Result of FASTA (omim) for
pFN21AB7515
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7515, 127 aa
1>>>pF1KB7515 127 - 127 aa - 127 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7437+/-0.000244; mu= 7.9088+/- 0.016
mean_var=152.5276+/-30.024, 0's: 0 Z-trim(126.3): 49 B-trim: 7 in 2/55
Lambda= 0.103848
statistics sampled from 51739 (51807) to 51739 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.879), E-opt: 0.2 (0.607), width: 16
Scan time: 5.870
The best scores are: opt bits E(85289)
NP_061134 (OMIM: 612470) basic leucine zipper tran ( 127) 867 139.3 1.6e-33
XP_016857172 (OMIM: 612470) PREDICTED: basic leuci ( 138) 453 77.4 7.7e-15
NP_006390 (OMIM: 612476) basic leucine zipper tran ( 125) 327 58.4 3.5e-09
NP_612465 (OMIM: 614983) basic leucine zipper tran ( 274) 249 47.1 2e-05
NP_001193417 (OMIM: 603148) cyclic AMP-dependent t ( 124) 199 39.3 0.002
NP_001193413 (OMIM: 603148) cyclic AMP-dependent t ( 124) 199 39.3 0.002
XP_005273203 (OMIM: 603148) PREDICTED: cyclic AMP- ( 181) 199 39.4 0.0027
NP_001665 (OMIM: 603148) cyclic AMP-dependent tran ( 181) 199 39.4 0.0027
NP_001025458 (OMIM: 603148) cyclic AMP-dependent t ( 181) 199 39.4 0.0027
XP_011507881 (OMIM: 603148) PREDICTED: cyclic AMP- ( 181) 199 39.4 0.0027
XP_016876464 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 197 39.1 0.0031
NP_001128519 (OMIM: 608657) jun dimerization prote ( 163) 197 39.1 0.0031
NP_569736 (OMIM: 608657) jun dimerization protein ( 163) 197 39.1 0.0031
XP_016876462 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 197 39.1 0.0031
NP_001128520 (OMIM: 608657) jun dimerization prote ( 163) 197 39.1 0.0031
XP_016876463 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 197 39.1 0.0031
XP_005267389 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 197 39.1 0.0031
NP_001128521 (OMIM: 608657) jun dimerization prote ( 174) 197 39.1 0.0032
XP_016876461 (OMIM: 608657) PREDICTED: jun dimeriz ( 174) 197 39.1 0.0032
XP_016876460 (OMIM: 608657) PREDICTED: jun dimeriz ( 206) 197 39.2 0.0036
NP_001287785 (OMIM: 136515) fos-related antigen 1 ( 205) 191 38.3 0.0067
>>NP_061134 (OMIM: 612470) basic leucine zipper transcri (127 aa)
initn: 867 init1: 867 opt: 867 Z-score: 723.0 bits: 139.3 E(85289): 1.6e-33
Smith-Waterman score: 867; 100.0% identity (100.0% similar) in 127 aa overlap (1-127:1-127)
10 20 30 40 50 60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
70 80 90 100 110 120
pF1KB7 VAGCLPR
:::::::
NP_061 VAGCLPR
>>XP_016857172 (OMIM: 612470) PREDICTED: basic leucine z (138 aa)
initn: 605 init1: 437 opt: 453 Z-score: 387.4 bits: 77.4 E(85289): 7.7e-15
Smith-Waterman score: 453; 71.4% identity (81.9% similar) in 105 aa overlap (1-105:1-100)
10 20 30 40 50 60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
::::: : ... .: .: .: :.: . .:. : : .:
XP_016 DKLHE----LMERTIFLITQIRSLGFILSH-SFSLRPHAYTCIILQLGRGAAPYQELALK
70 80 90 100 110
pF1KB7 VAGCLPR
XP_016 ASKDLSEEWATIPCSCLCRGWCV
120 130
>>NP_006390 (OMIM: 612476) basic leucine zipper transcri (125 aa)
initn: 333 init1: 295 opt: 327 Z-score: 285.9 bits: 58.4 E(85289): 3.5e-09
Smith-Waterman score: 327; 54.3% identity (77.2% similar) in 92 aa overlap (25-116:16-104)
10 20 30 40 50 60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
: : .:. :: :.:.::::::.:::.::..:::::
NP_006 MPHSSDSSDSSFSRSPPPGKQDSSDDVRRVQRREKNRIAAQKSRQRQTQKA
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
: :: : :.::..:. ::.:: .::::::..: .:. :: .: .: .: ::
NP_006 DTLHLESEDLEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAAS---TPSPPEVVY
60 70 80 90 100
pF1KB7 VAGCLPR
NP_006 SAHAFHQPHVSSPRFQP
110 120
>>NP_612465 (OMIM: 614983) basic leucine zipper transcri (274 aa)
initn: 270 init1: 224 opt: 249 Z-score: 218.4 bits: 47.1 E(85289): 2e-05
Smith-Waterman score: 249; 47.4% identity (84.2% similar) in 76 aa overlap (29-104:12-86)
10 20 30 40 50 60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
: .:....:.... .:::.::::::.:.:.::
NP_612 MHLCGGNGLLTQTDPKEQQRQLKK-QKNRAAAQRSRQKHTDKA
10 20 30 40
70 80 90 100 110 120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
: ::...::::..: ::.:: .: :: ...:. ::..::.
NP_612 DALHQQHESLEKDNLALRKEIQSLQAELAWWSRTLHVHERLCPMDCASCSAPGLLGCWDQ
50 60 70 80 90 100
pF1KB7 VAGCLPR
NP_612 AEGLLGPGPQGQHGCREQLELFQTPGSCYPAQPLSPGPQPHDSPSLLQCPLPSLSLGPAV
110 120 130 140 150 160
>>NP_001193417 (OMIM: 603148) cyclic AMP-dependent trans (124 aa)
initn: 283 init1: 198 opt: 199 Z-score: 182.3 bits: 39.3 E(85289): 0.002
Smith-Waterman score: 199; 41.7% identity (75.0% similar) in 72 aa overlap (31-102:25-96)
10 20 30 40 50 60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
.::.:.:: ::::.:..:: . :.:. .:.
NP_001 MSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKT
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
. :..: :.::. :. :. .: .: .: .:: :. :. :
NP_001 ECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFI
60 70 80 90 100 110
pF1KB7 VAGCLPR
NP_001 QQIKEGTLQS
120
>>NP_001193413 (OMIM: 603148) cyclic AMP-dependent trans (124 aa)
initn: 283 init1: 198 opt: 199 Z-score: 182.3 bits: 39.3 E(85289): 0.002
Smith-Waterman score: 199; 41.7% identity (75.0% similar) in 72 aa overlap (31-102:25-96)
10 20 30 40 50 60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
.::.:.:: ::::.:..:: . :.:. .:.
NP_001 MSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKT
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
. :..: :.::. :. :. .: .: .: .:: :. :. :
NP_001 ECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFI
60 70 80 90 100 110
pF1KB7 VAGCLPR
NP_001 QQIKEGTLQS
120
>>XP_005273203 (OMIM: 603148) PREDICTED: cyclic AMP-depe (181 aa)
initn: 268 init1: 198 opt: 199 Z-score: 180.2 bits: 39.4 E(85289): 0.0027
Smith-Waterman score: 199; 41.7% identity (75.0% similar) in 72 aa overlap (31-102:82-153)
10 20 30 40 50 60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
.::.:.:: ::::.:..:: . :.:. .:.
XP_005 KHLCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKT
60 70 80 90 100 110
70 80 90 100 110 120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
. :..: :.::. :. :. .: .: .: .:: :. :. :
XP_005 ECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFI
120 130 140 150 160 170
pF1KB7 VAGCLPR
XP_005 QQIKEGTLQS
180
>>NP_001665 (OMIM: 603148) cyclic AMP-dependent transcri (181 aa)
initn: 268 init1: 198 opt: 199 Z-score: 180.2 bits: 39.4 E(85289): 0.0027
Smith-Waterman score: 199; 41.7% identity (75.0% similar) in 72 aa overlap (31-102:82-153)
10 20 30 40 50 60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
.::.:.:: ::::.:..:: . :.:. .:.
NP_001 KHLCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKT
60 70 80 90 100 110
70 80 90 100 110 120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
. :..: :.::. :. :. .: .: .: .:: :. :. :
NP_001 ECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFI
120 130 140 150 160 170
pF1KB7 VAGCLPR
NP_001 QQIKEGTLQS
180
>>NP_001025458 (OMIM: 603148) cyclic AMP-dependent trans (181 aa)
initn: 268 init1: 198 opt: 199 Z-score: 180.2 bits: 39.4 E(85289): 0.0027
Smith-Waterman score: 199; 41.7% identity (75.0% similar) in 72 aa overlap (31-102:82-153)
10 20 30 40 50 60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
.::.:.:: ::::.:..:: . :.:. .:.
NP_001 KHLCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKT
60 70 80 90 100 110
70 80 90 100 110 120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
. :..: :.::. :. :. .: .: .: .:: :. :. :
NP_001 ECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFI
120 130 140 150 160 170
pF1KB7 VAGCLPR
NP_001 QQIKEGTLQS
180
>>XP_011507881 (OMIM: 603148) PREDICTED: cyclic AMP-depe (181 aa)
initn: 268 init1: 198 opt: 199 Z-score: 180.2 bits: 39.4 E(85289): 0.0027
Smith-Waterman score: 199; 41.7% identity (75.0% similar) in 72 aa overlap (31-102:82-153)
10 20 30 40 50 60
pF1KB7 MSQGLPAAGSVLQRSVAAPGNQPQPQPQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQKA
.::.:.:: ::::.:..:: . :.:. .:.
XP_011 KHLCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKT
60 70 80 90 100 110
70 80 90 100 110 120
pF1KB7 DKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEKMCPLLLCPMNFVPVPPRPDP
. :..: :.::. :. :. .: .: .: .:: :. :. :
XP_011 ECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLFI
120 130 140 150 160 170
pF1KB7 VAGCLPR
XP_011 QQIKEGTLQS
180
127 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 08:21:58 2016 done: Fri Nov 4 08:21:58 2016
Total Scan time: 5.870 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]