PNMAL1 ORF clone FXC05204

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC05204

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Clone info.

Species

human

Clone Name

pF1KE0471 Sequence (with vector) Restriction Map

Product ID

FXC05204

HaloTag Clone PID

FHC05204

ORF Sequence

DNA sequence (1317 bp)
Protein sequence (439 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528135]

Gene

KIEE0471

Symbol

PNMAL1

Description

paraneoplastic Ma antigen family-like 1, transcript variant 1

Original Clone ID

oc01171

Features of the cloned ORF sequence

Description

Length: 1317 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 439 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33059.1 6.7e-119 99.8 PNMAL1 CCDS46124.1 1.3e-98 99.7 PNMAL1 CCDS9818.1 4.9e-16 52.3 PNMA1 CCDS9908.1 9.1e-15 38.7 MOAP1 CCDS34868.1 5.4e-14 41.3 PNMA2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition None - - - - -
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 148 EALGVLLGAVVQIIFCMDA 166 PRIMARY 19 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0471 Download

>KIEE0471  1317 bp
ATGTCCAAGACCATGGCGATGAACCTTCTGGAGGATTGGTGCAGGGGAATGGAAGTGGAC
ATCCACAGGTCCTTGTTGGTCACAGGCATCCCAGAGGACTGTGGGCAGGCAGAAATTGAG
GAGACCTTGAATGGGGTCCTCTCCCCACTGGGCCCGTACCGCGCGCTCAACAAGATTTTT
GTGAGGGAAGAGAATGTTAAAGCTGCCCTCATTGAGGTTGGTGAAGGTGTGAATCTGAGC
ACCATCCCCCGTGAATTCCCAGGAAGGGGTGGTGTCTGGAGAGTGGTCTGTAGAGACCCT
ACCCAGGATGCCGAGTTTTTAAAAAATCTGAATGAATTCCTGGATGCCGAGGGGCGCACC
TGGGAGGATGTGGTCCGCCTGCTCCAGCTCAACCACCCCACCCTGTCCCAGAACCAGCAT
CAGCCCCCAGAGAACTGGGCAGAAGCTCTGGGGGTGCTTCTGGGAGCAGTGGTGCAGATC
ATCTTCTGCATGGATGCCGAGATCCGCAGCCGGGAGGAAGCCAGGGCCCAGGAGGCCGCT
GAATTCGAGGAGATGGCAGCCTGGGCTTTAGCAGCAGGGAGGAAGGTGAAGAAAGAACCG
GGGCTTGCAGCAGAGGTGGGTTCTGCCTTAAAGGCAGAGACCCCCAACAACTGGAATGCC
ACGGAAGACCAGCATGAGCCTACCAAACCTTTGGTTCGCAGGGCTGGAGCTAAGTCTCGC
TCCAGGAGAAAGAAGCAGAAGAAGAACTCCAGGCAGGAAGCAGTGCCCTGGAAAAAACCC
AAAGGCATCAATTCCAACAGCACAGCTAACTTGGAGGATCCTGAGGTGGGTGATGCTGAA
AGCATGGCGATCTCAGAGCCGATCAAGGGCAGCAGAAAGCCCTGTGTGAATAAGGAGGAG
TTGGCTTTGAAGAAGCCCATGGCGAAATGTGCCTGGAAGGGTCCCAGAGAGCCACCTCAG
GATGCCCGGGCAGAAGCCGAGAGCCCAGGAGGCGCCTCTGAGTCAGACCAAGATGGTGGC
CATGAAAGCCCACCAAAGAAGAAGGCCGTGGCCTGGGTGTCTGCCAAGAACCCCGCTCCC
ATGAGGAAGAAGAAGAAGGTGAGCTTGGGCCCTGTCTCCTACGTCTTGGTTGACTCAGAA
GATGGCAGGAAGAAGCCGGTGATGCCAAAGAAAGGGCCAGGCTCAAGAAGGGAGGCATCA
GATCAGAAGGCCCCTCGGGGCCAGCAGCCTGCCGAGGCAACAGCCTCAACCTCTAGGGGT
CCGAAGGCCAAGCCAGAAGGCTCTCCTCGGCGTGCCACCAATGAATCCAGAAAGGTT

ORF Protein

Cloned ORF protein sequence for pF1KE0471 Download

>KIEE0471  439 aa
MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
WEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAA
EFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKSR
SRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEVGDAESMAISEPIKGSRKPCVNKEE
LALKKPMAKCAWKGPREPPQDARAEAESPGGASESDQDGGHESPPKKKAVAWVSAKNPAP
MRKKKKVSLGPVSYVLVDSEDGRKKPVMPKKGPGSRREASDQKAPRGQQPAEATASTSRG
PKAKPEGSPRRATNESRKV

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0471 Download

>pF1KE0471  4430 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCCAAGACC
ATGGCGATGAACCTTCTGGAGGATTGGTGCAGGGGAATGGAAGTGGACATCCACAGGTCC
TTGTTGGTCACAGGCATCCCAGAGGACTGTGGGCAGGCAGAAATTGAGGAGACCTTGAAT
GGGGTCCTCTCCCCACTGGGCCCGTACCGCGCGCTCAACAAGATTTTTGTGAGGGAAGAG
AATGTTAAAGCTGCCCTCATTGAGGTTGGTGAAGGTGTGAATCTGAGCACCATCCCCCGT
GAATTCCCAGGAAGGGGTGGTGTCTGGAGAGTGGTCTGTAGAGACCCTACCCAGGATGCC
GAGTTTTTAAAAAATCTGAATGAATTCCTGGATGCCGAGGGGCGCACCTGGGAGGATGTG
GTCCGCCTGCTCCAGCTCAACCACCCCACCCTGTCCCAGAACCAGCATCAGCCCCCAGAG
AACTGGGCAGAAGCTCTGGGGGTGCTTCTGGGAGCAGTGGTGCAGATCATCTTCTGCATG
GATGCCGAGATCCGCAGCCGGGAGGAAGCCAGGGCCCAGGAGGCCGCTGAATTCGAGGAG
ATGGCAGCCTGGGCTTTAGCAGCAGGGAGGAAGGTGAAGAAAGAACCGGGGCTTGCAGCA
GAGGTGGGTTCTGCCTTAAAGGCAGAGACCCCCAACAACTGGAATGCCACGGAAGACCAG
CATGAGCCTACCAAACCTTTGGTTCGCAGGGCTGGAGCTAAGTCTCGCTCCAGGAGAAAG
AAGCAGAAGAAGAACTCCAGGCAGGAAGCAGTGCCCTGGAAAAAACCCAAAGGCATCAAT
TCCAACAGCACAGCTAACTTGGAGGATCCTGAGGTGGGTGATGCTGAAAGCATGGCGATC
TCAGAGCCGATCAAGGGCAGCAGAAAGCCCTGTGTGAATAAGGAGGAGTTGGCTTTGAAG
AAGCCCATGGCGAAATGTGCCTGGAAGGGTCCCAGAGAGCCACCTCAGGATGCCCGGGCA
GAAGCCGAGAGCCCAGGAGGCGCCTCTGAGTCAGACCAAGATGGTGGCCATGAAAGCCCA
CCAAAGAAGAAGGCCGTGGCCTGGGTGTCTGCCAAGAACCCCGCTCCCATGAGGAAGAAG
AAGAAGGTGAGCTTGGGCCCTGTCTCCTACGTCTTGGTTGACTCAGAAGATGGCAGGAAG
AAGCCGGTGATGCCAAAGAAAGGGCCAGGCTCAAGAAGGGAGGCATCAGATCAGAAGGCC
CCTCGGGGCCAGCAGCCTGCCGAGGCAACAGCCTCAACCTCTAGGGGTCCGAAGGCCAAG
CCAGAAGGCTCTCCTCGGCGTGCCACCAATGAATCCAGAAAGGTTGTTTAAACGAATTCG
AGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGC
TAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATA
ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATC
CGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCA
AGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGAC
ATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTA
GCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGG
GCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCA
AGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGC
ATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTC
GGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCA
GCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTG
CAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTG
CTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAG
GATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATG
CGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGC
ATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAA
GAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGAT
GGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAAT
GGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGAC
ATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTC
CTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTT
GACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACC
GGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGG
AAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCT
GGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCA
GAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCT
CGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTC
GGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGT
TCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATC
CGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGC
CACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTG
GTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCC
AGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAG
CGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGA
TCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGAT
TTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATAC
AGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTC
AGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGT
TAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTG
TCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGT
AAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGA
TGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAG
AAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCC
CATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC
GAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCT
TTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAG
CGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAA
CTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTAC
AAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT