Gene/Protein Characteristic Table for FHC00085

Species
human

Product ID
FHC00085

Corresponding
Flexi Clone PID

ORF Sequence
DNA sequence (2739 bp)
Protein sequence (913 aa)

Linker Type
Flexi type
The extra Val codon is attached to the 3'-end of the ORF, because a Pme I site ...

Cloning Site
SgfI-PmeI

GenBank Accession
ORF sequence is derived from [AB385339]

Gene

Symbol
DNAJC6
Alias : DJC6, PARK19

Description
DnaJ (Hsp40) homolog, subfamily C, member 6

Original Clone ID

Quality control data of this clone

Characterization of the cloned ORF

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Features of the cloned ORF sequence

Length: 2739 bp
Restriction map A Restriction map B
Features of the protein sequence

Length: 913 aa
Result of homology search against nr database ( FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
NP_055602 0 100.0 putative tyrosi...
Homo sapiens
BAA32318 0 100.0 KIAA0473 protei...
Homo sapiens
XP_003806985 0 99.8 putative tyrosi...
Pan paniscus
XP_003921514 0 99.0 putative tyrosi...
Saimiri bolivie...
NP_001243793 0 99.7 putative tyrosi...
Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
[ zoom out (x2) ] PF00226 SM00271 PS51181 PS50056 PS51182 PS50076 PS00383

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR001623 861 902 PF00226 Heat shock protein DnaJ
HMMSmart IPR001623 848 909 SM00271 Heat shock protein DnaJ
ProfileScan IPR014019 55 222 PS51181 Phosphatase tensin type
IPR000387 139 210 PS50056 Protein-tyrosine phosphatase
IPR014020 228 366 PS51182 C2 tensin-type
IPR001623 849 913 PS50076 Heat shock protein DnaJ
ScanRegExp IPR000387 162 174 PS00383 Protein-tyrosine phosphatase

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
SOSUI2 1 166 DGRAASSILVGAMFIFCNLYSTP 188 PRIMARY 23

Result of homology search against disease genes in OMIM database
(FASTA output, Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%)
NP_055602 913 608375 100.0 100.0
NP_005246 1311 602052 70.2 99.2
XP_001127411 1348 602052 61.4 85.8
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