Gene/Protein Characteristic Table for
FHC00635
Species
human
Product ID
FHC00635
Linker Type
Cloning Site
SgfI-PmeI
Symbol
JMJD2C
Description
jumonji domain containing 2C
Characterization of the cloned ORF
N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand
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Length: 3141 bp
Restriction map A
Restriction map B
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Length: 1047 aa
Result of homology search against nr database (
FASTA output,
Multiple alignment)
Entry Exp ID% Protein Source CAH73283 0 99.9 jumonji domain ... Homo sapiens EAW58730 0 99.5 jumonji domain ... Homo sapiens XP_001144111 0 99.2 jumonji domain ... Pan troglodytes Q9H3R0 0 99.7 Lysine-specific... Homo sapiens AAI04860 0 99.7 Jumonji domain ... Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR003349 17 62 PF02375 Transcription factor jumonji IPR013129 177 293 PF02373 Transcription factor jumonji HMMSmart IPR003349 15 57 SM00545 Transcription factor jumonji IPR003347 144 310 SM00558 Transcription factor jumonji/aspartyl beta-hydroxylase IPR001965 689 747 SM00249 Zinc finger IPR001965 809 865 SM00249 Zinc finger IPR002999 877 934 SM00333 Tudor IPR002999 935 991 SM00333 Tudor ProfileScan IPR003349 16 58 PS51183 Transcription factor jumonji IPR003347 144 310 PS51184 Transcription factor jumonji/aspartyl beta-hydroxylase
Result of homology search against disease genes in OMIM database
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055876 1056 605469 99.9 95.6 NP_055830 1096 609765 76.4 94.7 NP_055478 1064 609764 77.0 95.3 Inquiries or Suggestions ?
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