RBBP5 ORF clone FXC10515

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Flexi ORF Clone FXC10515

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Clone info.

Species

human

Clone Name

pF1KB9771 Sequence (with vector) Restriction Map

Product ID

FXC10515

HaloTag Clone PID

FHC10515

Original Clone PID

ORK10515

ORF Sequence

DNA sequence (1614 bp)
Protein sequence (538 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527310]

Gene

KIBB9771

Symbol

RBBP5

Alias : RBQ3, SWD1

Description

retinoblastoma binding protein 5, transcript variant 1

Original Clone ID

ee22358

Features of the cloned ORF sequence

Description

Length: 1614 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 538 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS30983.1 3e-137 99.8 RBBP5 CCDS53463.1 3e-125 99.8 RBBP5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR019781 30 52 PF00400 WD40 repeat IPR019781 61 94 PF00400 WD40 repeat HMMSmart IPR001680 14 52 SM00320 WD40 repeat IPR001680 55 94 SM00320 WD40 repeat IPR001680 182 226 SM00320 WD40 repeat IPR001680 241 280 SM00320 WD40 repeat IPR001680 283 322 SM00320 WD40 repeat ProfileScan IPR017986 36 103 PS50294 WD40-repeat-containing domain IPR019782 62 103 PS50082 WD40 repeat 2
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_005048 538 600697 99.8 100.0 XP_011508135 537 600697 99.6 100.0 NP_001180201 500 600697 99.8 91.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9771 Download

>KIBB9771  1614 bp
ATGAACCTCGAGTTGCTGGAGTCCTTTGGGCAGAACTATCCAGAGGAAGCTGATGGAACT
TTGGATTGTATCAGCATGGCTTTGACTTGCACCTTTAACAGGTGGGGCACACTGCTTGCA
GTTGGCTGTAATGATGGCCGAATTGTCATCTGGGATTTCTTGACAAGAGGCATTGCTAAA
ATAATTAGTGCACACATCCATCCAGTGTGTTCTTTATGCTGGAGCCGAGATGGTCATAAA
CTCGTGAGTGCTTCCACTGATAACATAGTGTCACAGTGGGATGTTCTTTCAGGCGACTGT
GACCAGAGGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAATATCATCCACGAGATCAG
AACAAGGTTCTCGTGTGTCCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCC
AAACATGTTTTTCTGCCGGTGGACGATGACTCCGATTTGAACGTTGTGGCATCTTTTGAT
AGGCGAGGGGAATATATTTATACGGGAAACGCAAAAGGCAAGATTTTGGTCCTAAAAACA
GATTCTCAGGATCTTGTTGCTTCCTTCAGAGTGACAACTGGAACAAGCAATACCACAGCC
ATTAAGTCAATTGAGTTTGCCCGGAAGGGGAGTTGCTTTTTAATTAACACGGCAGATCGA
ATAATCAGAGTTTATGATGGCAGAGAAATCTTAACATGTGGAAGAGATGGAGAGCCTGAA
CCTATGCAGAAATTGCAGGATTTGGTGAATAGGACCCCATGGAAGAAATGTTGTTTCTCT
GGGGATGGGGAATACATCGTGGCAGGTTCTGCCCGGCAGCATGCCCTGTACATCTGGGAG
AAGAGCATTGGCAACCTGGTGAAGATTCTCCATGGGACGAGAGGAGAACTCCTCTTGGAT
GTAGCTTGGCATCCTGTTCGACCCATCATAGCATCCATTTCCAGTGGAGTGGTATCTATC
TGGGCACAGAATCAAGTAGAAAACTGGAGTGCATTTGCACCAGACTTCAAAGAATTGGAT
GAAAATGTAGAATACGAAGAAAGGGAATCAGAGTTTGATATTGAAGATGAAGATAAGAGT
GAGCCTGAGCAGACAGGGGCTGATGCTGCAGAAGATGAGGAAGTGGATGTCACCAGCGTG
GACCCTATTGCTGCCTTCTGTAGCAGTGATGAAGAGCTGGAAGATTCAAAGGCTCTATTG
TATTTACCCATTGCCCCTGAGGTAGAAGACCCAGAAGAAAATCCTTACGGCCCCCCACCG
GATGCAGTCCAAACCTCCTTGATGGATGAAGGGGCTAGTTCAGAGAAGAAGAGGCAGTCC
TCAGCAGATGGGTCCCAGCCACCTAAGAAGAAACCCAAAACAACCAATATAGAACTTCAA
GGAGTACCAAATGATGAAGTCCATCCACTACTGGGTGTGAAGGGGGATGGCAAATCCAAG
AAGAAGCAAGCAGGCCGGCCTAAAGGATCAAAAGGTAAAGAGAAAGATTCTCCATTTAAA
CCGAAACTCTACAAAGGGGACAGAGGTTTACCTCTGGAAGGATCAGCGAAGGGTAAAGTG
CAGGCGGAACTCAGCCAGCCCTTGACAGCAGGAGGAGCAATCTCAGAACTGTTA

ORF Protein

Cloned ORF protein sequence for pF1KB9771 Download

>KIBB9771  538 aa
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQ
NKVLVCPMKSAPVMLTLSDSKHVFLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKT
DSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPP
DAVQTSLMDEGASSEKKRQSSADGSQPPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSK
KKQAGRPKGSKGKEKDSPFKPKLYKGDRGLPLEGSAKGKVQAELSQPLTAGGAISELL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9771 Download

>pF1KB9771  4727 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAACCTCGAG
TTGCTGGAGTCCTTTGGGCAGAACTATCCAGAGGAAGCTGATGGAACTTTGGATTGTATC
AGCATGGCTTTGACTTGCACCTTTAACAGGTGGGGCACACTGCTTGCAGTTGGCTGTAAT
GATGGCCGAATTGTCATCTGGGATTTCTTGACAAGAGGCATTGCTAAAATAATTAGTGCA
CACATCCATCCAGTGTGTTCTTTATGCTGGAGCCGAGATGGTCATAAACTCGTGAGTGCT
TCCACTGATAACATAGTGTCACAGTGGGATGTTCTTTCAGGCGACTGTGACCAGAGGTTT
CGATTCCCTTCACCCATCTTAAAAGTCCAATATCATCCACGAGATCAGAACAAGGTTCTC
GTGTGTCCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCCAAACATGTTTTT
CTGCCGGTGGACGATGACTCCGATTTGAACGTTGTGGCATCTTTTGATAGGCGAGGGGAA
TATATTTATACGGGAAACGCAAAAGGCAAGATTTTGGTCCTAAAAACAGATTCTCAGGAT
CTTGTTGCTTCCTTCAGAGTGACAACTGGAACAAGCAATACCACAGCCATTAAGTCAATT
GAGTTTGCCCGGAAGGGGAGTTGCTTTTTAATTAACACGGCAGATCGAATAATCAGAGTT
TATGATGGCAGAGAAATCTTAACATGTGGAAGAGATGGAGAGCCTGAACCTATGCAGAAA
TTGCAGGATTTGGTGAATAGGACCCCATGGAAGAAATGTTGTTTCTCTGGGGATGGGGAA
TACATCGTGGCAGGTTCTGCCCGGCAGCATGCCCTGTACATCTGGGAGAAGAGCATTGGC
AACCTGGTGAAGATTCTCCATGGGACGAGAGGAGAACTCCTCTTGGATGTAGCTTGGCAT
CCTGTTCGACCCATCATAGCATCCATTTCCAGTGGAGTGGTATCTATCTGGGCACAGAAT
CAAGTAGAAAACTGGAGTGCATTTGCACCAGACTTCAAAGAATTGGATGAAAATGTAGAA
TACGAAGAAAGGGAATCAGAGTTTGATATTGAAGATGAAGATAAGAGTGAGCCTGAGCAG
ACAGGGGCTGATGCTGCAGAAGATGAGGAAGTGGATGTCACCAGCGTGGACCCTATTGCT
GCCTTCTGTAGCAGTGATGAAGAGCTGGAAGATTCAAAGGCTCTATTGTATTTACCCATT
GCCCCTGAGGTAGAAGACCCAGAAGAAAATCCTTACGGCCCCCCACCGGATGCAGTCCAA
ACCTCCTTGATGGATGAAGGGGCTAGTTCAGAGAAGAAGAGGCAGTCCTCAGCAGATGGG
TCCCAGCCACCTAAGAAGAAACCCAAAACAACCAATATAGAACTTCAAGGAGTACCAAAT
GATGAAGTCCATCCACTACTGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCA
GGCCGGCCTAAAGGATCAAAAGGTAAAGAGAAAGATTCTCCATTTAAACCGAAACTCTAC
AAAGGGGACAGAGGTTTACCTCTGGAAGGATCAGCGAAGGGTAAAGTGCAGGCGGAACTC
AGCCAGCCCTTGACAGCAGGAGGAGCAATCTCAGAACTGTTAGTTTAAACGAATTCGAGC
TCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAA
CAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACC
CCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGG
TTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGC
TACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATT
CATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCA
GCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCG
CCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGG
ATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATG
CTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGC
TATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCG
CAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAG
GACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTC
GACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGAT
CTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGG
CGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATC
GAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAG
CATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGT
GAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGC
CGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATA
GCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTC
GTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGAC
GAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGA
CTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACG
TGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAA
TCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGT
GGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAG
AGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAA
CTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAG
TGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCA
GCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACAC
CGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAA
GGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCC
AGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCG
TCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGC
CTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATC
CCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGG
AACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGT
GGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAA
AATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCT
GCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAA
TCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGC
GTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAG
CGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCAT
GCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAG
AGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTC
GTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGG
ATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTG
CCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAA
CTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT