OR2A20P ORF clone FXC02248

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Flexi ORF Clone FXC02248

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Clone info.

Species

human

Clone Name

pF1KB7097 Sequence (with vector) Restriction Map

Product ID

FXC02248

HaloTag Clone PID

FHC02248

ORF Sequence

DNA sequence (582 bp)
Protein sequence (194 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464440]

Gene

KIBB7097

Symbol

OR2A20P

Alias : OR2A20

Description

olfactory receptor, family 2, subfamily A, member 20 pseudogene

Original Clone ID

cp01102

Features of the cloned ORF sequence

Description

Length: 582 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 194 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS56515.1 2.5e-64 89.7 OR2A42 CCDS43673.1 2.5e-64 89.7 OR2A1 CCDS43668.1 2.6e-61 86.4 OR2A5 CCDS43672.1 2.1e-58 83.8 OR2A14 CCDS43670.1 3.7e-54 76.4 OR2A12 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000725 12 24 PR00245 Olfactory receptor IPR000725 59 75 PR00245 Olfactory receptor IPR000725 119 128 PR00245 Olfactory receptor IPR000725 166 177 PR00245 Olfactory receptor HMMPfam IPR000276 1 173 PF00001 GPCR ProfileScan IPR017452 1 173 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 22 KVCITLAITSWTCGSLLAMVHVS 44 PRIMARY 23 2 84 AACMFILVGPLCLVLVSYSHILA 106 PRIMARY 23 3 123 TCSSHLCVVGLFFGSAIVMYMA 144 PRIMARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003691 308 608494 54.3 95.9 NP_036501 317 608497 50.0 99.0 XP_011514322 317 608497 50.0 99.0 XP_011514321 317 608497 50.0 99.0 NP_009091 312 600578 49.2 98.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7097 Download

>KIBB7097  582 bp
ATGTCCTACGATCGGTACGTGGCCATCTGCCACCCTCTCCGATATTTCATCATCATGACC
TGGAAAGTCTGCATCACTCTGGCCATCACTTCCTGGACATGTGGCTCCCTCCTGGCTATG
GTCCATGTGAGCCTCATCCTAAGACTGCCCTTTTGTGGGCCTCGTGAAATCAACCACTTC
TTCTGTGAAATCCTGTCTGTCCTCAGGCTGGCCTGTGCTGATACCTGGCTCAACCAGGTG
GTCATCTTTGCAGCCTGCATGTTCATCCTGGTGGGACCACTCTGCCTGGTGCTGGTCTCC
TACTCACACATCCTGGCGGCCATCCTGAGGATCCAGTCTGGGGAGGGCCGCAGAAAGGCC
TTCTCCACCTGCTCCTCCCACCTCTGCGTAGTGGGACTCTTCTTTGGCAGCGCCATCGTC
ATGTACATGGCCCCTAAGTCCCGCCATCCTGAGGAGCAGCAGAAGGTCCTTTTTCTATTT
TACAGTTCTTTCAACCCGATGCTAAACCCCCTGATTTACAACCTGAGGAATGTAGAGGTC
AAGGGTGCCCTGAGGAGAGCACTGTGCAAGGAAAGTCATTCC

ORF Protein

Cloned ORF protein sequence for pF1KB7097 Download

>KIBB7097  194 aa
MSYDRYVAICHPLRYFIIMTWKVCITLAITSWTCGSLLAMVHVSLILRLPFCGPREINHF
FCEILSVLRLACADTWLNQVVIFAACMFILVGPLCLVLVSYSHILAAILRIQSGEGRRKA
FSTCSSHLCVVGLFFGSAIVMYMAPKSRHPEEQQKVLFLFYSSFNPMLNPLIYNLRNVEV
KGALRRALCKESHS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7097 Download

>pF1KB7097  3695 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCCTACGAT
CGGTACGTGGCCATCTGCCACCCTCTCCGATATTTCATCATCATGACCTGGAAAGTCTGC
ATCACTCTGGCCATCACTTCCTGGACATGTGGCTCCCTCCTGGCTATGGTCCATGTGAGC
CTCATCCTAAGACTGCCCTTTTGTGGGCCTCGTGAAATCAACCACTTCTTCTGTGAAATC
CTGTCTGTCCTCAGGCTGGCCTGTGCTGATACCTGGCTCAACCAGGTGGTCATCTTTGCA
GCCTGCATGTTCATCCTGGTGGGACCACTCTGCCTGGTGCTGGTCTCCTACTCACACATC
CTGGCGGCCATCCTGAGGATCCAGTCTGGGGAGGGCCGCAGAAAGGCCTTCTCCACCTGC
TCCTCCCACCTCTGCGTAGTGGGACTCTTCTTTGGCAGCGCCATCGTCATGTACATGGCC
CCTAAGTCCCGCCATCCTGAGGAGCAGCAGAAGGTCCTTTTTCTATTTTACAGTTCTTTC
AACCCGATGCTAAACCCCCTGATTTACAACCTGAGGAATGTAGAGGTCAAGGGTGCCCTG
AGGAGAGCACTGTGCAAGGAAAGTCATTCCGTTTAAACGAATTCGAGCTCGGTACCCGGG
GATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAA
GGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTC
TAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGT
CCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCT
CTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCA
GCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCC
TGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAG
GTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGC
AGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGAT
GGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCA
CAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCG
GTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCG
CGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACT
GAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCT
CACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACG
CTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGC
ACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTC
GCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTC
GTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGA
TTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACC
CGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGT
ATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGA
GCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTC
AAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGC
AAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAG
GCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCC
GACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGT
TCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCT
TTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGG
CTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCT
TGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGAT
TAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGG
CTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAA
AAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGT
TTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTC
TACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATT
ATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGG
ATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGG
GGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGC
GCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATC
GCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGT
CTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGA
GGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAA
ACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGA
AGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTG
CCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTT
GTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTG
CGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAA
TTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCAT