Gene/Protein Characteristic Table for FHC02490

Species
human

Product ID
FHC02490

Corresponding
Flexi Clone PID

ORF Sequence
DNA sequence (381 bp)
Protein sequence (127 aa)

Linker Type
Flexi type
The extra Val codon is attached to the 3'-end of the ORF, because a Pme I site ...

Cloning Site
SgfI-PmeI

GenBank Accession
ORF sequence is derived from [AB463432]

Gene
KIBB7515

Symbol
BATF3
Alias : JDP1, JUNDM1, SNFT

Description
basic leucine zipper transcription factor, ATF-like 3

Original Clone ID
cs00015

Quality control data of this clone

Characterization of the cloned ORF

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Features of the cloned ORF sequence

Length: 381 bp
Restriction map A Restriction map B
Features of the protein sequence

Length: 127 aa
Result of homology search against nr database ( FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
NP_061134 1.9e-42 100.0 basic leucine z...
Homo sapiens
XP_001107737 2.2e-41 97.6 basic leucine z...
Macaca mulatta
XP_003814223 1.4e-40 96.9 basic leucine z...
Pan paniscus
XP_004414539 5.3e-37 92.9 basic leucine z...
Odobenus rosmar...
XP_003422479 5.6e-37 88.1 LOW QUALITY PRO...
Loxodonta africana

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
[ zoom out (x2) ] PR00042 PR00042 PR00042 PR00042 PF00170 SM00338 PS50217 PS00036

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR000837 28 44 PR00042 Fos transforming protein
IPR000837 45 61 PR00042 Fos transforming protein
IPR000837 63 84 PR00042 Fos transforming protein
IPR000837 84 107 PR00042 Fos transforming protein
HMMPfam IPR011616 33 97 PF00170 bZIP transcription factor
HMMSmart IPR004827 33 97 SM00338 Basic-leucine zipper (bZIP) transcription factor
ProfileScan IPR004827 35 98 PS50217 Basic-leucine zipper (bZIP) transcription factor
ScanRegExp IPR004827 40 55 PS00036 Basic-leucine zipper (bZIP) transcription factor

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