PANX3 ORF clone FXC10900

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Flexi ORF Clone FXC10900

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Clone info.

Species

human

Clone Name

pF1KE0253 Sequence (with vector) Restriction Map

Product ID

FXC10900

HaloTag Clone PID

FHC10900

ORF Sequence

DNA sequence (1176 bp)
Protein sequence (392 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528788]

Gene

KIEE0253

Symbol

PANX3

Alias : PX3

Description

pannexin 3

Original Clone ID

oc00953

Features of the cloned ORF sequence

Description

Length: 1176 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 392 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8447.1 2.9e-179 100.0 PANX3 CCDS8296.1 1.8e-60 43.3 PANX1 CCDS54544.1 2e-31 30.4 PANX2 CCDS14085.2 2.1e-31 30.4 PANX2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000990 47 244 PF00876 Innexin ProfileScan IPR000990 27 392 PS51013 Innexin
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 118 ALLMYLPVLLWQYAAVPALSSDL 140 PRIMARY 23 2 203 HSLVATYLLRNSLLLIFTSATYL 225 SECONDARY 23 3 264 TSLSIFQIVSLSSVAIYTILVPV 286 PRIMARY 23 4 329 ILLFLRANISELISFSWLSVLCV 351 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_443191 392 608422 100.0 100.0 NP_056183 426 608420 43.3 90.6 NP_001153772 643 608421 30.4 96.4 NP_443071 677 608421 30.4 96.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0253 Download

>KIEE0253  1176 bp
ATGTCACTTGCACACACAGCTGCAGAGTACATGCTCTCAGATGCCCTGCTGCCTGACCGC
AGGGGACCCCGCCTCAAAGGACTGCGTCTGGAACTGCCCCTGGACCGGATAGTCAAGTTC
GTAGCTGTGGGCTCCCCCTTGTTGCTGATGTCCCTGGCATTCGCCCAGGAGTTCTCCTCT
GGGTCTCCGATCAGCTGCTTCTCTCCCAGTAACTTCAGCATCCGGCAGGCAGCCTACGTG
GACAGCTCCTGCTGGGACTCACTGCTTCACCATAAGCAGGACGGGCCTGGCCAGGACAAA
ATGAAATCTCTCTGGCCCCACAAGGCCCTCCCCTACTCCCTGCTGGCCCTGGCCTTGCTC
ATGTACCTGCCGGTGCTGCTGTGGCAGTATGCAGCTGTGCCAGCCCTCAGCTCCGATCTG
CTGTTCATCATCAGCGAACTGGACAAATCTTATAATCGCTCCATCCGCCTCGTGCAGCAC
ATGCTGAAGATCCGGCAGAAGAGTTCCGACCCCTATGTGTTCTGGAATGAGCTGGAGAAG
GCTCGGAAAGAACGATACTTTGAATTCCCTTTGCTAGAGCGGTACCTGGCATGTAAGCAG
CGTTCACATTCGCTAGTGGCTACCTACCTCCTGAGGAACTCCCTCTTGCTCATCTTCACC
TCCGCCACTTACCTATACCTTGGTCATTTCCATCTGGATGTCTTCTTCCAGGAAGAATTC
AGCTGCTCCATCAAGACAGGGCTGCTAAGTGATGAGACCCATGTCCCCAATCTGATCACA
TGCAGGCTGACATCACTGTCCATTTTCCAGATTGTTAGCCTCTCCAGTGTAGCAATATAC
ACCATATTGGTTCCAGTGATAATATACAACCTCACACGGCTATGTCGGTGGGACAAACGA
CTTTTATCTGTCTATGAGATGCTCCCAGCTTTTGATCTCCTCAGCAGAAAGATGCTAGGA
TGTCCCATCAATGACCTCAATGTGATCCTTCTTTTCCTCCGAGCTAACATCTCTGAGCTC
ATCTCTTTTAGCTGGCTGAGTGTCTTATGTGTGTTGAAGGATACAACCACCCAGAAGCAC
AATATTGACACAGTAGTTGATTTTATGACTTTATTGGCTGGCTTAGAACCCTCAAAACCC
AAACACCTCACCAACTCGGCATGTGATGAACACCCA

ORF Protein

Cloned ORF protein sequence for pF1KE0253 Download

>KIEE0253  392 aa
MSLAHTAAEYMLSDALLPDRRGPRLKGLRLELPLDRIVKFVAVGSPLLLMSLAFAQEFSS
GSPISCFSPSNFSIRQAAYVDSSCWDSLLHHKQDGPGQDKMKSLWPHKALPYSLLALALL
MYLPVLLWQYAAVPALSSDLLFIISELDKSYNRSIRLVQHMLKIRQKSSDPYVFWNELEK
ARKERYFEFPLLERYLACKQRSHSLVATYLLRNSLLLIFTSATYLYLGHFHLDVFFQEEF
SCSIKTGLLSDETHVPNLITCRLTSLSIFQIVSLSSVAIYTILVPVIIYNLTRLCRWDKR
LLSVYEMLPAFDLLSRKMLGCPINDLNVILLFLRANISELISFSWLSVLCVLKDTTTQKH
NIDTVVDFMTLLAGLEPSKPKHLTNSACDEHP

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0253 Download

>pF1KE0253  4289 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCACTTGCA
CACACAGCTGCAGAGTACATGCTCTCAGATGCCCTGCTGCCTGACCGCAGGGGACCCCGC
CTCAAAGGACTGCGTCTGGAACTGCCCCTGGACCGGATAGTCAAGTTCGTAGCTGTGGGC
TCCCCCTTGTTGCTGATGTCCCTGGCATTCGCCCAGGAGTTCTCCTCTGGGTCTCCGATC
AGCTGCTTCTCTCCCAGTAACTTCAGCATCCGGCAGGCAGCCTACGTGGACAGCTCCTGC
TGGGACTCACTGCTTCACCATAAGCAGGACGGGCCTGGCCAGGACAAAATGAAATCTCTC
TGGCCCCACAAGGCCCTCCCCTACTCCCTGCTGGCCCTGGCCTTGCTCATGTACCTGCCG
GTGCTGCTGTGGCAGTATGCAGCTGTGCCAGCCCTCAGCTCCGATCTGCTGTTCATCATC
AGCGAACTGGACAAATCTTATAATCGCTCCATCCGCCTCGTGCAGCACATGCTGAAGATC
CGGCAGAAGAGTTCCGACCCCTATGTGTTCTGGAATGAGCTGGAGAAGGCTCGGAAAGAA
CGATACTTTGAATTCCCTTTGCTAGAGCGGTACCTGGCATGTAAGCAGCGTTCACATTCG
CTAGTGGCTACCTACCTCCTGAGGAACTCCCTCTTGCTCATCTTCACCTCCGCCACTTAC
CTATACCTTGGTCATTTCCATCTGGATGTCTTCTTCCAGGAAGAATTCAGCTGCTCCATC
AAGACAGGGCTGCTAAGTGATGAGACCCATGTCCCCAATCTGATCACATGCAGGCTGACA
TCACTGTCCATTTTCCAGATTGTTAGCCTCTCCAGTGTAGCAATATACACCATATTGGTT
CCAGTGATAATATACAACCTCACACGGCTATGTCGGTGGGACAAACGACTTTTATCTGTC
TATGAGATGCTCCCAGCTTTTGATCTCCTCAGCAGAAAGATGCTAGGATGTCCCATCAAT
GACCTCAATGTGATCCTTCTTTTCCTCCGAGCTAACATCTCTGAGCTCATCTCTTTTAGC
TGGCTGAGTGTCTTATGTGTGTTGAAGGATACAACCACCCAGAAGCACAATATTGACACA
GTAGTTGATTTTATGACTTTATTGGCTGGCTTAGAACCCTCAAAACCCAAACACCTCACC
AACTCGGCATGTGATGAACACCCAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGC
GGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGG
CCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCG
CCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGG
ACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGAC
CCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCA
TAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGT
GCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTC
CAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAG
AGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACAC
TAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGT
TGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAA
GCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGG
GTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAA
AAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCC
CTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAAT
GTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATT
GCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTG
AACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCC
TCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCG
AGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAA
TTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA
ACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGC
ATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGT
CGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGC
AACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGC
AGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCAT