ZNF394 ORF clone FHC01944

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC01944

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Clone info.

Species

human

Clone Name

pFN21AB7869 Sequence (with vector) Restriction Map

Product ID

FHC01944

Flexi Clone PID

FXC01944

ORF Sequence

DNA sequence (1683 bp)
Protein sequence (561 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527469]

Gene

KIBB7869

Symbol

ZNF394

Alias : ZKSCAN14, ZSCAN46

Description

zinc finger protein 394

Original Clone ID

cs00369

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1683 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 561 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5666.1 2.4e-142 100.0 ZNF394 CCDS34698.1 2.6e-37 37.9 ZKSCAN1 CCDS69349.1 3.4e-36 39.0 ZKSCAN1 CCDS14649.1 4e-36 37.6 ZNF449 CCDS4647.1 7.3e-35 37.3 ZKSCAN4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003309 59 151 PF02023 Transcription regulator SCAN IPR001909 155 185 PF01352 Krueppel-associated box IPR007087 358 380 PF00096 Zinc finger IPR007087 386 408 PF00096 Zinc finger IPR007087 414 436 PF00096 Zinc finger IPR007087 469 491 PF00096 Zinc finger IPR007087 497 519 PF00096 Zinc finger IPR007087 525 547 PF00096 Zinc finger HMMSmart IPR003309 60 172 SM00431 Transcription regulator SCAN IPR001909 155 217 SM00349 Krueppel-associated box IPR015880 358 380 SM00355 Zinc finger IPR015880 386 408 SM00355 Zinc finger IPR015880 414 436 SM00355 Zinc finger IPR015880 442 463 SM00355 Zinc finger IPR015880 469 491 SM00355 Zinc finger IPR015880 497 519 SM00355 Zinc finger IPR015880 525 547 SM00355 Zinc finger ProfileScan IPR003309 64 146 PS50804 Transcription regulator SCAN IPR001909 155 230 PS50805 Krueppel-associated box IPR007087 358 385 PS50157 Zinc finger IPR007087 386 413 PS50157 Zinc finger IPR007087 414 441 PS50157 Zinc finger IPR007087 442 468 PS50157 Zinc finger IPR007087 469 496 PS50157 Zinc finger IPR007087 497 524 PS50157 Zinc finger IPR007087 525 552 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011514861 563 601260 37.9 94.1 NP_001333510 563 601260 37.9 94.1 NP_003430 563 601260 37.9 94.1 NP_001273983 527 601260 39.0 87.3 NP_001333509 527 601260 39.0 87.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7869 Download

>KIBB7869  1683 bp
ATGAATTCCAGCTTGACCGCCCAGAGGCGCGGCAGTGACGCCGAGTTGGGACCCTGGGTG
ATGGCTGCGAGGTCCAAGGACGCGGCGCCGTCCCAACGCGACGGACTTTTGCCCGTGAAA
GTGGAGGAAGACTCACCCGGAAGTTGGGAGCCCAACTATCCCGCGGCTTCGCCGGACCCC
GAAACTTCTCGACTGCACTTTAGGCAGCTGCGTTACCAGGAGGTGGCTGGACCGGAAGAG
GCGCTGAGCCGGCTCCGAGAACTCTGTCGTCGGTGGCTGAGACCCGAGCTGCTCTCCAAG
GAGCAGATCCTGGAGCTGCTGGTGCTGGAGCAGTTCCTCACCATCCTGCCCGAGGAGCTT
CAAGCCTGGGTGCGAGAGCACTGCCCAGAGAGCGGGGAGGAGGCGGTGGCCGTGGTGCGG
GCTCTGCAGCGAGCGCTCGATGGAACCTCATCCCAGGGGATGGTGACTTTCGAGGACACG
GCTGTGTCTCTAACCTGGGAGGAGTGGGAGCGCCTGGACCCAGCACGGAGGGACTTCTGC
AGAGAGAGTGCGCAGAAGGATTCCGGGAGCACAGTTCCGCCGAGTTTGGAAAGCAGAGTG
GAGAACAAAGAGTTGATTCCAATGCAACAAATTTTAGAAGAAGCGGAGCCACAGGGGCAA
CTACAAGAAGCGTTCCAGGGGAAGCGCCCCCTGTTTTCTAAGTGTGGCAGTACCCATGAG
GACAGGGTGGAAAAGCAGTCCGGAGACCCCTTGCCCCTGAAACTTGAAAATTCTCCTGAA
GCAGAAGGACTCAACAGCATCTCAGATGTCAATAAGAATGGTTCCATAGAAGGGGAAGAC
TCTAAAAATAATGAATTGCAGAACAGTGCCAGGTGTTCCAACCTTGTTCTATGTCAGCAC
ATCCCGAAAGCAGAGAGGCCCACTGACAGTGAGGAACACGGGAACAAGTGCAAGCAAAGT
TTCCACATGGTGACGTGGCACGTGCTGAAACCTCACAAGTCTGACAGTGGAGACAGTTTC
CATCATTCCAGCCTTTTTGAGACCCAGAGGCAGCTCCATGAAGAAAGACCTTATAAATGT
GGTAACTGTGGGAAGAGTTTCAAACAACGCTCTGACCTCTTTAGACACCAGAGAATCCAC
ACAGGTGAGAAACCCTATGGCTGCCAAGAATGTGGGAAAAGCTTCAGCCAGAGTGCTGCC
CTGACCAAGCACCAGAGGACACACACAGGCGAGAAGCCGTACACCTGTCTGAAATGTGGG
GAGCGCTTCAGGCAGAATTCACACCTAAATCGTCATCAAAGTACCCACAGTAGAGACAAA
CATTTTAAATGTGAGGAATGCGGGGAAACCTGTCATATTTCCAACCTTTTTAGACATCAG
AGACTACATAAAGGGGAAAGACCCTATAAGTGTGAAGAATGCGAGAAGAGCTTCAAACAG
CGCTCTGACCTCTTTAAACACCACAGAATCCACACTGGGGAGAAGCCCTATGGATGTTCC
GTCTGTGGGAAACGCTTCAATCAGAGTGCAACCCTCATTAAACACCAGAGAATTCACACT
GGGGAAAAGCCTTACAAATGTCTTGAATGTGGGGAAAGATTTAGACAAAGTACACACCTT
ATCCGACACCAAAGAATTCATCAAAATAAAGTGCTGTCGGCTGGGCGTGGTGGCTCACGC
CTA

ORF Protein

Cloned ORF protein sequence for pFN21AB7869 Download

>KIBB7869  561 aa
MNSSLTAQRRGSDAELGPWVMAARSKDAAPSQRDGLLPVKVEEDSPGSWEPNYPAASPDP
ETSRLHFRQLRYQEVAGPEEALSRLRELCRRWLRPELLSKEQILELLVLEQFLTILPEEL
QAWVREHCPESGEEAVAVVRALQRALDGTSSQGMVTFEDTAVSLTWEEWERLDPARRDFC
RESAQKDSGSTVPPSLESRVENKELIPMQQILEEAEPQGQLQEAFQGKRPLFSKCGSTHE
DRVEKQSGDPLPLKLENSPEAEGLNSISDVNKNGSIEGEDSKNNELQNSARCSNLVLCQH
IPKAERPTDSEEHGNKCKQSFHMVTWHVLKPHKSDSGDSFHHSSLFETQRQLHEERPYKC
GNCGKSFKQRSDLFRHQRIHTGEKPYGCQECGKSFSQSAALTKHQRTHTGEKPYTCLKCG
ERFRQNSHLNRHQSTHSRDKHFKCEECGETCHISNLFRHQRLHKGERPYKCEECEKSFKQ
RSDLFKHHRIHTGEKPYGCSVCGKRFNQSATLIKHQRIHTGEKPYKCLECGERFRQSTHL
IRHQRIHQNKVLSAGRGGSRL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7869 Download

>pFN21AB7869  6388 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAATTCCAGCTTGACCGCCCAGAGGCGCGGCAG
TGACGCCGAGTTGGGACCCTGGGTGATGGCTGCGAGGTCCAAGGACGCGGCGCCGTCCCA
ACGCGACGGACTTTTGCCCGTGAAAGTGGAGGAAGACTCACCCGGAAGTTGGGAGCCCAA
CTATCCCGCGGCTTCGCCGGACCCCGAAACTTCTCGACTGCACTTTAGGCAGCTGCGTTA
CCAGGAGGTGGCTGGACCGGAAGAGGCGCTGAGCCGGCTCCGAGAACTCTGTCGTCGGTG
GCTGAGACCCGAGCTGCTCTCCAAGGAGCAGATCCTGGAGCTGCTGGTGCTGGAGCAGTT
CCTCACCATCCTGCCCGAGGAGCTTCAAGCCTGGGTGCGAGAGCACTGCCCAGAGAGCGG
GGAGGAGGCGGTGGCCGTGGTGCGGGCTCTGCAGCGAGCGCTCGATGGAACCTCATCCCA
GGGGATGGTGACTTTCGAGGACACGGCTGTGTCTCTAACCTGGGAGGAGTGGGAGCGCCT
GGACCCAGCACGGAGGGACTTCTGCAGAGAGAGTGCGCAGAAGGATTCCGGGAGCACAGT
TCCGCCGAGTTTGGAAAGCAGAGTGGAGAACAAAGAGTTGATTCCAATGCAACAAATTTT
AGAAGAAGCGGAGCCACAGGGGCAACTACAAGAAGCGTTCCAGGGGAAGCGCCCCCTGTT
TTCTAAGTGTGGCAGTACCCATGAGGACAGGGTGGAAAAGCAGTCCGGAGACCCCTTGCC
CCTGAAACTTGAAAATTCTCCTGAAGCAGAAGGACTCAACAGCATCTCAGATGTCAATAA
GAATGGTTCCATAGAAGGGGAAGACTCTAAAAATAATGAATTGCAGAACAGTGCCAGGTG
TTCCAACCTTGTTCTATGTCAGCACATCCCGAAAGCAGAGAGGCCCACTGACAGTGAGGA
ACACGGGAACAAGTGCAAGCAAAGTTTCCACATGGTGACGTGGCACGTGCTGAAACCTCA
CAAGTCTGACAGTGGAGACAGTTTCCATCATTCCAGCCTTTTTGAGACCCAGAGGCAGCT
CCATGAAGAAAGACCTTATAAATGTGGTAACTGTGGGAAGAGTTTCAAACAACGCTCTGA
CCTCTTTAGACACCAGAGAATCCACACAGGTGAGAAACCCTATGGCTGCCAAGAATGTGG
GAAAAGCTTCAGCCAGAGTGCTGCCCTGACCAAGCACCAGAGGACACACACAGGCGAGAA
GCCGTACACCTGTCTGAAATGTGGGGAGCGCTTCAGGCAGAATTCACACCTAAATCGTCA
TCAAAGTACCCACAGTAGAGACAAACATTTTAAATGTGAGGAATGCGGGGAAACCTGTCA
TATTTCCAACCTTTTTAGACATCAGAGACTACATAAAGGGGAAAGACCCTATAAGTGTGA
AGAATGCGAGAAGAGCTTCAAACAGCGCTCTGACCTCTTTAAACACCACAGAATCCACAC
TGGGGAGAAGCCCTATGGATGTTCCGTCTGTGGGAAACGCTTCAATCAGAGTGCAACCCT
CATTAAACACCAGAGAATTCACACTGGGGAAAAGCCTTACAAATGTCTTGAATGTGGGGA
AAGATTTAGACAAAGTACACACCTTATCCGACACCAAAGAATTCATCAAAATAAAGTGCT
GTCGGCTGGGCGTGGTGGCTCACGCCTAGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT