RBSN ORF clone FXC03746

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Flexi ORF Clone FXC03746

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Clone info.

Species

human

Clone Name

pF1KB5709 Sequence (with vector) Restriction Map

Product ID

FXC03746

HaloTag Clone PID

FHC03746

ORF Sequence

DNA sequence (2352 bp)
Protein sequence (784 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527819]

Gene

KIBB5709

Symbol

RBSN

Alias : Rabenosyn-5, ZFYVE20

Description

rabenosyn, RAB effector, transcript variant 1

Original Clone ID

cs01704

Features of the cloned ORF sequence

Description

Length: 2352 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 784 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS2623.1 4.5e-168 100.0 RBSN The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000306 153 259 PF01363 Zinc finger IPR021565 459 500 PF11464 FYVE-finger-containing Rab5 effector protein rabenosyn-5 IPR021565 739 780 PF11464 FYVE-finger-containing Rab5 effector protein rabenosyn-5 HMMSmart IPR000306 149 261 SM00064 Zinc finger ProfileScan IPR007087 14 42 PS50157 Zinc finger IPR017455 157 260 PS50178 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016862512 784 609511 100.0 100.0 NP_071735 784 609511 100.0 100.0 XP_005265442 784 609511 100.0 100.0 NP_001289307 784 609511 100.0 100.0 XP_005265441 784 609511 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5709 Download

>KIBB5709  2352 bp
ATGGCTTCTCTGGACGACCCAGGGGAAGTGAGGGAGGGCTTCCTCTGCCCTCTGTGCCTG
AAGGATCTGCAGTCTTTCTATCAGCTTCACTCACATTACGAGGAAGAACACTCAGGGGAA
GACCGTGATGTCAAAGGGCAAATTAAAAGTCTTGTCCAGAAGGCTAAAAAAGCAAAGGAC
AGGTTGTTGAAACGAGAAGGGGATGATCGAGCAGAGTCAGGGACCCAAGGATATGAGTCT
TTCAGCTATGGAGGGGTTGATCCTTACATGTGGGAACCCCAGGAGCTTGGTGCTGTGAGA
AGCCATCTTTCCGACTTCAAAAAACACCGAGCTGCTAGAATTGACCACTATGTTGTGGAA
GTCAATAAACTAATAATCAGGTTAGAGAAGCTCACTGCATTTGACAGAACAAATACTGAG
TCTGCAAAGATTCGAGCAATAGAAAAGTCTGTGGTGCCTTGGGTCAACGACCAGGATGTC
CCTTTCTGTCCAGACTGTGGGAATAAGTTCAGCATCCGGAACCGCCGCCACCACTGCCGC
CTCTGCGGGTCTATTATGTGCAAGAAGTGTATGGAGCTCATCAGCCTTCCCTTGGCAAAC
AAGCTCACCAGTGCCAGCAAGGAGTCCCTGAGCACCCACACCAGCCCCAGCCAGTCACCC
AACAGTGTCCATGGCTCCCGCCGAGGCAGCATCAGCAGCATGAGCAGTGTCAGCTCGGTC
CTGGATGAGAAGGACGATGACCGGATCCGCTGCTGTACACACTGCAAGGACACGCTGCTC
AAGAGAGAGCAGCAGATTGATGAGAAGGAGCACACACCTGACATCGTGAAGCTCTACGAG
AAATTACGACTTTGCATGGAGAAAGTTGACCAGAAAGCTCCAGAATACATCAGGATGGCA
GCATCATTAAATGCTGGGGAGACAACCTACAGTCTGGAACATGCCAGTGACCTTCGAGTG
GAAGTGCAGAAAGTGTATGAGCTGATAGACGCTTTAAGTAAGAAGATCTTAACCTTGGGC
TTGAACCAGGACCCTCCACCACATCCAAGCAATTTGCGGCTGCAGAGAATGATCAGATAC
TCAGCTACACTTTTTGTGCAGGAAAAGTTGCTTGGTTTGATGTCACTGCCAACCAAAGAA
CAGTTTGAGGAACTGAAAAAGAAAAGGAAGGAGGAAATGGAGAGGAAGAGGGCCGTGGAG
AGACAAGCTGCCCTGGAGTCCCAGCGAAGGCTTGAGGAAAGGCAGAGTGGCCTGGCTTCT
CGAGCGGCCAACGGGGAGGTGGCATCTCTCCGCAGGGGCCCTGCCCCCTTGAGAAAGGCT
GAGGGCTGGCTCCCACTGTCAGGAGGTCAGGGGCAGAGTGAGGACTCAGACCCGCTCCTC
CAGCAGATCCACAACATCACATCATTCATCAGGCAGGCCAAGGCCGCGGGCCGCATGGAT
GAAGTGCGCACTCTGCAGGAGAACCTGCGGCAGCTGCAGGACGAGTATGACCAGCAGCAG
ACAGAGAAGGCCATCGAGCTGTCCCGGAGGCAGGCTGAGGAGGAGGACCTGCAGCGGGAA
CAGCTGCAGATGTTGCGTGAACGGGAGTTGGAACGAGAAAGGGAGCAGTTTCGGGTGGCA
TCCCTGCACACACGGACTCGGTCCCTGGACTTCAGAGAAATCGGCCCTTTTCAGCTGGAG
CCCAGCAGAGAGCCTCGCACCCACCTTGCTTATGCTTTGGATCTAGGCTCTTCCCCAGTT
CCAAGCAGCACAGCTCCCAAGACCCCTTCACTTAGCTCAACTCAACCCACCAGAGTGTGG
TCTGGGCCCCCAGCCGTTGGCCAGGAGCGCTTACCCCAGAGCAGCATGCCACAGCAACAT
GAGGGGCCCTCCTTAAACCCCTTTGATGAGGAAGACCTCTCCAGCCCCATGGAAGAGGCC
ACTACTGGTCCTCCTGCTGCAGGGGTTTCCTTAGACCCTTCAGCCCGCATCCTGAAAGAG
TACAATCCTTTCGAGGAAGAGGACGAGGAGGAGGAAGCAGTGGCAGGGAATCCATTCATT
CAGCCAGACAGCCCAGCTCCTAACCCCTTCAGTGAGGAAGACGAACATCCCCAGCAGAGG
CTCTCAAGCCCTCTGGTTCCTGGTAACCCCTTTGAGGAACCCACCTGTATCAACCCCTTT
GAGATGGACAGTGACAGTGGGCCAGAGGCTGAGGAGCCCATAGAGGAAGAGCTCCTCCTG
CAGCAGATCGATAACATCAAGGCATACATCTTTGATGCCAAGCAGTGCGGCCGCCTGGAT
GAGGTAGAGGTGCTGACAGAGAATCTGCGGGAGCTGAAGCACACCCTGGCCAAGCAGAAG
GGGGGCACTGAC

ORF Protein

Cloned ORF protein sequence for pF1KB5709 Download

>KIBB5709  784 aa
MASLDDPGEVREGFLCPLCLKDLQSFYQLHSHYEEEHSGEDRDVKGQIKSLVQKAKKAKD
RLLKREGDDRAESGTQGYESFSYGGVDPYMWEPQELGAVRSHLSDFKKHRAARIDHYVVE
VNKLIIRLEKLTAFDRTNTESAKIRAIEKSVVPWVNDQDVPFCPDCGNKFSIRNRRHHCR
LCGSIMCKKCMELISLPLANKLTSASKESLSTHTSPSQSPNSVHGSRRGSISSMSSVSSV
LDEKDDDRIRCCTHCKDTLLKREQQIDEKEHTPDIVKLYEKLRLCMEKVDQKAPEYIRMA
ASLNAGETTYSLEHASDLRVEVQKVYELIDALSKKILTLGLNQDPPPHPSNLRLQRMIRY
SATLFVQEKLLGLMSLPTKEQFEELKKKRKEEMERKRAVERQAALESQRRLEERQSGLAS
RAANGEVASLRRGPAPLRKAEGWLPLSGGQGQSEDSDPLLQQIHNITSFIRQAKAAGRMD
EVRTLQENLRQLQDEYDQQQTEKAIELSRRQAEEEDLQREQLQMLRERELEREREQFRVA
SLHTRTRSLDFREIGPFQLEPSREPRTHLAYALDLGSSPVPSSTAPKTPSLSSTQPTRVW
SGPPAVGQERLPQSSMPQQHEGPSLNPFDEEDLSSPMEEATTGPPAAGVSLDPSARILKE
YNPFEEEDEEEEAVAGNPFIQPDSPAPNPFSEEDEHPQQRLSSPLVPGNPFEEPTCINPF
EMDSDSGPEAEEPIEEELLLQQIDNIKAYIFDAKQCGRLDEVEVLTENLRELKHTLAKQK
GGTD

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5709 Download

>pF1KB5709  5465 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCTTCTCTG
GACGACCCAGGGGAAGTGAGGGAGGGCTTCCTCTGCCCTCTGTGCCTGAAGGATCTGCAG
TCTTTCTATCAGCTTCACTCACATTACGAGGAAGAACACTCAGGGGAAGACCGTGATGTC
AAAGGGCAAATTAAAAGTCTTGTCCAGAAGGCTAAAAAAGCAAAGGACAGGTTGTTGAAA
CGAGAAGGGGATGATCGAGCAGAGTCAGGGACCCAAGGATATGAGTCTTTCAGCTATGGA
GGGGTTGATCCTTACATGTGGGAACCCCAGGAGCTTGGTGCTGTGAGAAGCCATCTTTCC
GACTTCAAAAAACACCGAGCTGCTAGAATTGACCACTATGTTGTGGAAGTCAATAAACTA
ATAATCAGGTTAGAGAAGCTCACTGCATTTGACAGAACAAATACTGAGTCTGCAAAGATT
CGAGCAATAGAAAAGTCTGTGGTGCCTTGGGTCAACGACCAGGATGTCCCTTTCTGTCCA
GACTGTGGGAATAAGTTCAGCATCCGGAACCGCCGCCACCACTGCCGCCTCTGCGGGTCT
ATTATGTGCAAGAAGTGTATGGAGCTCATCAGCCTTCCCTTGGCAAACAAGCTCACCAGT
GCCAGCAAGGAGTCCCTGAGCACCCACACCAGCCCCAGCCAGTCACCCAACAGTGTCCAT
GGCTCCCGCCGAGGCAGCATCAGCAGCATGAGCAGTGTCAGCTCGGTCCTGGATGAGAAG
GACGATGACCGGATCCGCTGCTGTACACACTGCAAGGACACGCTGCTCAAGAGAGAGCAG
CAGATTGATGAGAAGGAGCACACACCTGACATCGTGAAGCTCTACGAGAAATTACGACTT
TGCATGGAGAAAGTTGACCAGAAAGCTCCAGAATACATCAGGATGGCAGCATCATTAAAT
GCTGGGGAGACAACCTACAGTCTGGAACATGCCAGTGACCTTCGAGTGGAAGTGCAGAAA
GTGTATGAGCTGATAGACGCTTTAAGTAAGAAGATCTTAACCTTGGGCTTGAACCAGGAC
CCTCCACCACATCCAAGCAATTTGCGGCTGCAGAGAATGATCAGATACTCAGCTACACTT
TTTGTGCAGGAAAAGTTGCTTGGTTTGATGTCACTGCCAACCAAAGAACAGTTTGAGGAA
CTGAAAAAGAAAAGGAAGGAGGAAATGGAGAGGAAGAGGGCCGTGGAGAGACAAGCTGCC
CTGGAGTCCCAGCGAAGGCTTGAGGAAAGGCAGAGTGGCCTGGCTTCTCGAGCGGCCAAC
GGGGAGGTGGCATCTCTCCGCAGGGGCCCTGCCCCCTTGAGAAAGGCTGAGGGCTGGCTC
CCACTGTCAGGAGGTCAGGGGCAGAGTGAGGACTCAGACCCGCTCCTCCAGCAGATCCAC
AACATCACATCATTCATCAGGCAGGCCAAGGCCGCGGGCCGCATGGATGAAGTGCGCACT
CTGCAGGAGAACCTGCGGCAGCTGCAGGACGAGTATGACCAGCAGCAGACAGAGAAGGCC
ATCGAGCTGTCCCGGAGGCAGGCTGAGGAGGAGGACCTGCAGCGGGAACAGCTGCAGATG
TTGCGTGAACGGGAGTTGGAACGAGAAAGGGAGCAGTTTCGGGTGGCATCCCTGCACACA
CGGACTCGGTCCCTGGACTTCAGAGAAATCGGCCCTTTTCAGCTGGAGCCCAGCAGAGAG
CCTCGCACCCACCTTGCTTATGCTTTGGATCTAGGCTCTTCCCCAGTTCCAAGCAGCACA
GCTCCCAAGACCCCTTCACTTAGCTCAACTCAACCCACCAGAGTGTGGTCTGGGCCCCCA
GCCGTTGGCCAGGAGCGCTTACCCCAGAGCAGCATGCCACAGCAACATGAGGGGCCCTCC
TTAAACCCCTTTGATGAGGAAGACCTCTCCAGCCCCATGGAAGAGGCCACTACTGGTCCT
CCTGCTGCAGGGGTTTCCTTAGACCCTTCAGCCCGCATCCTGAAAGAGTACAATCCTTTC
GAGGAAGAGGACGAGGAGGAGGAAGCAGTGGCAGGGAATCCATTCATTCAGCCAGACAGC
CCAGCTCCTAACCCCTTCAGTGAGGAAGACGAACATCCCCAGCAGAGGCTCTCAAGCCCT
CTGGTTCCTGGTAACCCCTTTGAGGAACCCACCTGTATCAACCCCTTTGAGATGGACAGT
GACAGTGGGCCAGAGGCTGAGGAGCCCATAGAGGAAGAGCTCCTCCTGCAGCAGATCGAT
AACATCAAGGCATACATCTTTGATGCCAAGCAGTGCGGCCGCCTGGATGAGGTAGAGGTG
CTGACAGAGAATCTGCGGGAGCTGAAGCACACCCTGGCCAAGCAGAAGGGGGGCACTGAC
GTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCA
AGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGA
GCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAA
AGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCA
TGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGAT
AGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGT
GTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAA
GAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATG
GCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGA
TGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGG
GTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCC
GTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGT
GCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTT
CCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGC
GAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATC
ATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCAC
CAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAG
GATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAG
GCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAAT
ATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCG
GACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAA
TGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCC
TTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACC
AAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATC
AGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAA
AAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAA
TCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCC
CCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTC
CGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAG
TTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGA
CCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATC
GCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTAC
AGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTG
CGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACA
AACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAA
AGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAA
CTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTT
ATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATG
AAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCAT
AGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGT
TGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAA
TTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCA
GTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGAT
TAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGT
GGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGT
GGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGT
CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGA
CAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAG
GACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCC
TTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCAT