TAAR6 ORF clone FXC11302

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Flexi ORF Clone FXC11302

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Clone info.

Species

human

Clone Name

pF1KE0840 Sequence (with vector) Restriction Map

Product ID

FXC11302

HaloTag Clone PID

FHC11302

ORF Sequence

DNA sequence (1035 bp)
Protein sequence (345 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529264]

Gene

KIEE0840

Symbol

TAAR6

Alias : TA4, TAR4, TAR6, TRAR4, taR-4, taR-6

Description

trace amine associated receptor 6

Original Clone ID

cp01240

Features of the cloned ORF sequence

Description

Length: 1035 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 345 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5155.1 1.9e-91 100.0 TAAR6 CCDS5154.1 2.7e-73 79.6 TAAR8 CCDS75520.1 2.2e-65 69.0 TAAR9 CCDS5156.1 9.4e-38 43.8 TAAR5 CCDS5158.1 2.9e-34 41.1 TAAR1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 34 58 PR00237 GPCR IPR009132 56 66 PR01830 Trace amine receptor IPR000276 67 88 PR00237 GPCR IPR009132 89 101 PR01830 Trace amine receptor IPR000276 112 134 PR00237 GPCR IPR000276 198 221 PR00237 GPCR IPR000276 256 280 PR00237 GPCR IPR009132 281 294 PR01830 Trace amine receptor IPR000276 293 319 PR00237 GPCR HMMPfam IPR000276 49 311 PF00001 GPCR ProfileScan IPR017452 49 311 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MSSNSSLLVAVQLCYANVNGSCV 23 SECONDARY 23 2 33 VILYIVFGFGAVLAVFGNLLVMI 55 PRIMARY 23 3 68 NFLVASLACADFLVGVTVMPFSM 90 SECONDARY 23 4 112 DVAFCYSSLFHLCFISIDRYIAV 134 SECONDARY 23 5 148 VSGICISVSWILPLMYSGAVFYT 170 PRIMARY 23 6 202 DFLSFFIPTFIMIILYGNIFLVA 224 PRIMARY 23 7 256 AAKTLGVTVVAFMISWLPYSIDS 278 PRIMARY 23 8 280 IDAFMGFITPACIYEICCWCAYY 302 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_778237 345 608923 100.0 100.0 NP_444508 342 606927 79.6 99.4 NP_778227 348 608282 69.0 100.0 NP_003958 337 607405 43.8 95.9 NP_612200 339 609333 41.1 95.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0840 Download

>KIEE0840  1035 bp
ATGAGCAGCAATTCATCCCTGCTGGTGGCTGTGCAGCTGTGCTACGCGAACGTGAATGGG
TCCTGTGTGAAAATCCCCTTCTCGCCGGGATCCCGGGTGATTCTGTACATAGTGTTTGGC
TTTGGGGCTGTGCTGGCTGTGTTTGGAAACCTCCTGGTGATGATTTCAATCCTCCATTTC
AAGCAGCTGCACTCTCCGACCAATTTTCTCGTTGCCTCTCTGGCCTGCGCTGATTTCTTG
GTGGGTGTGACTGTGATGCCCTTCAGCATGGTCAGGACGGTGGAGAGCTGCTGGTATTTT
GGGAGGAGTTTTTGTACTTTCCACACCTGCTGTGATGTGGCATTTTGTTACTCTTCTCTC
TTTCACTTGTGCTTCATCTCCATCGACAGGTACATTGCGGTTACTGACCCCCTGGTCTAT
CCTACCAAGTTCACCGTATCTGTGTCAGGAATTTGCATCAGCGTGTCCTGGATCCTGCCC
CTCATGTACAGCGGTGCTGTGTTCTACACAGGTGTCTATGACGATGGGCTGGAGGAATTA
TCTGATGCCCTAAACTGTATAGGAGGTTGTCAGACCGTTGTAAATCAAAACTGGGTGTTG
ACAGATTTTCTATCCTTCTTTATACCTACCTTTATTATGATAATTCTGTATGGTAACATA
TTTCTTGTGGCTAGACGACAGGCGAAAAAGATAGAAAATACTGGTAGCAAGACAGAATCA
TCCTCAGAGAGTTACAAAGCCAGAGTGGCCAGGAGAGAGAGAAAAGCAGCTAAAACCCTG
GGGGTCACAGTGGTAGCATTTATGATTTCATGGTTACCATATAGCATTGATTCATTAATT
GATGCCTTTATGGGCTTTATAACCCCTGCCTGTATTTATGAGATTTGCTGTTGGTGTGCT
TATTATAACTCAGCCATGAATCCTTTGATTTATGCTTTATTTTACCCATGGTTTAGGAAA
GCAATAAAAGTTATTGTAACTGGTCAGGTTTTAAAGAACAGTTCAGCAACCATGAATTTG
TTTTCTGAACATATA

