OR4A13P ORF clone FHC11294

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC11294

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Clone info.

Species

human

Clone Name

pFN21AE0827 Sequence (with vector) Restriction Map

Product ID

FHC11294

Flexi Clone PID

FXC11294

ORF Sequence

DNA sequence (660 bp)
Protein sequence (220 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529256]

Gene

KIEE0827

Symbol

OR4A13P

Description

olfactory receptor, family 4, subfamily A, member 13 pseudogene

Original Clone ID

cp01227

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 660 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 220 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS73289.1 3.2e-60 80.5 OR4A5 CCDS31499.1 7.8e-58 76.0 OR4A16 CCDS31490.1 7.8e-55 71.3 OR4A47 CCDS31500.1 4.3e-50 63.5 OR4A15 CCDS73288.1 4.7e-47 62.0 OR4C46 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000725 32 44 PR00245 Olfactory receptor IPR000725 79 95 PR00245 Olfactory receptor IPR000725 138 147 PR00245 Olfactory receptor IPR000725 183 194 PR00245 Olfactory receptor HMMPfam IPR000276 5 190 PF00001 GPCR ProfileScan IPR017452 1 190 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 6 TDHLFGGTEIFLLVVMAYDRYVA 28 SECONDARY 23 2 47 LLVVAMTGGFLHSVFQIVVLYSL 69 PRIMARY 23 3 109 MCMVIFALLLISYGVSLNSLKTY 131 PRIMARY 23 4 142 TCSSHITVVVLFFVPCIFMYVRP 164 PRIMARY 23 5 170 IDKFVTVFYTVITPMLNPFLYTL 192 SECONDARY 23 6 198 INAIKHLLCKKLTIVRIRVSLLM 220 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001004703 309 614273 62.0 94.5 NP_001005487 307 611677 43.3 93.2 NP_001004729 311 615702 44.6 93.6 NP_835462 317 608493 42.9 95.0 NP_001005216 311 615016,615082 40.4 93.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0827 Download

>KIEE0827  660 bp
ATGGGCCAGCTATTTACAGACCACTTGTTTGGTGGAACTGAGATCTTCCTTCTGGTGGTG
ATGGCCTATGATCGCTACGTGGCCATCTGTAAGCCACTGCACTATTTAACCATCATGAAT
CGACAGGTTTCCATCCTTCTGTTGGTGGTGGCCATGACTGGAGGTTTCCTTCATTCTGTG
TTTCAAATTGTTGTTCTGTACAGTCTTCCTTTCTGTGGCCCCAATGTCATTGACCACTTT
TTCTGTGACATGTACCCATTATTGGAACTGGCGTGCACTGACACCTACTTTATAGGCCTC
GCTGTAGTTTTCAGTGGTGGAGCAATGTGTATGGTCATCTTCGCCCTTCTACTAATCTCC
TATGGAGTCAGCCTAAACTCCCTTAAAACTTATAGTCAGGAAGGGAGGCGTAAAGCCCTG
TCTACCTGCAGCTCGCACATCACCGTGGTTGTCCTCTTTTTTGTTCCCTGTATTTTCATG
TATGTTAGACCTGTCTCAAACTTCCCTATTGATAAATTCGTTACTGTGTTTTATACAGTT
ATCACACCCATGCTGAATCCTTTTTTATACACGTTGAGAAATTCAGAGATGATAAATGCT
ATAAAACACCTGTTGTGTAAGAAGCTAACTATAGTTAGAATAAGAGTGTCCCTCCTCATG

ORF Protein

Cloned ORF protein sequence for pFN21AE0827 Download

>KIEE0827  220 aa
MGQLFTDHLFGGTEIFLLVVMAYDRYVAICKPLHYLTIMNRQVSILLLVVAMTGGFLHSV
FQIVVLYSLPFCGPNVIDHFFCDMYPLLELACTDTYFIGLAVVFSGGAMCMVIFALLLIS
YGVSLNSLKTYSQEGRRKALSTCSSHITVVVLFFVPCIFMYVRPVSNFPIDKFVTVFYTV
ITPMLNPFLYTLRNSEMINAIKHLLCKKLTIVRIRVSLLM

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0827 Download

>pFN21AE0827  5365 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGGCCAGCTATTTACAGACCACTTGTTTGGTGG
AACTGAGATCTTCCTTCTGGTGGTGATGGCCTATGATCGCTACGTGGCCATCTGTAAGCC
ACTGCACTATTTAACCATCATGAATCGACAGGTTTCCATCCTTCTGTTGGTGGTGGCCAT
GACTGGAGGTTTCCTTCATTCTGTGTTTCAAATTGTTGTTCTGTACAGTCTTCCTTTCTG
TGGCCCCAATGTCATTGACCACTTTTTCTGTGACATGTACCCATTATTGGAACTGGCGTG
CACTGACACCTACTTTATAGGCCTCGCTGTAGTTTTCAGTGGTGGAGCAATGTGTATGGT
CATCTTCGCCCTTCTACTAATCTCCTATGGAGTCAGCCTAAACTCCCTTAAAACTTATAG
TCAGGAAGGGAGGCGTAAAGCCCTGTCTACCTGCAGCTCGCACATCACCGTGGTTGTCCT
CTTTTTTGTTCCCTGTATTTTCATGTATGTTAGACCTGTCTCAAACTTCCCTATTGATAA
ATTCGTTACTGTGTTTTATACAGTTATCACACCCATGCTGAATCCTTTTTTATACACGTT
GAGAAATTCAGAGATGATAAATGCTATAAAACACCTGTTGTGTAAGAAGCTAACTATAGT
TAGAATAAGAGTGTCCCTCCTCATGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCC
TCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAG
CTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTT
CGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGA
AAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGC
TGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAG
ATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAA
TGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATC
CGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGT
GGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGG
AAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGC
CTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG
GGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTT
CGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTA
TTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAAT
GACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGA
GAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACA
ACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACT
CGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACC
ACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACT
CTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTT
CTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGT
GGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTT
ATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATA
GGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGG
TATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAA
AGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGG
CGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGA
GGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCG
TGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGG
GAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTC
GCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCG
GTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCA
CTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGT
GGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAG
TTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCG
GTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATC
CTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTT
TGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAG
GAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAG
TGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTA
AAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTC
TGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAA
ATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATG
CGTCCGGCGTAGAGGATCGAGATCT