UBXN6 ORF clone FHC14436

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC14436

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Clone info.

Species

human

Clone Name

pFN21AE5545 Sequence (with vector) Restriction Map

Product ID

FHC14436

ORF Sequence

DNA sequence (1164 bp)
Protein sequence (388 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5545

Symbol

UBXN6

Alias : UBXD1, UBXDC2

Description

UBX domain protein 6, transcript variant 2

Original Clone ID

oc95545

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1164 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 388 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS54201.1 7.6e-141 100.0 UBXN6 CCDS12129.1 8.4e-141 100.0 UBXN6 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018997 113 207 PF09409 PUB domain IPR001012 280 356 PF00789 UBX HMMSmart IPR006567 122 191 SM00580 PUG domain IPR001012 276 357 SM00166 UBX ProfileScan IPR001012 279 355 PS50033 UBX
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001164562 388 611946 100.0 100.0 NP_079517 441 611946 100.0 100.0 XP_016882814 475 611946 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5545 Download

>KIEE5545  1164 bp
ATGGCAGCCGCTGCCGCCCTAGCCCGGCTGGAGCAGAAGCAGTCCCGGGCCTGGGGCCCC
ACATCGCAGGACACCATCCGAAACCAGGTGAGAAAGGAACTTCAAGCCGAAGCCACCGTC
AGCGGGAGCCCCGAGGCCCCAGGGACCAACGTGGTATCTGAGCCCAGAGAGGAAGGCTCT
GCCCACCTGGCTGTGCCTGGCGTGTACTTCACCTGTCCGCTCACTGGGGCCACCCTGAGG
AAGGACCAGCGGGACGCCTGCATCAAGGAGGCCATTCTCTTGCACTTCTCCACCGACCCA
GTGGCCGCCTCCATCATGAAGATCTACACGTTCAACAAAGACCAGGACCGGGTGAAGCTG
GGTGTGGACACCATTGCCAAGTACCTGGACAACATCCACCTGCACCCCGAGGAGGAGAAG
TACCGGAAGATCAAGCTGCAGAACAAGGTGTTTCAGGAGCGCATTAACTGCCTGGAAGGG
ACCCACGAGTTTTTTGAGGCCATTGGGTTCCAGAAGGTGTTGCTTCCCGCCCAGGATCAG
GAGGACCCCGAGGAGTTCTACGTGCTGAGCGAGACCACCTTGGCCCAGCCCCAGAGCCTG
GAGAGGCACAAGGAACAGCTGCTGGCTGCGGAGCCCGTGCGCGCCAAGCTGGACAGGCAG
CGCCGCGTCTTCCAGCCCTCGCCCCTGGCCTCGCAGTTCGAACTGCCTGGGGACTTCTTC
AACCTCACAGCAGAGGAGATCAAGCGGGAGCAGAGGCTCAGGTCCGAGGCGGTGGAGCGG
CTGAGCGTGCTGCGGACCAAGGCCATGCGGGAGAAGGAGGAGCAGCGGGGGCTGCGCAAG
TACAACTACACGCTGCTGCGCGTGCGCCTCCCCGATGGCTGCCTCCTGCAGGGCACTTTC
TACGCTCGGGAGCGGCTGGGGGCGGTGTACGGGTTCGTCCGGGAGGCCCTGCAGAGCGAC
TGGCTGCCTTTTGAGCTGCTGGCCTCGGGAGGGCAGAAGCTGTCCGAGGACGAGAACCTG
GCCTTGAACGAGTGCGGGCTGGTGCCCTCTGCCCTCCTGACCTTCTCGTGGGACATGGCT
GTGCTGGAGGACATCAAGGCCGCGGGGGCCGAGCCGGACTCCATCCTGAAACCCGAGCTC
CTGTCAGCCATCGAGAAGCTCTTG

ORF Protein

Cloned ORF protein sequence for pFN21AE5545 Download

>KIEE5545  388 aa
MAAAAALARLEQKQSRAWGPTSQDTIRNQVRKELQAEATVSGSPEAPGTNVVSEPREEGS
AHLAVPGVYFTCPLTGATLRKDQRDACIKEAILLHFSTDPVAASIMKIYTFNKDQDRVKL
GVDTIAKYLDNIHLHPEEEKYRKIKLQNKVFQERINCLEGTHEFFEAIGFQKVLLPAQDQ
EDPEEFYVLSETTLAQPQSLERHKEQLLAAEPVRAKLDRQRRVFQPSPLASQFELPGDFF
NLTAEEIKREQRLRSEAVERLSVLRTKAMREKEEQRGLRKYNYTLLRVRLPDGCLLQGTF
YARERLGAVYGFVREALQSDWLPFELLASGGQKLSEDENLALNECGLVPSALLTFSWDMA
VLEDIKAAGAEPDSILKPELLSAIEKLL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5545 Download

>pFN21AE5545  5869 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCAGCCGCTGCCGCCCTAGCCCGGCTGGAGCA
GAAGCAGTCCCGGGCCTGGGGCCCCACATCGCAGGACACCATCCGAAACCAGGTGAGAAA
GGAACTTCAAGCCGAAGCCACCGTCAGCGGGAGCCCCGAGGCCCCAGGGACCAACGTGGT
ATCTGAGCCCAGAGAGGAAGGCTCTGCCCACCTGGCTGTGCCTGGCGTGTACTTCACCTG
TCCGCTCACTGGGGCCACCCTGAGGAAGGACCAGCGGGACGCCTGCATCAAGGAGGCCAT
TCTCTTGCACTTCTCCACCGACCCAGTGGCCGCCTCCATCATGAAGATCTACACGTTCAA
CAAAGACCAGGACCGGGTGAAGCTGGGTGTGGACACCATTGCCAAGTACCTGGACAACAT
CCACCTGCACCCCGAGGAGGAGAAGTACCGGAAGATCAAGCTGCAGAACAAGGTGTTTCA
GGAGCGCATTAACTGCCTGGAAGGGACCCACGAGTTTTTTGAGGCCATTGGGTTCCAGAA
GGTGTTGCTTCCCGCCCAGGATCAGGAGGACCCCGAGGAGTTCTACGTGCTGAGCGAGAC
CACCTTGGCCCAGCCCCAGAGCCTGGAGAGGCACAAGGAACAGCTGCTGGCTGCGGAGCC
CGTGCGCGCCAAGCTGGACAGGCAGCGCCGCGTCTTCCAGCCCTCGCCCCTGGCCTCGCA
GTTCGAACTGCCTGGGGACTTCTTCAACCTCACAGCAGAGGAGATCAAGCGGGAGCAGAG
GCTCAGGTCCGAGGCGGTGGAGCGGCTGAGCGTGCTGCGGACCAAGGCCATGCGGGAGAA
GGAGGAGCAGCGGGGGCTGCGCAAGTACAACTACACGCTGCTGCGCGTGCGCCTCCCCGA
TGGCTGCCTCCTGCAGGGCACTTTCTACGCTCGGGAGCGGCTGGGGGCGGTGTACGGGTT
CGTCCGGGAGGCCCTGCAGAGCGACTGGCTGCCTTTTGAGCTGCTGGCCTCGGGAGGGCA
GAAGCTGTCCGAGGACGAGAACCTGGCCTTGAACGAGTGCGGGCTGGTGCCCTCTGCCCT
CCTGACCTTCTCGTGGGACATGGCTGTGCTGGAGGACATCAAGGCCGCGGGGGCCGAGCC
GGACTCCATCCTGAAACCCGAGCTCCTGTCAGCCATCGAGAAGCTCTTGGTTTAAACGAA
TTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGG
CTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAG
CATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGA
CAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATT
GCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCAT
TTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTAC
AAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAG
ATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTAC
GTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAA
ATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTT
ATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAA
GTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAAC
AGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTC
AAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGT
CGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCAT
CTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
ACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTG
CACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCC
ATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAA
CTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAG
GCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCT
GATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGAT
GGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAA
CGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATG
ACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCA
CAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGA
ACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATC
ACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGG
CGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGAT
ACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGT
ATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTC
AGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACG
ACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCG
GTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTG
GTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCG
GCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCA
GAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGA
ACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGA
TCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGA
AACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTG
GTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGT
GGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTG
CGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATA
AACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT