PANX3 ORF clone FHC10900

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC10900

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Clone info.

Species

human

Clone Name

pFN21AE0253 Sequence (with vector) Restriction Map

Product ID

FHC10900

Flexi Clone PID

FXC10900

ORF Sequence

DNA sequence (1176 bp)
Protein sequence (392 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528788]

Gene

KIEE0253

Symbol

PANX3

Alias : PX3

Description

pannexin 3

Original Clone ID

oc00953

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1176 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 392 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8447.1 2.9e-179 100.0 PANX3 CCDS8296.1 1.8e-60 43.3 PANX1 CCDS54544.1 2e-31 30.4 PANX2 CCDS14085.2 2.1e-31 30.4 PANX2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000990 47 244 PF00876 Innexin ProfileScan IPR000990 27 392 PS51013 Innexin
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 118 ALLMYLPVLLWQYAAVPALSSDL 140 PRIMARY 23 2 203 HSLVATYLLRNSLLLIFTSATYL 225 SECONDARY 23 3 264 TSLSIFQIVSLSSVAIYTILVPV 286 PRIMARY 23 4 329 ILLFLRANISELISFSWLSVLCV 351 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_443191 392 608422 100.0 100.0 NP_056183 426 608420 43.3 90.6 NP_001153772 643 608421 30.4 96.4 NP_443071 677 608421 30.4 96.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0253 Download

>KIEE0253  1176 bp
ATGTCACTTGCACACACAGCTGCAGAGTACATGCTCTCAGATGCCCTGCTGCCTGACCGC
AGGGGACCCCGCCTCAAAGGACTGCGTCTGGAACTGCCCCTGGACCGGATAGTCAAGTTC
GTAGCTGTGGGCTCCCCCTTGTTGCTGATGTCCCTGGCATTCGCCCAGGAGTTCTCCTCT
GGGTCTCCGATCAGCTGCTTCTCTCCCAGTAACTTCAGCATCCGGCAGGCAGCCTACGTG
GACAGCTCCTGCTGGGACTCACTGCTTCACCATAAGCAGGACGGGCCTGGCCAGGACAAA
ATGAAATCTCTCTGGCCCCACAAGGCCCTCCCCTACTCCCTGCTGGCCCTGGCCTTGCTC
ATGTACCTGCCGGTGCTGCTGTGGCAGTATGCAGCTGTGCCAGCCCTCAGCTCCGATCTG
CTGTTCATCATCAGCGAACTGGACAAATCTTATAATCGCTCCATCCGCCTCGTGCAGCAC
ATGCTGAAGATCCGGCAGAAGAGTTCCGACCCCTATGTGTTCTGGAATGAGCTGGAGAAG
GCTCGGAAAGAACGATACTTTGAATTCCCTTTGCTAGAGCGGTACCTGGCATGTAAGCAG
CGTTCACATTCGCTAGTGGCTACCTACCTCCTGAGGAACTCCCTCTTGCTCATCTTCACC
TCCGCCACTTACCTATACCTTGGTCATTTCCATCTGGATGTCTTCTTCCAGGAAGAATTC
AGCTGCTCCATCAAGACAGGGCTGCTAAGTGATGAGACCCATGTCCCCAATCTGATCACA
TGCAGGCTGACATCACTGTCCATTTTCCAGATTGTTAGCCTCTCCAGTGTAGCAATATAC
ACCATATTGGTTCCAGTGATAATATACAACCTCACACGGCTATGTCGGTGGGACAAACGA
CTTTTATCTGTCTATGAGATGCTCCCAGCTTTTGATCTCCTCAGCAGAAAGATGCTAGGA
TGTCCCATCAATGACCTCAATGTGATCCTTCTTTTCCTCCGAGCTAACATCTCTGAGCTC
ATCTCTTTTAGCTGGCTGAGTGTCTTATGTGTGTTGAAGGATACAACCACCCAGAAGCAC
AATATTGACACAGTAGTTGATTTTATGACTTTATTGGCTGGCTTAGAACCCTCAAAACCC
AAACACCTCACCAACTCGGCATGTGATGAACACCCA

ORF Protein

Cloned ORF protein sequence for pFN21AE0253 Download

>KIEE0253  392 aa
MSLAHTAAEYMLSDALLPDRRGPRLKGLRLELPLDRIVKFVAVGSPLLLMSLAFAQEFSS
GSPISCFSPSNFSIRQAAYVDSSCWDSLLHHKQDGPGQDKMKSLWPHKALPYSLLALALL
MYLPVLLWQYAAVPALSSDLLFIISELDKSYNRSIRLVQHMLKIRQKSSDPYVFWNELEK
ARKERYFEFPLLERYLACKQRSHSLVATYLLRNSLLLIFTSATYLYLGHFHLDVFFQEEF
SCSIKTGLLSDETHVPNLITCRLTSLSIFQIVSLSSVAIYTILVPVIIYNLTRLCRWDKR
LLSVYEMLPAFDLLSRKMLGCPINDLNVILLFLRANISELISFSWLSVLCVLKDTTTQKH
NIDTVVDFMTLLAGLEPSKPKHLTNSACDEHP

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0253 Download

>pFN21AE0253  5881 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCACTTGCACACACAGCTGCAGAGTACATGCT
CTCAGATGCCCTGCTGCCTGACCGCAGGGGACCCCGCCTCAAAGGACTGCGTCTGGAACT
GCCCCTGGACCGGATAGTCAAGTTCGTAGCTGTGGGCTCCCCCTTGTTGCTGATGTCCCT
GGCATTCGCCCAGGAGTTCTCCTCTGGGTCTCCGATCAGCTGCTTCTCTCCCAGTAACTT
CAGCATCCGGCAGGCAGCCTACGTGGACAGCTCCTGCTGGGACTCACTGCTTCACCATAA
GCAGGACGGGCCTGGCCAGGACAAAATGAAATCTCTCTGGCCCCACAAGGCCCTCCCCTA
CTCCCTGCTGGCCCTGGCCTTGCTCATGTACCTGCCGGTGCTGCTGTGGCAGTATGCAGC
TGTGCCAGCCCTCAGCTCCGATCTGCTGTTCATCATCAGCGAACTGGACAAATCTTATAA
TCGCTCCATCCGCCTCGTGCAGCACATGCTGAAGATCCGGCAGAAGAGTTCCGACCCCTA
TGTGTTCTGGAATGAGCTGGAGAAGGCTCGGAAAGAACGATACTTTGAATTCCCTTTGCT
AGAGCGGTACCTGGCATGTAAGCAGCGTTCACATTCGCTAGTGGCTACCTACCTCCTGAG
GAACTCCCTCTTGCTCATCTTCACCTCCGCCACTTACCTATACCTTGGTCATTTCCATCT
GGATGTCTTCTTCCAGGAAGAATTCAGCTGCTCCATCAAGACAGGGCTGCTAAGTGATGA
GACCCATGTCCCCAATCTGATCACATGCAGGCTGACATCACTGTCCATTTTCCAGATTGT
TAGCCTCTCCAGTGTAGCAATATACACCATATTGGTTCCAGTGATAATATACAACCTCAC
ACGGCTATGTCGGTGGGACAAACGACTTTTATCTGTCTATGAGATGCTCCCAGCTTTTGA
TCTCCTCAGCAGAAAGATGCTAGGATGTCCCATCAATGACCTCAATGTGATCCTTCTTTT
CCTCCGAGCTAACATCTCTGAGCTCATCTCTTTTAGCTGGCTGAGTGTCTTATGTGTGTT
GAAGGATACAACCACCCAGAAGCACAATATTGACACAGTAGTTGATTTTATGACTTTATT
GGCTGGCTTAGAACCCTCAAAACCCAAACACCTCACCAACTCGGCATGTGATGAACACCC
AGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
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