VIPR2 ORF clone FHC08505

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC08505

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Clone info.

Species

human

Clone Name

pFN21AE9526 Sequence (with vector) Restriction Map

Product ID

FHC08505

ORF Sequence

DNA sequence (1314 bp)
Protein sequence (438 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE9526

Symbol

VIPR2

Alias : C16DUPq36.3, DUP7q36.3, PACAP-R-3, PACAP-R3, VIP-R-2, VPAC2, VPAC2R, VPCAP2R

Description

vasoactive intestinal peptide receptor 2, transcript variant 1

Original Clone ID

cp99526

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1314 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 438 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5950.1 2.6e-188 100.0 VIPR2 CCDS78295.1 3.2e-133 93.7 VIPR2 CCDS56481.1 1.3e-91 52.3 ADCYAP1R1 CCDS2698.1 1.2e-81 46.9 VIPR1 CCDS58828.1 3.9e-80 48.9 VIPR1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR002284 12 30 PR01155 GPCR IPR002284 32 51 PR01155 GPCR IPR002284 62 74 PR01155 GPCR IPR001571 76 87 PR00491 GPCR IPR002284 77 90 PR01155 GPCR IPR001571 88 103 PR00491 GPCR IPR001571 104 114 PR00491 GPCR IPR002284 115 129 PR01155 GPCR IPR000832 128 152 PR00249 GPCR IPR000832 160 184 PR00249 GPCR IPR002284 184 201 PR01155 GPCR IPR000832 204 227 PR00249 GPCR IPR002284 232 247 PR01155 GPCR IPR000832 241 266 PR00249 GPCR IPR000832 282 307 PR00249 GPCR IPR000832 326 346 PR00249 GPCR IPR002284 348 359 PR01155 GPCR IPR000832 357 378 PR00249 GPCR IPR002284 390 405 PR01155 GPCR IPR002284 411 434 PR01155 GPCR IPR001571 424 435 PR00491 GPCR HMMPfam IPR001879 50 111 PF02793 GPCR IPR000832 125 371 PF00002 GPCR HMMSmart IPR001879 48 118 SM00008 GPCR ProfileScan IPR001879 37 113 PS50227 GPCR IPR017981 126 379 PS50261 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 2 RTLLPPALLTCWLLAPVNSIHPE 24 SECONDARY 23 2 126 VKAIYTLGYSVSLMSLATGSIIL 148 SECONDARY 23 3 164 NLFLSFILRAISVLVKDDVLYSS 186 SECONDARY 23 4 206 LVFLQYCIMANFFWLLVEGLYLH 228 PRIMARY 23 5 240 CFLAYLLIGWGLPTVCIGAWTAA 262 PRIMARY 23 6 284 IRIPILISIIVNFVLFISIIRIL 306 PRIMARY 23 7 329 STLLLIPLFGVHYMVFAVFPISI 351 PRIMARY 23 8 359 FELCLGSFQGLVVAVLYCFLNSE 381 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003373 438 601970 100.0 100.0 XP_005249618 463 601970 98.2 99.1 XP_006716170 455 601970 93.5 93.4 NP_001291451 358 601970 81.7 100.0 NP_001186566 447 102981 52.3 95.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE9526 Download

>KIEE9526  1314 bp
ATGCGGACGCTGCTGCCTCCCGCGCTGCTGACCTGCTGGCTGCTCGCCCCCGTGAACAGC
ATTCACCCAGAATGCCGATTTCATCTGGAAATACAGGAGGAAGAAACAAAATGTGCAGAG
CTTCTGAGGTCTCAAACAGAAAAACACAAAGCCTGCAGTGGCGTCTGGGACAACATCACG
TGCTGGCGGCCTGCCAATGTGGGAGAGACCGTCACGGTGCCCTGCCCAAAAGTCTTCAGC
AATTTTTACAGCAAAGCAGGAAACATAAGCAAAAACTGTACGAGTGACGGATGGTCAGAG
ACGTTCCCAGATTTCGTCGATGCCTGTGGCTACAGCGACCCGGAGGATGAGAGCAAGATC
ACGTTTTATATTCTGGTGAAGGCCATTTATACCCTGGGCTACAGTGTCTCTCTGATGTCT
CTTGCAACAGGAAGCATAATTCTGTGCCTCTTCAGGAAGCTGCACTGCACCAGGAATTAC
ATCCACCTGAACCTGTTCCTGTCCTTCATCCTGAGAGCCATCTCAGTGCTGGTCAAGGAC
GACGTTCTCTACTCCAGCTCTGGCACGTTGCACTGCCCTGACCAGCCATCCTCCTGGGTG
GGCTGCAAGCTGAGCCTGGTCTTCCTGCAGTACTGCATCATGGCCAACTTCTTCTGGCTG
CTGGTGGAGGGGCTCTACCTCCACACCCTCCTGGTGGCCATGCTCCCCCCTAGAAGGTGC
TTCCTGGCCTACCTCCTGATCGGATGGGGCCTCCCCACCGTCTGCATCGGTGCATGGACT
GCGGCCAGGCTCTACTTAGAAGACACCGGTTGCTGGGATACAAACGACCACAGTGTGCCC
TGGTGGGTCATACGAATACCGATTTTAATTTCCATCATCGTCAATTTTGTCCTTTTCATT
AGTATTATACGAATTTTGCTGCAGAAGTTAACATCCCCAGATGTCGGCGGCAACGACCAG
TCTCAGTACAAGAGGCTGGCCAAGTCCACGCTCCTGCTTATCCCGCTGTTCGGCGTCCAC
TACATGGTGTTTGCCGTGTTTCCCATCAGCATCTCCTCCAAATACCAGATACTGTTTGAG
CTGTGCCTCGGGTCGTTCCAGGGCCTGGTGGTGGCCGTCCTCTACTGTTTCCTGAACAGT
GAGGTGCAGTGCGAGCTGAAGCGAAAATGGCGAAGCCGGTGCCCGACCCCGTCCGCGAGC
CGGGATTACAGGGTCTGCGGTTCCTCCTTCTCCCGCAACGGCTCGGAGGGCGCCCTGCAG
TTCCACCGCGGCTCCCGCGCCCAGTCCTTCCTGCAAACGGAGACCTCGGTCATC

ORF Protein

Cloned ORF protein sequence for pFN21AE9526 Download

>KIEE9526  438 aa
MRTLLPPALLTCWLLAPVNSIHPECRFHLEIQEEETKCAELLRSQTEKHKACSGVWDNIT
CWRPANVGETVTVPCPKVFSNFYSKAGNISKNCTSDGWSETFPDFVDACGYSDPEDESKI
TFYILVKAIYTLGYSVSLMSLATGSIILCLFRKLHCTRNYIHLNLFLSFILRAISVLVKD
DVLYSSSGTLHCPDQPSSWVGCKLSLVFLQYCIMANFFWLLVEGLYLHTLLVAMLPPRRC
FLAYLLIGWGLPTVCIGAWTAARLYLEDTGCWDTNDHSVPWWVIRIPILISIIVNFVLFI
SIIRILLQKLTSPDVGGNDQSQYKRLAKSTLLLIPLFGVHYMVFAVFPISISSKYQILFE
LCLGSFQGLVVAVLYCFLNSEVQCELKRKWRSRCPTPSASRDYRVCGSSFSRNGSEGALQ
FHRGSRAQSFLQTETSVI

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE9526 Download

>pFN21AE9526  6019 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCGGACGCTGCTGCCTCCCGCGCTGCTGACCTG
CTGGCTGCTCGCCCCCGTGAACAGCATTCACCCAGAATGCCGATTTCATCTGGAAATACA
GGAGGAAGAAACAAAATGTGCAGAGCTTCTGAGGTCTCAAACAGAAAAACACAAAGCCTG
CAGTGGCGTCTGGGACAACATCACGTGCTGGCGGCCTGCCAATGTGGGAGAGACCGTCAC
GGTGCCCTGCCCAAAAGTCTTCAGCAATTTTTACAGCAAAGCAGGAAACATAAGCAAAAA
CTGTACGAGTGACGGATGGTCAGAGACGTTCCCAGATTTCGTCGATGCCTGTGGCTACAG
CGACCCGGAGGATGAGAGCAAGATCACGTTTTATATTCTGGTGAAGGCCATTTATACCCT
GGGCTACAGTGTCTCTCTGATGTCTCTTGCAACAGGAAGCATAATTCTGTGCCTCTTCAG
GAAGCTGCACTGCACCAGGAATTACATCCACCTGAACCTGTTCCTGTCCTTCATCCTGAG
AGCCATCTCAGTGCTGGTCAAGGACGACGTTCTCTACTCCAGCTCTGGCACGTTGCACTG
CCCTGACCAGCCATCCTCCTGGGTGGGCTGCAAGCTGAGCCTGGTCTTCCTGCAGTACTG
CATCATGGCCAACTTCTTCTGGCTGCTGGTGGAGGGGCTCTACCTCCACACCCTCCTGGT
GGCCATGCTCCCCCCTAGAAGGTGCTTCCTGGCCTACCTCCTGATCGGATGGGGCCTCCC
CACCGTCTGCATCGGTGCATGGACTGCGGCCAGGCTCTACTTAGAAGACACCGGTTGCTG
GGATACAAACGACCACAGTGTGCCCTGGTGGGTCATACGAATACCGATTTTAATTTCCAT
CATCGTCAATTTTGTCCTTTTCATTAGTATTATACGAATTTTGCTGCAGAAGTTAACATC
CCCAGATGTCGGCGGCAACGACCAGTCTCAGTACAAGAGGCTGGCCAAGTCCACGCTCCT
GCTTATCCCGCTGTTCGGCGTCCACTACATGGTGTTTGCCGTGTTTCCCATCAGCATCTC
CTCCAAATACCAGATACTGTTTGAGCTGTGCCTCGGGTCGTTCCAGGGCCTGGTGGTGGC
CGTCCTCTACTGTTTCCTGAACAGTGAGGTGCAGTGCGAGCTGAAGCGAAAATGGCGAAG
CCGGTGCCCGACCCCGTCCGCGAGCCGGGATTACAGGGTCTGCGGTTCCTCCTTCTCCCG
CAACGGCTCGGAGGGCGCCCTGCAGTTCCACCGCGGCTCCCGCGCCCAGTCCTTCCTGCA
AACGGAGACCTCGGTCATCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGA
GTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGT
TGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCA
GACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAA
TGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAAT
AAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGG
GAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATC
CTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGT
CAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACT
TTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT
GTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCA
CGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
GAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCC
CGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTG
GTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTA
TGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATC
GGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTT
GATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATG
CCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGC
TCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCT
CGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTAC
ACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCC
TCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAG
CTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACA
TGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTT
TCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGC
GAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCT
CTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCG
TGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCA
AGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACT
ATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTA
ACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTA
ACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCT
TCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTT
TTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGA
TCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCA
TGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGC
ACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATT
AAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTT
ATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGC
CGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCAC
TTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCG
GCGTAGAGGATCGAGATCT