ORF Protein

Cloned ORF protein sequence for pF1KE0840 Download

>KIEE0840  345 aa
MSSNSSLLVAVQLCYANVNGSCVKIPFSPGSRVILYIVFGFGAVLAVFGNLLVMISILHF
KQLHSPTNFLVASLACADFLVGVTVMPFSMVRTVESCWYFGRSFCTFHTCCDVAFCYSSL
FHLCFISIDRYIAVTDPLVYPTKFTVSVSGICISVSWILPLMYSGAVFYTGVYDDGLEEL
SDALNCIGGCQTVVNQNWVLTDFLSFFIPTFIMIILYGNIFLVARRQAKKIENTGSKTES
SSESYKARVARRERKAAKTLGVTVVAFMISWLPYSIDSLIDAFMGFITPACIYEICCWCA
YYNSAMNPLIYALFYPWFRKAIKVIVTGQVLKNSSATMNLFSEHI

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0840 Download

>pF1KE0840  4148 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGCAGCAAT
TCATCCCTGCTGGTGGCTGTGCAGCTGTGCTACGCGAACGTGAATGGGTCCTGTGTGAAA
ATCCCCTTCTCGCCGGGATCCCGGGTGATTCTGTACATAGTGTTTGGCTTTGGGGCTGTG
CTGGCTGTGTTTGGAAACCTCCTGGTGATGATTTCAATCCTCCATTTCAAGCAGCTGCAC
TCTCCGACCAATTTTCTCGTTGCCTCTCTGGCCTGCGCTGATTTCTTGGTGGGTGTGACT
GTGATGCCCTTCAGCATGGTCAGGACGGTGGAGAGCTGCTGGTATTTTGGGAGGAGTTTT
TGTACTTTCCACACCTGCTGTGATGTGGCATTTTGTTACTCTTCTCTCTTTCACTTGTGC
TTCATCTCCATCGACAGGTACATTGCGGTTACTGACCCCCTGGTCTATCCTACCAAGTTC
ACCGTATCTGTGTCAGGAATTTGCATCAGCGTGTCCTGGATCCTGCCCCTCATGTACAGC
GGTGCTGTGTTCTACACAGGTGTCTATGACGATGGGCTGGAGGAATTATCTGATGCCCTA
AACTGTATAGGAGGTTGTCAGACCGTTGTAAATCAAAACTGGGTGTTGACAGATTTTCTA
TCCTTCTTTATACCTACCTTTATTATGATAATTCTGTATGGTAACATATTTCTTGTGGCT
AGACGACAGGCGAAAAAGATAGAAAATACTGGTAGCAAGACAGAATCATCCTCAGAGAGT
TACAAAGCCAGAGTGGCCAGGAGAGAGAGAAAAGCAGCTAAAACCCTGGGGGTCACAGTG
GTAGCATTTATGATTTCATGGTTACCATATAGCATTGATTCATTAATTGATGCCTTTATG
GGCTTTATAACCCCTGCCTGTATTTATGAGATTTGCTGTTGGTGTGCTTATTATAACTCA
GCCATGAATCCTTTGATTTATGCTTTATTTTACCCATGGTTTAGGAAAGCAATAAAAGTT
ATTGTAACTGGTCAGGTTTTAAAGAACAGTTCAGCAACCATGAATTTGTTTTCTGAACAT
ATAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGA
ATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCG
TAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAA
AAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTT
TCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCT
GTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCT
CAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCC
CGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTT
ATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGC
TACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT
CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAA
ACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAA
AAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGA
AAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCT
TTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT