Result of FASTA (ccds) for pF1KE0471
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0471, 439 aa
  1>>>pF1KE0471 439 - 439 aa - 439 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.1848+/-0.000858; mu= 5.5623+/- 0.051
 mean_var=174.0194+/-35.212, 0's: 0 Z-trim(112.8): 20  B-trim: 8 in 1/50
 Lambda= 0.097224
 statistics sampled from 13496 (13512) to 13496 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.753), E-opt: 0.2 (0.415), width:  16
 Scan time:  3.450

The best scores are:                                      opt bits E(32554)
CCDS33059.1 PNMAL1 gene_id:55228|Hs108|chr19       ( 439) 2946 425.1 6.7e-119
CCDS46124.1 PNMAL1 gene_id:55228|Hs108|chr19       ( 378) 2464 357.5 1.3e-98
CCDS9818.1 PNMA1 gene_id:9240|Hs108|chr14          ( 353)  508 83.1 4.9e-16
CCDS9908.1 MOAP1 gene_id:64112|Hs108|chr14         ( 351)  478 78.9 9.1e-15
CCDS34868.1 PNMA2 gene_id:10687|Hs108|chr8         ( 364)  460 76.4 5.4e-14
CCDS65344.1 PNMA3 gene_id:29944|Hs108|chrX         ( 455)  441 73.8 4.1e-13
CCDS35435.2 PNMA3 gene_id:29944|Hs108|chrX         ( 463)  441 73.8 4.1e-13
CCDS14718.1 PNMA5 gene_id:114824|Hs108|chrX        ( 448)  432 72.5 9.6e-13


>>CCDS33059.1 PNMAL1 gene_id:55228|Hs108|chr19            (439 aa)
 initn: 2946 init1: 2946 opt: 2946  Z-score: 2248.1  bits: 425.1 E(32554): 6.7e-119
Smith-Waterman score: 2946; 99.8% identity (100.0% similar) in 439 aa overlap (1-439:1-439)

               10        20        30        40        50        60
pF1KE0 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS33 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRVLNKIF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 WEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 WEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 EFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKSR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 SRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEVGDAESMAISEPIKGSRKPCVNKEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEVGDAESMAISEPIKGSRKPCVNKEE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 LALKKPMAKCAWKGPREPPQDARAEAESPGGASESDQDGGHESPPKKKAVAWVSAKNPAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LALKKPMAKCAWKGPREPPQDARAEAESPGGASESDQDGGHESPPKKKAVAWVSAKNPAP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 MRKKKKVSLGPVSYVLVDSEDGRKKPVMPKKGPGSRREASDQKAPRGQQPAEATASTSRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MRKKKKVSLGPVSYVLVDSEDGRKKPVMPKKGPGSRREASDQKAPRGQQPAEATASTSRG
              370       380       390       400       410       420

              430         
pF1KE0 PKAKPEGSPRRATNESRKV
       :::::::::::::::::::
CCDS33 PKAKPEGSPRRATNESRKV
              430         

>>CCDS46124.1 PNMAL1 gene_id:55228|Hs108|chr19            (378 aa)
 initn: 2464 init1: 2464 opt: 2464  Z-score: 1883.7  bits: 357.5 E(32554): 1.3e-98
Smith-Waterman score: 2464; 99.7% identity (100.0% similar) in 366 aa overlap (1-366:1-366)

               10        20        30        40        50        60
pF1KE0 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS46 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRVLNKIF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 WEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 WEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 EFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKSR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 SRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEVGDAESMAISEPIKGSRKPCVNKEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEVGDAESMAISEPIKGSRKPCVNKEE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 LALKKPMAKCAWKGPREPPQDARAEAESPGGASESDQDGGHESPPKKKAVAWVSAKNPAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LALKKPMAKCAWKGPREPPQDARAEAESPGGASESDQDGGHESPPKKKAVAWVSAKNPAP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 MRKKKKVSLGPVSYVLVDSEDGRKKPVMPKKGPGSRREASDQKAPRGQQPAEATASTSRG
       ::::::                                                      
CCDS46 MRKKKKNPERFDLGDHPY                                          
              370                                                  

>>CCDS9818.1 PNMA1 gene_id:9240|Hs108|chr14               (353 aa)
 initn: 490 init1: 307 opt: 508  Z-score: 401.3  bits: 83.1 E(32554): 4.9e-16
Smith-Waterman score: 508; 52.3% identity (78.1% similar) in 155 aa overlap (5-159:1-150)

               10        20        30        40        50        60
pF1KE0 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
           :::.:::::::::.:. .:.::: ::: .: .:::::::.... :   :: :...:
CCDS98     MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMF
                   10        20        30        40         50     

               70        80        90       100       110       120
pF1KE0 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
        ::::.::::.:.  .:. ..::::.::.::::.:. . ::.:::::. :. ::  :: :
CCDS98 WREENAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWT
          60        70        80        90       100       110     

              130       140       150       160       170       180
pF1KE0 WEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAA
        .::.:.: ...:: . .    ::  :: :. .:  :.:                     
CCDS98 VQDVARVLGFQNPTPTPG----PEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPG
         120       130           140       150       160       170 

              190       200       210       220       230       240
pF1KE0 EFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKSR
                                                                   
CCDS98 PGEETFDPWLEHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLK
             180       190       200       210       220       230 

>>CCDS9908.1 MOAP1 gene_id:64112|Hs108|chr14              (351 aa)
 initn: 475 init1: 475 opt: 478  Z-score: 378.6  bits: 78.9 E(32554): 9.1e-15
Smith-Waterman score: 478; 38.7% identity (69.1% similar) in 194 aa overlap (5-197:1-193)

               10        20        30        40        50        60
pF1KE0 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
           :.. :::::::::... ...::..:: ..:. :::::.:.. :.::: :: :...:
CCDS99     MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMF
                   10        20        30        40        50      

               70        80        90       100       110       120
pF1KE0 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
        :.:: :.::. .   .. . .:.:.::.::.:::. . :  :  ::. ::::: .:: :
CCDS99 RRDENRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMT
         60        70        80        90       100       110      

              130       140       150       160        170         
pF1KE0 WEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMD-AEIRSREEARAQEA
         .. : :  .. .:. .: . :: ::  :.  : :.   . :.   ..:     .. : 
CCDS99 VGELSRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEP
        120       130       140       150       160       170      

     180       190       200       210       220       230         
pF1KE0 AEFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKS
       .: ::.. : . . . .:                                          
CCDS99 GE-EEFGRWMFHTTQMIKAWQVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQ
         180       190       200       210       220       230     

>>CCDS34868.1 PNMA2 gene_id:10687|Hs108|chr8              (364 aa)
 initn: 460 init1: 460 opt: 460  Z-score: 364.8  bits: 76.4 E(32554): 5.4e-14
Smith-Waterman score: 460; 41.3% identity (64.7% similar) in 201 aa overlap (5-205:1-201)

               10        20        30        40        50        60
pF1KE0 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
           ::. ::::::: : :: ..::.::::: :  .:::.:.:. .:. :: :: :.:::
CCDS34     MALALLEDWCRIMSVDEQKSLMVTGIPADFEEAEIQEVLQETLKSLGRYRLLGKIF
                   10        20        30        40        50      

               70        80        90       100       110       120
pF1KE0 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
        ..::..:.:.:. : ...:.:: :  :.::::.:. . :.::.:::. :: ::. ::.:
CCDS34 RKQENANAVLLELLEDTDVSAIPSEVQGKGGVWKVIFKTPNQDTEFLERLNLFLEKEGQT
         60        70        80        90       100       110      

              130       140       150       160       170       180
pF1KE0 WEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAA
          . : :  .  . .      ::  :. ::  .. . : .. :  .      . :  : 
CCDS34 VSGMFRALGQEGVSPATVPCISPELLAHLLGQAMAHAPQPLLPMRYRKLRVFSGSAVPAP
        120       130       140       150       160       170      

              190       200       210       220       230       240
pF1KE0 EFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKSR
       : : . .:   : . ::. :   ::                                   
CCDS34 EEESFEVWLEQATEIVKEWPVTEAEKKRWLAESLRGPALDLMHIVQADNPSISVEECLEA
        180       190       200       210       220       230      

>>CCDS65344.1 PNMA3 gene_id:29944|Hs108|chrX              (455 aa)
 initn: 450 init1: 419 opt: 441  Z-score: 349.0  bits: 73.8 E(32554): 4.1e-13
Smith-Waterman score: 448; 34.2% identity (63.5% similar) in 222 aa overlap (5-212:1-222)

               10        20        30        40        50        60
pF1KE0 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
           : ..::.::::: ... .: .:. :::::::. :.::::. .   :: ::.....:
CCDS65     MPLTLLQDWCRGEHLNTRRCMLILGIPEDCGEDEFEETLQEACRHLGRYRVIGRMF
                   10        20        30        40        50      

               70        80        90       100       110       120
pF1KE0 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
        ::::..: :.:... .. . .:::.::.:: :.:. .  ..:.:::. ::.::. : ::
CCDS65 RREENAQAILLELAQDIDYALLPREIPGKGGPWEVIVKPRNSDGEFLNRLNRFLEEERRT
         60        70        80        90       100       110      

              130       140         150       160       170        
pF1KE0 WEDVVRLLQLNHPTLSQNQHQPPE--NWAEALGVLLGAVVQIIFCMDAEIRSREEARAQE
         :. :.:  .    .      ::  .::..::. .  ... ..  . .. : .      
CCDS65 VSDMNRVLGSDTNCSAPRVTISPEFWTWAQTLGAAVQPLLEQMLYRELRVFSGNTISIPG
        120       130       140       150       160       170      

      180               190       200           210       220      
pF1KE0 AAEF--------EEMAAWALAAGRKVKKEP----GLAAEVGSALKAETPNNWNATEDQHE
       :  :        : .  : .  :.: ..      : : .: :.:.:              
CCDS65 ALAFDAWLEHTTEMLQMWQVPEGEKRRRLMECLRGPALQVVSGLRASNASITVEECLAAL
        180       190       200       210       220       230      

        230       240       250       260       270       280      
pF1KE0 PTKPLVRRAGAKSRSRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEVGDAESMAISE
                                                                   
CCDS65 QQVFGPVESHKIAQVKLCKAYQEAGEKVSSFVLRLEPLLQRAVENNVVSRRNVNQTRLKR
        240       250       260       270       280       290      

>>CCDS35435.2 PNMA3 gene_id:29944|Hs108|chrX              (463 aa)
 initn: 450 init1: 419 opt: 441  Z-score: 348.9  bits: 73.8 E(32554): 4.1e-13
Smith-Waterman score: 448; 34.2% identity (63.5% similar) in 222 aa overlap (5-212:1-222)

               10        20        30        40        50        60
pF1KE0 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
           : ..::.::::: ... .: .:. :::::::. :.::::. .   :: ::.....:
CCDS35     MPLTLLQDWCRGEHLNTRRCMLILGIPEDCGEDEFEETLQEACRHLGRYRVIGRMF
                   10        20        30        40        50      

               70        80        90       100       110       120
pF1KE0 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
        ::::..: :.:... .. . .:::.::.:: :.:. .  ..:.:::. ::.::. : ::
CCDS35 RREENAQAILLELAQDIDYALLPREIPGKGGPWEVIVKPRNSDGEFLNRLNRFLEEERRT
         60        70        80        90       100       110      

              130       140         150       160       170        
pF1KE0 WEDVVRLLQLNHPTLSQNQHQPPE--NWAEALGVLLGAVVQIIFCMDAEIRSREEARAQE
         :. :.:  .    .      ::  .::..::. .  ... ..  . .. : .      
CCDS35 VSDMNRVLGSDTNCSAPRVTISPEFWTWAQTLGAAVQPLLEQMLYRELRVFSGNTISIPG
        120       130       140       150       160       170      

      180               190       200           210       220      
pF1KE0 AAEF--------EEMAAWALAAGRKVKKEP----GLAAEVGSALKAETPNNWNATEDQHE
       :  :        : .  : .  :.: ..      : : .: :.:.:              
CCDS35 ALAFDAWLEHTTEMLQMWQVPEGEKRRRLMECLRGPALQVVSGLRASNASITVEECLAAL
        180       190       200       210       220       230      

        230       240       250       260       270       280      
pF1KE0 PTKPLVRRAGAKSRSRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEVGDAESMAISE
                                                                   
CCDS35 QQVFGPVESHKIAQVKLCKAYQEAGEKVSSFVLRLEPLLQRAVENNVVSRRNVNQTRLKR
        240       250       260       270       280       290      

>>CCDS14718.1 PNMA5 gene_id:114824|Hs108|chrX             (448 aa)
 initn: 459 init1: 432 opt: 432  Z-score: 342.2  bits: 72.5 E(32554): 9.6e-13
Smith-Waterman score: 435; 41.5% identity (73.2% similar) in 164 aa overlap (5-155:1-164)

               10        20        30        40        50        60
pF1KE0 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
           ::..::::::.::..: ...::..::: .:...::..:... :.::  ::.:...:
CCDS14     MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMF
                   10        20        30        40        50      

               70        80        90       100       110       120
pF1KE0 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
        ::.:.::..::... :: .:.: ..::.:: :.:: .  . : :::. :: ::  :::.
CCDS14 RREDNAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRS
         60        70        80        90       100       110      

                      130       140            150       160       
pF1KE0 WEDVVRLL--------QLNHPTLSQNQH---QPPEN--WAEALGVLLGAVVQIIFCMDAE
         ::.: :        .:.  .. : .    .::..  : . : :. :            
CCDS14 MTDVARALGCCSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEETFE
        120       130       140       150       160       170      

       170       180       190       200       210       220       
pF1KE0 IRSREEARAQEAAEFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEP
                                                                   
CCDS14 DWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIFG
        180       190       200       210       220       230      




439 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 06:09:15 2016 done: Thu Nov  3 06:09:16 2016
 Total Scan time:  3.450 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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