17
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216)  373 85.1 8.7e-17
NP_055814 (OMIM: 612398) ras-related protein Rab-2 ( 225)  369 84.3 1.6e-16
NP_006859 (OMIM: 605694) ras-related protein Rab-3 ( 195)  362 82.9 3.8e-16
NP_065724 (OMIM: 612966) ras-related protein Rab-2 ( 194)  361 82.7 4.3e-16
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225)  357 81.9 8.5e-16
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227)  357 81.9 8.5e-16


>>NP_057454 (OMIM: 300285) ras-related protein Rab-9B [H  (201 aa)
 initn: 1359 init1: 1359 opt: 1359  Z-score: 1498.9  bits: 284.2 E(85289): 9.4e-77
Smith-Waterman score: 1359; 100.0% identity (100.0% similar) in 201 aa overlap (1-201:1-201)

               10        20        30        40        50        60
pF1KB8 MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 WDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 WDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 VLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLE
              130       140       150       160       170       180

              190       200 
pF1KB8 HCMLGHTIDLNSGSKAGSSCC
       :::::::::::::::::::::
NP_057 HCMLGHTIDLNSGSKAGSSCC
              190       200 

>>XP_016885453 (OMIM: 300284) PREDICTED: ras-related pro  (201 aa)
 initn: 1072 init1: 1072 opt: 1072  Z-score: 1185.7  bits: 226.3 E(85289): 2.6e-59
Smith-Waterman score: 1072; 76.1% identity (91.5% similar) in 201 aa overlap (1-201:1-201)

               10        20        30        40        50        60
pF1KB8 MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQI
       :.::: :.:::::::::::::::::::::::::.: ::::::::::.::::::.:::.::
XP_016 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 WDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFV
       :::::::::.:::::::::.::::::::::: :::.::.::.::::::::::.:: ::::
XP_016 WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLE
       .::::.:  .:::.:::::.:: .::::::.:::::: :::..:::::::.:::.:.. .
XP_016 ILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD
              130       140       150       160       170       180

              190       200 
pF1KB8 HCMLGHTIDLNSGSKAGSSCC
       : .   :..:.   : .::::
XP_016 HLIQTDTVNLHRKPKPSSSCC
              190       200 

>>NP_001182257 (OMIM: 300284) ras-related protein Rab-9A  (201 aa)
 initn: 1072 init1: 1072 opt: 1072  Z-score: 1185.7  bits: 226.3 E(85289): 2.6e-59
Smith-Waterman score: 1072; 76.1% identity (91.5% similar) in 201 aa overlap (1-201:1-201)

               10        20        30        40        50        60
pF1KB8 MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQI
       :.::: :.:::::::::::::::::::::::::.: ::::::::::.::::::.:::.::
NP_001 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 WDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFV
       :::::::::.:::::::::.::::::::::: :::.::.::.::::::::::.:: ::::
NP_001 WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLE
       .::::.:  .:::.:::::.:: .::::::.:::::: :::..:::::::.:::.:.. .
NP_001 ILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD
              130       140       150       160       170       180

              190       200 
pF1KB8 HCMLGHTIDLNSGSKAGSSCC
       : .   :..:.   : .::::
NP_001 HLIQTDTVNLHRKPKPSSSCC
              190       200 

>>NP_004242 (OMIM: 300284) ras-related protein Rab-9A [H  (201 aa)
 initn: 1072 init1: 1072 opt: 1072  Z-score: 1185.7  bits: 226.3 E(85289): 2.6e-59
Smith-Waterman score: 1072; 76.1% identity (91.5% similar) in 201 aa overlap (1-201:1-201)

               10        20        30        40        50        60
pF1KB8 MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQI
       :.::: :.:::::::::::::::::::::::::.: ::::::::::.::::::.:::.::
NP_004 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 WDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFV
       :::::::::.:::::::::.::::::::::: :::.::.::.::::::::::.:: ::::
NP_004 WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLE
       .::::.:  .:::.:::::.:: .::::::.:::::: :::..:::::::.:::.:.. .
NP_004 ILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD
              130       140       150       160       170       180

              190       200 
pF1KB8 HCMLGHTIDLNSGSKAGSSCC
       : .   :..:.   : .::::
NP_004 HLIQTDTVNLHRKPKPSSSCC
              190       200 

>>NP_004628 (OMIM: 600882,602298) ras-related protein Ra  (207 aa)
 initn: 710 init1: 679 opt: 696  Z-score: 775.1  bits: 150.3 E(85289): 2e-36
Smith-Waterman score: 696; 52.2% identity (80.8% similar) in 203 aa overlap (2-201:3-205)

                10        20        30        40        50         
pF1KB8  MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQ
         : :..:::::.:::.::::.::::.::..::..:   :::..::.... :: :.::.:
NP_004 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB8 IWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPF
       ::::::::::.:: . ::::::::.:.:.:   ..:..: .:. ::.  :. .:::.:::
NP_004 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB8 VVLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQL
       ::::::.: :.:::.:..::.::. ... ::.:::::.  ::  ::.  .:..:  : ..
NP_004 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
              130       140       150       160       170       180

     180          190       200   
pF1KB8 E-HCMLGHTI--DLNSGSKAGSSCC  
       : .  . . :  : :. .::..  :  
NP_004 ELYNEFPEPIKLDKNDRAKASAESCSC
              190       200       

>>NP_004654 (OMIM: 605570) ras-related protein Rab-11A i  (216 aa)
 initn: 449 init1: 348 opt: 444  Z-score: 499.8  bits: 99.5 E(85289): 4.2e-21
Smith-Waterman score: 444; 40.5% identity (73.4% similar) in 173 aa overlap (7-178:11-178)

                   10        20        30        40        50      
pF1KB8     MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFV
                 :.::.:.::.:::::.:..:.. :.:. ..  :::::: .:...:::. .
NP_004 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
               10        20        30        40        50        60

         60        70        80        90       100       110      
pF1KB8 TLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEH
         ::::::::::.... . .::::   ::....  . ..::.  : ::.  .::     .
NP_004 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SN
               70        80        90       100       110          

        120        130       140       150       160       170     
pF1KB8 FPFVVLGNKVD-KEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAV
       . ....::: : .. : : :.::...  .::   ..:::: :.::: .::.  . ..  .
NP_004 IVIMLVGNKSDLRHLRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQTILTEIYRI
        120       130       140        150       160       170     

         180       190       200                
pF1KB8 EEQLEHCMLGHTIDLNSGSKAGSSCC               
         :                                      
NP_004 VSQKQMSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
         180       190       200       210      

>>NP_004209 (OMIM: 604198) ras-related protein Rab-11B [  (218 aa)
 initn: 420 init1: 348 opt: 435  Z-score: 489.9  bits: 97.7 E(85289): 1.5e-20
Smith-Waterman score: 435; 39.9% identity (73.4% similar) in 173 aa overlap (7-178:11-178)

                   10        20        30        40        50      
pF1KB8     MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFV
                 :.::.:.::.:::::.:..:.. :.:. ..  :::::: .:...:::. .
NP_004 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
               10        20        30        40        50        60

         60        70        80        90       100       110      
pF1KB8 TLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEH
         ::::::::::.... . .::::   ::....  . ..::.  : ::.  .::     .
NP_004 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SN
               70        80        90       100       110          

        120        130       140       150       160       170     
pF1KB8 FPFVVLGNKVD-KEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAV
       . ....::: : .. : : :.::...  .: .  ..:::: :.:::  ::.. . ..  .
NP_004 IVIMLVGNKSDLRHLRAVPTDEARAFAEKN-NLSFIETSALDSTNVEEAFKNILTEIYRI
        120       130       140        150       160       170     

         180       190       200                  
pF1KB8 EEQLEHCMLGHTIDLNSGSKAGSSCC                 
         :                                        
NP_004 VSQKQIADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQNL
         180       190       200       210        

>>NP_057614 (OMIM: 613532) ras-related protein Rab-8B [H  (207 aa)
 initn: 406 init1: 328 opt: 428  Z-score: 482.6  bits: 96.2 E(85289): 3.8e-20
Smith-Waterman score: 428; 40.5% identity (73.8% similar) in 168 aa overlap (7-173:8-170)

                10        20        30        40        50         
pF1KB8  MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQ
              :.:..:.::.::::. :. :.  . :..  . :::..:  : .:.::. . ::
NP_057 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB8 IWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPF
       ::::::::::... : .::::   .:.... ...::.:. :: ...  .:. .: :.   
NP_057 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS-SDVER---
               70        80        90       100       110          

     120       130        140       150       160       170        
pF1KB8 VVLGNKVDKED-RQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ
       ..:::: : .: :::. :...   .. :   .::::::...::  ::   .:...     
NP_057 MILGNKCDMNDKRQVSKERGEKLAIDYG-IKFLETSAKSSANVEEAFFTLARDIMTKLNR
        120       130       140        150       160       170     

      180       190       200          
pF1KB8 LEHCMLGHTIDLNSGSKAGSSCC         
                                       
NP_057 KMNDSNSAGAGGPVKITENRSKKTSFFRCSLL
         180       190       200       

>>NP_005361 (OMIM: 165040) ras-related protein Rab-8A [H  (207 aa)
 initn: 402 init1: 327 opt: 428  Z-score: 482.6  bits: 96.2 E(85289): 3.8e-20
Smith-Waterman score: 428; 39.8% identity (72.7% similar) in 176 aa overlap (7-180:8-178)

                10        20        30        40        50         
pF1KB8  MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQ
              :.:..:.::.::::. .. :.  . :.:  . :::..:  : .:.::. . ::
NP_005 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB8 IWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPF
       ::::::::::... : .::::   .:.... ...::.:. :: ...  .:.. : :.   
NP_005 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA-DVEK---
               70        80        90       100       110          

     120       130        140       150       160       170        
pF1KB8 VVLGNKVDKED-RQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLA-VEE
       ..:::: : .: :::. :...   .. :   ..::::: . ::  ::   .:.. : ...
NP_005 MILGNKCDVNDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLARDIKAKMDK
        120       130       140        150       160       170     

       180       190       200         
pF1KB8 QLEHCMLGHTIDLNSGSKAGSSCC        
       .::                             
NP_005 KLEGNSPQGSNQGVKITPDQQKRSSFFRCVLL
         180       190       200       

>>XP_011526322 (OMIM: 165040) PREDICTED: ras-related pro  (215 aa)
 initn: 401 init1: 326 opt: 423  Z-score: 476.9  bits: 95.2 E(85289): 8e-20
Smith-Waterman score: 423; 40.2% identity (72.2% similar) in 169 aa overlap (7-174:8-171)

                10        20        30        40        50         
pF1KB8  MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQ
              :.:..:.::.::::. .. :.  . :.:  . :::..:  : .:.::. . ::
XP_011 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB8 IWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPF
       ::::::::::... : .::::   .:.... ...::.:. :: ...  .:.. : :.   
XP_011 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA-DVEK---
               70        80        90       100       110          

     120       130        140       150       160       170        
pF1KB8 VVLGNKVDKED-RQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ
       ..:::: : .: :::. :...   .. :   ..::::: . ::  ::   .:.. :    
XP_011 MILGNKCDVNDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLARDIKAKMDK
        120       130       140        150       160       170     

      180       190       200                  
pF1KB8 LEHCMLGHTIDLNSGSKAGSSCC                 
                                               
XP_011 KLGQKDNMVCKDREPWLGEKLPRSLGQGQGWCLITAGSSS
         180       190       200       210     




201 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 15:20:40 2016 done: Fri Nov  4 15:20:41 2016
 Total Scan time:  5.350 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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