Result of FASTA (omim) for pF1KB7097
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7097, 194 aa
  1>>>pF1KB7097 194 - 194 aa - 194 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.4275+/-0.000404; mu= 18.1501+/- 0.025
 mean_var=84.8266+/-20.552, 0's: 0 Z-trim(112.1): 112  B-trim: 1293 in 1/49
 Lambda= 0.139254
 statistics sampled from 20708 (20862) to 20708 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.622), E-opt: 0.2 (0.245), width:  16
 Scan time:  5.440

The best scores are:                                      opt bits E(85289)
NP_003691 (OMIM: 608494) olfactory receptor 2D2 [H ( 308)  653 141.2 1.6e-33
NP_036501 (OMIM: 608497) olfactory receptor 2F1 [H ( 317)  631 136.8 3.5e-32
XP_011514322 (OMIM: 608497) PREDICTED: olfactory r ( 317)  631 136.8 3.5e-32
XP_011514321 (OMIM: 608497) PREDICTED: olfactory r ( 317)  631 136.8 3.5e-32
NP_009091 (OMIM: 600578) olfactory receptor 2H2 [H ( 312)  622 135.0 1.2e-31
NP_001005216 (OMIM: 615016,615082) olfactory recep ( 311)  604 131.3 1.5e-30
NP_835462 (OMIM: 608493) olfactory receptor 10A5 [ ( 317)  603 131.1 1.7e-30
NP_001001957 (OMIM: 616729) olfactory receptor 2W3 ( 314)  597 129.9   4e-30
XP_011513214 (OMIM: 600578) PREDICTED: olfactory r ( 300)  592 128.9 7.8e-30
NP_001005191 (OMIM: 611538) olfactory receptor 7D4 ( 312)  583 127.1 2.8e-29
XP_011520809 (OMIM: 603232) PREDICTED: olfactory r ( 312)  578 126.1 5.6e-29
NP_036492 (OMIM: 603232) olfactory receptor 1F1 [H ( 312)  578 126.1 5.6e-29
XP_011520808 (OMIM: 603232) PREDICTED: olfactory r ( 322)  578 126.1 5.7e-29
NP_003687 (OMIM: 608495) olfactory receptor 6A2 [H ( 327)  571 124.7 1.5e-28
NP_001005487 (OMIM: 611677) olfactory receptor 13G ( 307)  566 123.7 2.9e-28
NP_002539 (OMIM: 164342) olfactory receptor 1D2 [H ( 312)  543 119.1 7.3e-27
NP_001004703 (OMIM: 614273) olfactory receptor 4C4 ( 309)  535 117.5 2.2e-26
NP_003688 (OMIM: 608492) olfactory receptor 5F1 [H ( 314)  521 114.7 1.6e-25
NP_006628 (OMIM: 608496) olfactory receptor 5I1 [H ( 314)  519 114.3 2.1e-25
NP_001004729 (OMIM: 615702) olfactory receptor 5AN ( 311)  513 113.1 4.8e-25
NP_689643 (OMIM: 611267) olfactory receptor 51E1 [ ( 318)  334 77.1 3.2e-14
NP_110401 (OMIM: 611268) olfactory receptor 51E2 [ ( 320)  323 74.9 1.5e-13


>>NP_003691 (OMIM: 608494) olfactory receptor 2D2 [Homo   (308 aa)
 initn: 671 init1: 541 opt: 653  Z-score: 722.7  bits: 141.2 E(85289): 1.6e-33
Smith-Waterman score: 653; 54.3% identity (78.5% similar) in 186 aa overlap (1-186:118-301)

                                             10        20        30
pF1KB7                               MSYDRYVAICHPLRYFIIMTWKVCITLAIT
                                     ::::::::::.::::  :::::::. ::  
NP_003 RKKVIAFTLCAARLLFFLIFGCTQCALLAVMSYDRYVAICNPLRYPNIMTWKVCVQLATG
        90       100       110       120       130       140       

               40        50        60        70        80        90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
       ::: : :...: ...:::::. :   : :::::  ..: :: .::  ....::   . ::
NP_003 SWTSGILVSVVDTTFILRLPYRGSNSIAHFFCEAPALLILASTDTHASEMAIFLMGVVIL
       150       160       170       180       190       200       

              100       110       120       130       140       150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
       . :. :.::::..:........:  :  ::::::.::: :: ::.::::. ::.:::   
NP_003 LIPVFLILVSYGRIIVTVVKMKSTVGSLKAFSTCGSHLMVVILFYGSAIITYMTPKSS--
       210       220       230       240       250       260       

              160       170       180       190    
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS
       ..:.: . .::.  .::::::::.::: .::.:::.        
NP_003 KQQEKSVSVFYAIVTPMLNPLIYSLRNKDVKAALRKVATRNFP 
         270       280       290       300         

>>NP_036501 (OMIM: 608497) olfactory receptor 2F1 [Homo   (317 aa)
 initn: 655 init1: 620 opt: 631  Z-score: 698.7  bits: 136.8 E(85289): 3.5e-32
Smith-Waterman score: 631; 50.0% identity (77.1% similar) in 192 aa overlap (1-192:118-309)

                                             10        20        30
pF1KB7                               MSYDRYVAICHPLRYFIIMTWKVCITLAIT
                                     :.::::::.:  :::  ::   .:  ::::
NP_036 EHKAIPFQSCAAQLFFSLALGGIEFVLLAVMAYDRYVAVCDALRYSAIMHGGLCARLAIT
        90       100       110       120       130       140       

               40        50        60        70        80        90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
       ::. : . . :.... ..::.:  . :.:. ::.:.:.::::.::  :.:.:... . .:
NP_036 SWVSGFISSPVQTAITFQLPMCRNKFIDHISCELLAVVRLACVDTSSNEVTIMVSSIVLL
       150       160       170       180       190       200       

              100       110       120       130       140       150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
       . :.::::.:: .:...::.::: :::.::: ::.::: ::.: .: ::  :. :.:   
NP_036 MTPFCLVLLSYIQIISTILKIQSREGRKKAFHTCASHLTVVALCYGVAIFTYIQPHSSPS
       210       220       230       240       250       260       

              160       170       180       190          
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS      
         :.:.. .::. ..:::::.::.::: ::::: .. : : :        
NP_036 VLQEKLFSVFYAILTPMLNPMIYSLRNKEVKGAWQKLLWKFSGLTSKLAT
       270       280       290       300       310       

>>XP_011514322 (OMIM: 608497) PREDICTED: olfactory recep  (317 aa)
 initn: 655 init1: 620 opt: 631  Z-score: 698.7  bits: 136.8 E(85289): 3.5e-32
Smith-Waterman score: 631; 50.0% identity (77.1% similar) in 192 aa overlap (1-192:118-309)

                                             10        20        30
pF1KB7                               MSYDRYVAICHPLRYFIIMTWKVCITLAIT
                                     :.::::::.:  :::  ::   .:  ::::
XP_011 EHKAIPFQSCAAQLFFSLALGGIEFVLLAVMAYDRYVAVCDALRYSAIMHGGLCARLAIT
        90       100       110       120       130       140       

               40        50        60        70        80        90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
       ::. : . . :.... ..::.:  . :.:. ::.:.:.::::.::  :.:.:... . .:
XP_011 SWVSGFISSPVQTAITFQLPMCRNKFIDHISCELLAVVRLACVDTSSNEVTIMVSSIVLL
       150       160       170       180       190       200       

              100       110       120       130       140       150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
       . :.::::.:: .:...::.::: :::.::: ::.::: ::.: .: ::  :. :.:   
XP_011 MTPFCLVLLSYIQIISTILKIQSREGRKKAFHTCASHLTVVALCYGVAIFTYIQPHSSPS
       210       220       230       240       250       260       

              160       170       180       190          
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS      
         :.:.. .::. ..:::::.::.::: ::::: .. : : :        
XP_011 VLQEKLFSVFYAILTPMLNPMIYSLRNKEVKGAWQKLLWKFSGLTSKLAT
       270       280       290       300       310       

>>XP_011514321 (OMIM: 608497) PREDICTED: olfactory recep  (317 aa)
 initn: 655 init1: 620 opt: 631  Z-score: 698.7  bits: 136.8 E(85289): 3.5e-32
Smith-Waterman score: 631; 50.0% identity (77.1% similar) in 192 aa overlap (1-192:118-309)

                                             10        20        30
pF1KB7                               MSYDRYVAICHPLRYFIIMTWKVCITLAIT
                                     :.::::::.:  :::  ::   .:  ::::
XP_011 EHKAIPFQSCAAQLFFSLALGGIEFVLLAVMAYDRYVAVCDALRYSAIMHGGLCARLAIT
        90       100       110       120       130       140       

               40        50        60        70        80        90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
       ::. : . . :.... ..::.:  . :.:. ::.:.:.::::.::  :.:.:... . .:
XP_011 SWVSGFISSPVQTAITFQLPMCRNKFIDHISCELLAVVRLACVDTSSNEVTIMVSSIVLL
       150       160       170       180       190       200       

              100       110       120       130       140       150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
       . :.::::.:: .:...::.::: :::.::: ::.::: ::.: .: ::  :. :.:   
XP_011 MTPFCLVLLSYIQIISTILKIQSREGRKKAFHTCASHLTVVALCYGVAIFTYIQPHSSPS
       210       220       230       240       250       260       

              160       170       180       190          
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS      
         :.:.. .::. ..:::::.::.::: ::::: .. : : :        
XP_011 VLQEKLFSVFYAILTPMLNPMIYSLRNKEVKGAWQKLLWKFSGLTSKLAT
       270       280       290       300       310       

>>NP_009091 (OMIM: 600578) olfactory receptor 2H2 [Homo   (312 aa)
 initn: 622 init1: 622 opt: 622  Z-score: 689.0  bits: 135.0 E(85289): 1.2e-31
Smith-Waterman score: 622; 49.2% identity (76.4% similar) in 191 aa overlap (1-191:116-306)

                                             10        20        30
pF1KB7                               MSYDRYVAICHPLRYFIIMTWKVCITLAIT
                                     :..:::::.:.::.:  :.  ..:  :: .
NP_009 PKKTISFLDCSVQIFIFLSLGTTECILLTVMAFDRYVAVCQPLHYATIIHPRLCWQLASV
          90       100       110       120       130       140     

               40        50        60        70        80        90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
       .:. : . ..:..   :.::::  :... : ::. ...::.: ::  :.. . .: .:::
NP_009 AWVIGLVESVVQTPSTLHLPFCPDRQVDDFVCEVPALIRLSCEDTSYNEIQVAVASVFIL
         150       160       170       180       190       200     

              100       110       120       130       140       150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
       : :: :.::::. :  :.:::.:..::::::.:::::: :: ::..:.:..:. ::. . 
NP_009 VVPLSLILVSYGAITWAVLRINSAKGRRKAFGTCSSHLTVVTLFYSSVIAVYLQPKNPYA
         210       220       230       240       250       260     

              160       170       180       190       
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS   
       .:. : . :::.  .: ::::::.::: ::  :.:: : ::      
NP_009 QERGKFFGLFYAVGTPSLNPLIYTLRNKEVTRAFRRLLGKEMGLTQS
         270       280       290       300       310  

>>NP_001005216 (OMIM: 615016,615082) olfactory receptor   (311 aa)
 initn: 619 init1: 598 opt: 604  Z-score: 669.5  bits: 131.3 E(85289): 1.5e-30
Smith-Waterman score: 604; 45.5% identity (77.2% similar) in 189 aa overlap (1-188:121-308)

                                             10        20        30
pF1KB7                               MSYDRYVAICHPLRYFIIMTWKVCITLAIT
                                     ::::::.:.:.::.: ..:  . :  ::..
NP_001 PEKTISYAGCMIQLYFVLALGTTECVLLVVMSYDRYAAVCRPLHYTVLMHPRFCHLLAVA
              100       110       120       130       140       150

               40        50        60        70        80          
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQV-VIFAACMFI
       ::. :   . .: :. . .:.:: :...:::::. ..:::.:.:: .:.. ..... .:.
NP_001 SWVSGFTNSALHSSFTFWVPLCGHRQVDHFFCEVPALLRLSCVDTHVNELTLMITSSIFV
              160       170       180       190       200       210

      90       100       110       120       130       140         
pF1KB7 LVGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRH
       :. :: :.:.::. :. ::::.::  : .:.:.::..:: .:.:::  :. ::. : : .
NP_001 LI-PLILILTSYGAIVRAILRMQSTTGLQKVFGTCGAHLMAVSLFFIPAMCMYLQPPSGN
               220       230       240       250       260         

     150       160       170       180       190    
pF1KB7 PEEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS
        ..: : . :::.  .: ::::::.:::  :.::..: .      
NP_001 SQDQGKFIALFYTVVTPSLNPLIYTLRNKVVRGAVKRLMGWE   
     270       280       290       300       310    

>>NP_835462 (OMIM: 608493) olfactory receptor 10A5 [Homo  (317 aa)
 initn: 641 init1: 595 opt: 603  Z-score: 668.3  bits: 131.1 E(85289): 1.7e-30
Smith-Waterman score: 603; 48.4% identity (76.3% similar) in 190 aa overlap (1-190:119-308)

                                             10        20        30
pF1KB7                               MSYDRYVAICHPLRYFIIMTWKVCITLAIT
                                     :.:::::::: ::.: .::. ..   :: .
NP_835 QDTTISFLGCATQMYFFFFFGVAECFLLATMAYDRYVAICSPLHYPVIMNQRTRAKLAAA
       90       100       110       120       130       140        

               40        50        60        70        80        90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
       ::  :  .: :... .. .::::  ..:::::.   ::.:.:::: : ..  ... ....
NP_835 SWFPGFPVATVQTTWLFSFPFCGTNKVNHFFCDSPPVLKLVCADTALFEIYAIVGTILVV
      150       160       170       180       190       200        

              100       110       120       130       140       150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
       . :  :.: ::..: ::::.: :..:..:::::::::: ::.::. :. . :. ::: . 
NP_835 MIPCLLILCSYTRIAAAILKIPSAKGKHKAFSTCSSHLLVVSLFYISSSLTYFWPKSNNS
      210       220       230       240       250       260        

              160       170       180       190         
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS     
        :..:.: : :.  .:::::.::.::: :::.:: :.. :         
NP_835 PESKKLLSLSYTVVTPMLNPIIYSLRNSEVKNALSRTFHKVLALRNCIP
      270       280       290       300       310       

>>NP_001001957 (OMIM: 616729) olfactory receptor 2W3 [Ho  (314 aa)
 initn: 630 init1: 589 opt: 597  Z-score: 661.8  bits: 129.9 E(85289): 4e-30
Smith-Waterman score: 597; 46.3% identity (77.1% similar) in 188 aa overlap (1-188:118-305)

                                             10        20        30
pF1KB7                               MSYDRYVAICHPLRYFIIMTWKVCITLAIT
                                     :.::: ::::.::.:..::. ..:  :. .
NP_001 CDKTISYMGCAIQLFLFLGLGGVECLLLAVMAYDRCVAICKPLHYMVIMNPRLCRGLVSV
        90       100       110       120       130       140       

               40        50        60        70        80        90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
       .: ::   ...   . :::: :: .:..::. :. ...:.::..:   . ..:.  . ..
NP_001 TWGCGVANSLAMSPVTLRLPRCGHHEVDHFLREMPALIRMACVSTVAIEGTVFVLAVGVV
       150       160       170       180       190       200       

              100       110       120       130       140       150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
       ..:: ..:.:::.:. :.:.:.:. ::.:::.::.::: ::.::.:. : ::: : .   
NP_001 LSPLVFILLSYSYIVRAVLQIRSASGRQKAFGTCGSHLTVVSLFYGNIIYMYMQPGASSS
       210       220       230       240       250       260       

              160       170       180       190       
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS   
       ..:   :.:::.  .:.::::::.::: :::::: : :         
NP_001 QDQGMFLMLFYNIVTPLLNPLIYTLRNREVKGALGRLLLGKRELGKE
       270       280       290       300       310    

>>XP_011513214 (OMIM: 600578) PREDICTED: olfactory recep  (300 aa)
 initn: 621 init1: 580 opt: 592  Z-score: 656.6  bits: 128.9 E(85289): 7.8e-30
Smith-Waterman score: 592; 48.6% identity (76.8% similar) in 181 aa overlap (1-181:116-296)

                                             10        20        30
pF1KB7                               MSYDRYVAICHPLRYFIIMTWKVCITLAIT
                                     :..:::::.:.::.:  :.  ..:  :: .
XP_011 PKKTISFLDCSVQIFIFLSLGTTECILLTVMAFDRYVAVCQPLHYATIIHPRLCWQLASV
          90       100       110       120       130       140     

               40        50        60        70        80        90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
       .:. : . ..:..   :.::::  :... : ::. ...::.: ::  :.. . .: .:::
XP_011 AWVIGLVESVVQTPSTLHLPFCPDRQVDDFVCEVPALIRLSCEDTSYNEIQVAVASVFIL
         150       160       170       180       190       200     

              100       110       120       130       140       150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
       : :: :.::::. :  :.:::.:..::::::.:::::: :: ::..:.:..:. ::. . 
XP_011 VVPLSLILVSYGAITWAVLRINSAKGRRKAFGTCSSHLTVVTLFYSSVIAVYLQPKNPYA
         210       220       230       240       250       260     

              160       170       180       190    
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS
       .:. : . :::.  .: ::::::.::: : :             
XP_011 QERGKFFGLFYAVGTPSLNPLIYTLRNKEQKRRGS         
         270       280       290       300         

>>NP_001005191 (OMIM: 611538) olfactory receptor 7D4 [Ho  (312 aa)
 initn: 599 init1: 575 opt: 583  Z-score: 646.7  bits: 127.1 E(85289): 2.8e-29
Smith-Waterman score: 583; 44.2% identity (76.3% similar) in 190 aa overlap (1-190:118-307)

                                             10        20        30
pF1KB7                               MSYDRYVAICHPLRYFIIMTWKVCITLAIT
                                     :.:::.:::::::.: .::.  .:  :...
NP_001 RSKDISYMGCLTQVYFLMMFAGMDTFLLAVMAYDRFVAICHPLHYTVIMNPCLCGLLVLA
        90       100       110       120       130       140       

               40        50        60        70        80        90
pF1KB7 SWTCGSLLAMVHVSLILRLPFCGPREINHFFCEILSVLRLACADTWLNQVVIFAACMFIL
       ::     ...::. :. :: :    :: :::::  .::..::..: ::..:...:  .. 
NP_001 SWFIIFWFSLVHILLMKRLTFSTGTEIPHFFCEPAQVLKVACSNTLLNNIVLYVATALLG
       150       160       170       180       190       200       

              100       110       120       130       140       150
pF1KB7 VGPLCLVLVSYSHILAAILRIQSGEGRRKAFSTCSSHLCVVGLFFGSAIVMYMAPKSRHP
       : :.  .: :::.:..... ..: .:. ::::::.::::::.::.:... .:..    : 
NP_001 VFPVAGILFSYSQIVSSLMGMSSTKGKYKAFSTCGSHLCVVSLFYGTGLGVYLSSAVTHS
       210       220       230       240       250       260       

              160       170       180       190     
pF1KB7 EEQQKVLFLFYSSFNPMLNPLIYNLRNVEVKGALRRALCKESHS 
        .....  ..:.  .:::::.::.::: .:::::.: : .     
NP_001 SQSSSTASVMYAMVTPMLNPFIYSLRNKDVKGALERLLSRADSCP
       270       280       290       300       310  




194 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 04:41:06 2016 done: Fri Nov  4 04:41:06 2016
 Total Scan time:  5.440 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com