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SpecieshumanProduct IDFXC01297Cloning SiteSgfI-PmeIGeneKIBB3481SymbolERCC3
Alias : BTF2, GTF2H, RAD25, Ssl2, TFIIH, TTD2, XPBDescriptionexcision repair cross-complementation group 3, transcript variant 1Original Clone IDha03327
Length: 2346 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 782 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS2144.1 0 100.0 ERCC3
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR001161 74 94 PR00851 Xeroderma pigmentosum group B protein (XP-B) IPR001161 160 179 PR00851 Xeroderma pigmentosum group B protein (XP-B) IPR001161 297 323 PR00851 Xeroderma pigmentosum group B protein (XP-B) IPR001161 328 350 PR00851 Xeroderma pigmentosum group B protein (XP-B) IPR001161 434 454 PR00851 Xeroderma pigmentosum group B protein (XP-B) IPR001161 500 522 PR00851 Xeroderma pigmentosum group B protein (XP-B) IPR001161 537 552 PR00851 Xeroderma pigmentosum group B protein (XP-B) IPR001161 556 578 PR00851 Xeroderma pigmentosum group B protein (XP-B) IPR001161 603 621 PR00851 Xeroderma pigmentosum group B protein (XP-B) IPR001161 622 647 PR00851 Xeroderma pigmentosum group B protein (XP-B) IPR001161 653 676 PR00851 Xeroderma pigmentosum group B protein (XP-B) IPR001161 742 761 PR00851 Xeroderma pigmentosum group B protein (XP-B) HMMPfam IPR006935 316 470 PF04851 UvrABC complex IPR001650 579 647 PF00271 Helicase HMMSmart IPR014001 312 492 SM00487 DEAD-like helicase IPR001650 569 647 SM00490 Helicase HMMTigr IPR001161 60 779 TIGR00603 Xeroderma pigmentosum group B protein (XP-B) ProfileScan IPR014001 327 488 PS51192 DEAD-like helicase IPR001650 542 702 PS51194 Helicase
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_000113 782 133510,610651,616390 100.0 100.0 XP_011509096 788 133510,610651,616390 99.2 100.0 NP_001290345 718 133510,610651,616390 100.0 91.8 NP_001290347 718 133510,610651,616390 100.0 91.8 XP_016859072 630 133510,610651,616390 100.0 80.6 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB3481 Download>KIBB3481 2346 bp ATGGGCAAAAGAGACCGAGCGGACCGCGACAAGAAGAAATCCAGGAAGCGGCACTATGAG GATGAAGAGGATGATGAAGAGGACGCCCCGGGGAACGACCCTCAGGAAGCGGTTCCCTCG GCGGCGGGGAAGCAGGTGGATGAGTCAGGCACCAAAGTGGATGAATATGGAGCCAAGGAC TACAGGCTGCAAATGCCGCTGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGGCTCCC GATGGCCATATCTTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCCCAAGACTTCTTG GTGGCTATTGCAGAGCCAGTGTGCCGACCAACCCATGTGCATGAGTACAAACTAACTGCC TACTCCTTGTATGCAGCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACCGAGTACCTC AGGAAGCTCAGCAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTGTACT GTCAGCTATGGAAAAGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGAAAGTTGC CACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGA AACTCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCCATT TCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGGT AAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAA GAAGAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGAACTC CAGAAACGTTGCATCCACCTGGAGTACCCTCTGTTGGCAGAATATGACTTCCGGAATGAT TCTGTCAACCCTGATATCAACATTGACCTAAAGCCCACAGCTGTCCTCAGACCCTATCAG GAGAAGAGCTTGCGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTT CCCTGCGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAACGC TGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATG TGGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCC ATCGGCTGCTCCGTTGCCATTAGCACCTACTCCATGCTGGGCCACACCACCAAAAGGTCC TGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTG GATGAAGTGCACACCATACCAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCC CACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTA AATTTTCTGATTGGGCCTAAGCTCTACGAAGCCAACTGGATGGAGCTGCAGAATAATGGC TACATCGCCAAAGTCCAGTGTGCTGAGGTCTGGTGCCCTATGTCTCCTGAATTTTACCGG GAATATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAA TTTAGAGCTTGCCAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGACAAGATTATTGTC TTTGCTGACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATATC TACGGACCTACGTCTCAGGGGGAAAGGATGCAAATTCTCCAGAATTTCAAGCACAACCCC AAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCA AATGTCCTCATTCAGATCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCTA GGGCGGGTGCTTCGAGCTAAAAAAGGGATGGTTGCAGAAGAGTACAATGCCTTTTTCTAC TCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTG GTAGATCAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGAC TTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACAGAAAGTCCTGGCAGCCACT GACCTGGATGCCGAGGAGGAGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCA TCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAG TACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTT AGGAAA
Cloned ORF protein sequence for pF1KB3481 Download>KIBB3481 782 aa MGKRDRADRDKKKSRKRHYEDEEDDEEDAPGNDPQEAVPSAAGKQVDESGTKVDEYGAKD YRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVESC HPDVIQHLLQDPVIRECRLRNSEGEATELITETFTSKSAISKTAESSGGPSTSRVTDPQG KSDIPMDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND SVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRS WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAAT DLDAEEEVVAGEFGSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRF RK
Nucleotide Sequence (with vector) for pF1KB3481 Download>pF1KB3481 5459 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGGCAAAAGA GACCGAGCGGACCGCGACAAGAAGAAATCCAGGAAGCGGCACTATGAGGATGAAGAGGAT GATGAAGAGGACGCCCCGGGGAACGACCCTCAGGAAGCGGTTCCCTCGGCGGCGGGGAAG CAGGTGGATGAGTCAGGCACCAAAGTGGATGAATATGGAGCCAAGGACTACAGGCTGCAA ATGCCGCTGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGGCTCCCGATGGCCATATC TTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCCCAAGACTTCTTGGTGGCTATTGCA GAGCCAGTGTGCCGACCAACCCATGTGCATGAGTACAAACTAACTGCCTACTCCTTGTAT GCAGCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACCGAGTACCTCAGGAAGCTCAGC AAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTGTACTGTCAGCTATGGA AAAGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGAAAGTTGCCACCCTGATGTA ATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGGG GAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCCATTTCTAAGACTGCT GAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGGTAAATCTGACATC CCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAAGAAGAG ACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGAACTCCAGAAACGTTGC ATCCACCTGGAGTACCCTCTGTTGGCAGAATATGACTTCCGGAATGATTCTGTCAACCCT GATATCAACATTGACCTAAAGCCCACAGCTGTCCTCAGACCCTATCAGGAGAAGAGCTTG CGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGCT GGAAAGTCCCTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAACGCTGTCTGGTGCTG GGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCATT GACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTCC GTTGCCATTAGCACCTACTCCATGCTGGGCCACACCACCAAAAGGTCCTGGGAGGCCGAG CGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCAC ACCATACCAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCTG GGTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGATT GGGCCTAAGCTCTACGAAGCCAACTGGATGGAGCTGCAGAATAATGGCTACATCGCCAAA GTCCAGTGTGCTGAGGTCTGGTGCCCTATGTCTCCTGAATTTTACCGGGAATATGTGGCA ATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGC CAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGACAAGATTATTGTCTTTGCTGACAAT GTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATATCTACGGACCTACG TCTCAGGGGGAAAGGATGCAAATTCTCCAGAATTTCAAGCACAACCCCAAAATTAACACC ATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAATGTCCTCATT CAGATCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCTAGGGCGGGTGCTT CGAGCTAAAAAAGGGATGGTTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCC CAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGT TATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGACTTGGCGTTTTCG ACAAAAGAAGAGCAACAGCAGCTCTTACAGAAAGTCCTGGCAGCCACTGACCTGGATGCC GAGGAGGAGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTT GGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCG CGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAAGTTTAA ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGA CGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGA TAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGC CGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACG CTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGG AAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTT TCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGT GTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTG CGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACT GGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTT CTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCT GCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCAC CGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATT TCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACG TTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTC CGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAAT GGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTAT TCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCAT TTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGG GATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTC CGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATC AGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCC ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC TCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAG ACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATC CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCC CGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTG CGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT
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